RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	ZNF665	Q9H7R5	613 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	ZMAT4	Q9H898	229 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	MARCH7	Q9H992	704 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	EIF2B3	Q9NR50	452 aa	Known RBP	4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	FAM114A2	Q9NRY5	505 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	SIRT3	Q9NTG7	399 aa	Predicted RBP	4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	CTTNBP2NL	Q9P2B4	639 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	XPR1	Q9UBH6	696 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	FBLN5	Q9UBX5	448 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	TSR3	Q9UJK0	312 aa	Known RBP	4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	PLA2G2D	Q9UNK4	145 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	SHOC2	Q9UQ13	582 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	SNX24	Q9Y343	169 aa		4.24	□□□□□ -1.73
MSI2-216	ENST00000582772	MDFIC2	A0A1B0GVS7	189 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	SYNDIG1L	A6NDD5	238 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	AGAP14	A8MT82	685 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	MIF4GD	A9UHW6	222 aa	Known RBP	4.23	□□□□□ -1.73
MSI2-216	ENST00000582772		H0YHG0	523 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	SGK494	L7N484	410 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	ZNF432	O94892	652 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	FBXO45	P0C2W1	286 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	CCDC172	P0C7W6	258 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	GZMA	P12544	262 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	IL1RN	P18510	177 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	UGT1A6	P19224	532 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	DRD4	P21917	467 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	ACHE	P22303	614 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	IVD	P26440	423 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	HPD	P32754	393 aa	Predicted RBP	4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	CTNNA1	P35221	906 aa	Known RBP	4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	COIL	P38432	576 aa	Predicted RBP	4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	KCNJ1	P48048	391 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	FNTA	P49354	379 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	GAS1	P54826	345 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	B3GALT5-AS1	P59052	145 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	TPI1	P60174	286 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	RNF4	P78317	190 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	IFI35	P80217	286 aa	Predicted RBP	4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	NTRK2	Q16620	822 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	C2CD6	Q53TS8	623 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	HECTD2	Q5U5R9	776 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	TIGD3	Q6B0B8	471 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	AAGAB	Q6PD74	315 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	C6orf89	Q6UWU4	347 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	FRRS1	Q6ZNA5	592 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	YRDC	Q86U90	279 aa	Known RBP	4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	IFNE	Q86WN2	208 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	TDRP	Q86YL5	185 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	OR10G3	Q8NGC4	313 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	OR5L2	Q8NGL0	311 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	NUBPL	Q8TB37	319 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	FNDC9	Q8TBE3	224 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	FBXO25	Q8TCJ0	367 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	C1orf54	Q8WWF1	131 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	RAPGEF5	Q92565	580 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	MAGOHB	Q96A72	148 aa	Known RBP	4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	LRRC45	Q96CN5	670 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	COQ8B	Q96D53	544 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	DNAJA3	Q96EY1	480 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	RILP	Q96NA2	401 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	FICD	Q9BVA6	458 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	VPS37B	Q9H9H4	285 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	SAE1	Q9UBE0	346 aa	Predicted RBP	4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	SEC14L4	Q9UDX3	406 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	PCYOX1	Q9UHG3	505 aa		4.23	□□□□□ -1.73
MSI2-216	ENST00000582772	R3HDM2	Q9Y2K5	976 aa	Known RBP	4.23	□□□□□ -1.73
MSI2-216	ENST00000582772		A0A087WUV0	522 aa	Predicted RBP	4.22	□□□□□ -1.73
MSI2-216	ENST00000582772	IGKV1-8	A0A0C4DH67	115 aa		4.22	□□□□□ -1.73
MSI2-216	ENST00000582772	GLYATL1P3	A0A0U1RQE8	302 aa		4.22	□□□□□ -1.73
MSI2-216	ENST00000582772	LIN7A	O14910	233 aa	Predicted RBP	4.22	□□□□□ -1.73
MSI2-216	ENST00000582772	STK10	O94804	968 aa	Known RBP	4.22	□□□□□ -1.73
MSI2-216	ENST00000582772	ZNF17	P17021	662 aa		4.22	□□□□□ -1.73
MSI2-216	ENST00000582772	CHRM3	P20309	590 aa		4.22	□□□□□ -1.73
MSI2-216	ENST00000582772	MAOA	P21397	527 aa		4.22	□□□□□ -1.73
MSI2-216	ENST00000582772	PSMB5	P28074	263 aa		4.22	□□□□□ -1.73
MSI2-216	ENST00000582772	SDC4	P31431	198 aa		4.22	□□□□□ -1.73
MSI2-216	ENST00000582772	CDH5	P33151	784 aa	Predicted RBP	4.22	□□□□□ -1.73
MSI2-216	ENST00000582772	PLTP	P55058	493 aa		4.22	□□□□□ -1.73
MSI2-216	ENST00000582772	TMEM33	P57088	247 aa		4.22	□□□□□ -1.73
MSI2-216	ENST00000582772	TAS2R40	P59535	323 aa		4.22	□□□□□ -1.73
MSI2-216	ENST00000582772	MAGOH	P61326	146 aa	Known RBP	4.22	□□□□□ -1.73
MSI2-216	ENST00000582772	BTG2	P78543	158 aa		4.22	□□□□□ -1.73
MSI2-216	ENST00000582772	POU3F1	Q03052	451 aa	Predicted RBP	4.22	□□□□□ -1.73
MSI2-216	ENST00000582772	PPID	Q08752	370 aa	Known RBP	4.22	□□□□□ -1.73
MSI2-216	ENST00000582772	HYAL2	Q12891	473 aa		4.22	□□□□□ -1.73
MSI2-216	ENST00000582772	ITGAD	Q13349	1161 aa		4.22	□□□□□ -1.73
MSI2-216	ENST00000582772	DHX34	Q14147	1143 aa	Known RBP	4.22	□□□□□ -1.73
MSI2-216	ENST00000582772	CDO1	Q16878	200 aa		4.22	□□□□□ -1.73
MSI2-216	ENST00000582772	KRT71	Q3SY84	523 aa		4.22	□□□□□ -1.73
MSI2-216	ENST00000582772	TNFAIP8L3	Q5GJ75	292 aa		4.22	□□□□□ -1.73
MSI2-216	ENST00000582772	PHYHD1	Q5SRE7	291 aa		4.22	□□□□□ -1.73
MSI2-216	ENST00000582772	MON1B	Q7L1V2	547 aa		4.22	□□□□□ -1.73
MSI2-216	ENST00000582772	CARM1	Q86X55	608 aa		4.22	□□□□□ -1.73
MSI2-216	ENST00000582772	RIBC1	Q8N443	379 aa	Predicted RBP	4.22	□□□□□ -1.73
MSI2-216	ENST00000582772	TOR1AIP2	Q8NFQ8	470 aa		4.22	□□□□□ -1.73
MSI2-216	ENST00000582772	SSMEM1	Q8WWF3	244 aa		4.22	□□□□□ -1.73
MSI2-216	ENST00000582772	CPA5	Q8WXQ8	436 aa		4.22	□□□□□ -1.73
MSI2-216	ENST00000582772	MUCL1	Q96DR8	90 aa		4.22	□□□□□ -1.73
MSI2-216	ENST00000582772	FAR2	Q96K12	515 aa		4.22	□□□□□ -1.73
MSI2-216	ENST00000582772	FAM71F1	Q96KD3	344 aa	Predicted RBP	4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms