RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 NPAP1Q9NZP6 1156 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 SERTAD3Q9UJW9 196 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 SNAPINO95295 136 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 IL1AP01583 271 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 TPT1P13693 172 aaKnown RBP12.4□□□□□ -0.42
RNF43-208ENST00000584437 PBX2P40425 430 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 RGS6P49758 472 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 TRIM46Q7Z4K8 759 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 NRMQ8IXM6 262 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 B3GNT7Q8NFL0 401 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 OR1J4Q8NGS1 313 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 GPR150Q8NGU9 434 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 RAB3DO95716 219 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 F2P00734 622 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 SLC5A2P31639 672 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 ETV3P41162 512 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 RPS15AP62244 130 aaKnown RBP12.4□□□□□ -0.42
RNF43-208ENST00000584437 HES5Q5TA89 166 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 SIMC1Q8NDZ2 872 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 ZNF417Q8TAU3 575 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 DCUN1D4Q92564 292 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 IGSF8Q969P0 613 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 DKKL1Q9UK85 242 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 LEFTY2O00292 366 aa12.4□□□□□ -0.43
RNF43-208ENST00000584437 THEGLP0DJG4 465 aa12.4□□□□□ -0.43
RNF43-208ENST00000584437 IL32P24001 234 aa12.4□□□□□ -0.43
RNF43-208ENST00000584437 CD6P30203 668 aa12.4□□□□□ -0.43
RNF43-208ENST00000584437 AQP2P41181 271 aa12.4□□□□□ -0.43
RNF43-208ENST00000584437 PARP16Q8N5Y8 322 aa12.4□□□□□ -0.43
RNF43-208ENST00000584437 CCDC71LQ8N9Z2 235 aa12.4□□□□□ -0.43
RNF43-208ENST00000584437 OR9Q2Q8NGE9 314 aa12.4□□□□□ -0.43
RNF43-208ENST00000584437 OR5W2Q8NH69 310 aa12.4□□□□□ -0.43
RNF43-208ENST00000584437 STK35Q8TDR2 534 aa12.4□□□□□ -0.43
RNF43-208ENST00000584437 SPIN2AQ99865 258 aa12.4□□□□□ -0.43
RNF43-208ENST00000584437 SPIN2BQ9BPZ2 258 aa12.4□□□□□ -0.43
RNF43-208ENST00000584437 SLC12A9Q9BXP2 914 aa12.4□□□□□ -0.43
RNF43-208ENST00000584437 ARHGAP39Q9C0H5 1083 aa12.4□□□□□ -0.43
RNF43-208ENST00000584437 BRF2Q9HAW0 419 aa12.4□□□□□ -0.43
RNF43-208ENST00000584437 QPCTLQ9NXS2 382 aa12.4□□□□□ -0.43
RNF43-208ENST00000584437 KCNS2Q9ULS6 477 aa12.4□□□□□ -0.43
RNF43-208ENST00000584437 A0A1W2PQ09 198 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 PRAMEF2O60811 474 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 AKAIN1P0CW23 69 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 HOXB9P17482 250 aaPredicted RBP12.39□□□□□ -0.43
RNF43-208ENST00000584437 ZNF252P-AS1Q0IIN9 211 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 GKN2Q86XP6 184 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 ESX1Q8N693 406 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 FN3KQ9H479 309 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 KCNK12Q9HB15 430 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 FAM86C1Q9NVL1 165 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 GPR52Q9Y2T5 361 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 CAMTA1Q9Y6Y1 1673 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 LEFTY1O75610 366 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 GNSP15586 552 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 GMPRP36959 345 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 PGGT1BP53609 377 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 TMPRSS9Q7Z410 1059 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 GALNT10Q86SR1 603 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 NAGSQ8N159 534 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 OR5D16Q8NGK9 328 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 MAL2Q969L2 176 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 WDR77Q9BQA1 342 aaPredicted RBP12.39□□□□□ -0.43
RNF43-208ENST00000584437 HERPUD2Q9BSE4 406 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 KCNJ16Q9NPI9 418 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 LRFN1Q9P244 771 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 CYP8B1Q9UNU6 501 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 ICKQ9UPZ9 632 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 GKP32189 559 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 SLC11A1P49279 550 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 IDH3GP51553 393 aaPredicted RBP12.39□□□□□ -0.43
RNF43-208ENST00000584437 MC2RQ01718 297 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 MFSD13AQ14CX5 517 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 GTDC1Q4AE62 458 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 COMMD6Q7Z4G1 85 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 DNAJC22Q8N4W6 341 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 IQCF1Q8N6M8 205 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 ADAMTS14Q8WXS8 1223 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 MALSU1Q96EH3 234 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 MSLNLQ96KJ4 702 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 MAN2C1Q9NTJ4 1040 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 ZNF175Q9Y473 711 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 A0A0A6YYH2 397 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 TEX51A0A1B0GUA7 166 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 A6NJ64 397 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 ARPC1BO15143 372 aaKnown RBP12.39□□□□□ -0.43
RNF43-208ENST00000584437 COCHO43405 550 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 ZNF35P13682 527 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 IFNGR1P15260 489 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 POLR2CP19387 275 aaPredicted RBP12.39□□□□□ -0.43
RNF43-208ENST00000584437 PLGLB1Q02325 96 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 SGCAQ16586 387 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 KIAA0319Q5VV43 1072 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 LARP4Q71RC2 724 aaKnown RBP eCLIP12.39□□□□□ -0.43
RNF43-208ENST00000584437 ERN2Q76MJ5 926 aaKnown RBP12.39□□□□□ -0.43
RNF43-208ENST00000584437 SHFQ7M4L6 423 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 ZNF587Q96SQ5 575 aaPredicted RBP12.39□□□□□ -0.43
RNF43-208ENST00000584437 FZD3Q9NPG1 666 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 SLC45A1Q9Y2W3 748 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 WNT6Q9Y6F9 365 aa12.39□□□□□ -0.43
RNF43-208ENST00000584437 RNASET2O00584 256 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms