RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 RPRMLQ8N4K4 120 aa17.84■□□□□ 0.45
SREBF1-220ENST00000581707 OR6Y1Q8NGX8 325 aa17.84■□□□□ 0.45
SREBF1-220ENST00000581707 CA5BP1Q8WTZ4 195 aa17.84■□□□□ 0.45
SREBF1-220ENST00000581707 RND1Q92730 232 aa17.84■□□□□ 0.45
SREBF1-220ENST00000581707 MARVELD3Q96A59 401 aa17.84■□□□□ 0.45
SREBF1-220ENST00000581707 TSSK3Q96PN8 268 aa17.84■□□□□ 0.45
SREBF1-220ENST00000581707 BAIAP2L1Q9UHR4 511 aa17.84■□□□□ 0.45
SREBF1-220ENST00000581707 C19orf53Q9UNZ5 99 aaPredicted RBP17.84■□□□□ 0.45
SREBF1-220ENST00000581707 C15orf41Q9Y2V0 281 aa17.84■□□□□ 0.45
SREBF1-220ENST00000581707 PKDREJQ9NTG1 2253 aa17.83■□□□□ 0.45
SREBF1-220ENST00000581707 GNB5O14775 395 aa17.83■□□□□ 0.44
SREBF1-220ENST00000581707 AKAP10O43572 662 aa17.83■□□□□ 0.44
SREBF1-220ENST00000581707 ABCB7O75027 752 aa17.83■□□□□ 0.44
SREBF1-220ENST00000581707 ELAVL4P26378 380 aaKnown RBP17.83■□□□□ 0.44
SREBF1-220ENST00000581707 KRT20P35900 424 aa17.83■□□□□ 0.44
SREBF1-220ENST00000581707 CDK9P50750 372 aaKnown RBP17.83■□□□□ 0.44
SREBF1-220ENST00000581707 CEP85LQ5SZL2 805 aa17.83■□□□□ 0.44
SREBF1-220ENST00000581707 ANGPTL8Q6UXH0 198 aa17.83■□□□□ 0.44
SREBF1-220ENST00000581707 ACAD11Q709F0 780 aa17.83■□□□□ 0.44
SREBF1-220ENST00000581707 EXOC3L1Q86VI1 746 aa17.83■□□□□ 0.44
SREBF1-220ENST00000581707 OR1J4Q8NGS1 313 aa17.83■□□□□ 0.44
SREBF1-220ENST00000581707 TMCO6Q96DC7 493 aa17.83■□□□□ 0.44
SREBF1-220ENST00000581707 ELP4Q96EB1 424 aa17.83■□□□□ 0.44
SREBF1-220ENST00000581707 ADOQ96SZ5 270 aa17.83■□□□□ 0.44
SREBF1-220ENST00000581707 OSBPL11Q9BXB4 747 aa17.83■□□□□ 0.44
SREBF1-220ENST00000581707 UBQLN3Q9H347 655 aa17.83■□□□□ 0.44
SREBF1-220ENST00000581707 CENPHQ9H3R5 247 aa17.83■□□□□ 0.44
SREBF1-220ENST00000581707 REEP4Q9H6H4 257 aa17.83■□□□□ 0.44
SREBF1-220ENST00000581707 GALNT9Q9HCQ5 603 aa17.83■□□□□ 0.44
SREBF1-220ENST00000581707 SSU72Q9NP77 194 aaKnown RBP17.83■□□□□ 0.44
SREBF1-220ENST00000581707 KLRF1Q9NZS2 232 aa17.83■□□□□ 0.44
SREBF1-220ENST00000581707 ZDHHC2Q9UIJ5 367 aa17.83■□□□□ 0.44
SREBF1-220ENST00000581707 OR10H1Q9Y4A9 318 aa17.83■□□□□ 0.44
SREBF1-220ENST00000581707 C2orf72A6NCS6 295 aa17.82■□□□□ 0.44
SREBF1-220ENST00000581707 PRAMEF25A6NGN4 478 aa17.82■□□□□ 0.44
SREBF1-220ENST00000581707 UPK1AO00322 258 aa17.82■□□□□ 0.44
SREBF1-220ENST00000581707 TSPAN2O60636 221 aa17.82■□□□□ 0.44
SREBF1-220ENST00000581707 WDR1O75083 606 aa17.82■□□□□ 0.44
SREBF1-220ENST00000581707 HPNP05981 417 aa17.82■□□□□ 0.44
SREBF1-220ENST00000581707 BCKDHAP12694 445 aa17.82■□□□□ 0.44
SREBF1-220ENST00000581707 IL12BP29460 328 aa17.82■□□□□ 0.44
SREBF1-220ENST00000581707 PTGDSP41222 190 aa17.82■□□□□ 0.44
SREBF1-220ENST00000581707 ASMTP46597 345 aa17.82■□□□□ 0.44
SREBF1-220ENST00000581707 SERPINB4P48594 390 aa17.82■□□□□ 0.44
SREBF1-220ENST00000581707 NUP107P57740 925 aa17.82■□□□□ 0.44
SREBF1-220ENST00000581707 ZNF155Q12901 538 aaPredicted RBP17.82■□□□□ 0.44
SREBF1-220ENST00000581707 EFR3AQ14156 821 aa17.82■□□□□ 0.44
SREBF1-220ENST00000581707 TOMM20Q15388 145 aa17.82■□□□□ 0.44
SREBF1-220ENST00000581707 ANKRD26P1Q6NSI1 321 aa17.82■□□□□ 0.44
SREBF1-220ENST00000581707 LARP4Q71RC2 724 aaKnown RBP eCLIP17.82■□□□□ 0.44
SREBF1-220ENST00000581707 ZNF551Q7Z340 670 aaPredicted RBP17.82■□□□□ 0.44
SREBF1-220ENST00000581707 OR2L13Q8N349 312 aa17.82■□□□□ 0.44
SREBF1-220ENST00000581707 CLHC1Q8NHS4 586 aa17.82■□□□□ 0.44
SREBF1-220ENST00000581707 PPP1R14CQ8TAE6 165 aa17.82■□□□□ 0.44
SREBF1-220ENST00000581707 ASB5Q8WWX0 329 aa17.82■□□□□ 0.44
SREBF1-220ENST00000581707 PPCDCQ96CD2 204 aa17.82■□□□□ 0.44
SREBF1-220ENST00000581707 SLC35A4Q96G79 324 aa17.82■□□□□ 0.44
SREBF1-220ENST00000581707 ZNF764Q96H86 408 aaPredicted RBP17.82■□□□□ 0.44
SREBF1-220ENST00000581707 PKNOX2Q96KN3 472 aa17.82■□□□□ 0.44
SREBF1-220ENST00000581707 PPP3R2Q96LZ3 170 aa17.82■□□□□ 0.44
SREBF1-220ENST00000581707 ZIM3Q96PE6 472 aa17.82■□□□□ 0.44
SREBF1-220ENST00000581707 RUBCNLQ9H714 662 aa17.82■□□□□ 0.44
SREBF1-220ENST00000581707 DDX18Q9NVP1 670 aaKnown RBP17.82■□□□□ 0.44
SREBF1-220ENST00000581707 ALKBH4Q9NXW9 302 aa17.82■□□□□ 0.44
SREBF1-220ENST00000581707 SH3BP4Q9P0V3 963 aa17.82■□□□□ 0.44
SREBF1-220ENST00000581707 C15orf38-AP3S2A0A0A6YYH1 394 aa17.81■□□□□ 0.44
SREBF1-220ENST00000581707 WDR91A4D1P6 747 aa17.81■□□□□ 0.44
SREBF1-220ENST00000581707 PDPK1O15530 556 aa17.81■□□□□ 0.44
SREBF1-220ENST00000581707 TBX19O60806 448 aa17.81■□□□□ 0.44
SREBF1-220ENST00000581707 PEX11AO75192 247 aa17.81■□□□□ 0.44
SREBF1-220ENST00000581707 HOXD4P09016 255 aaPredicted RBP17.81■□□□□ 0.44
SREBF1-220ENST00000581707 PTPN6P29350 595 aa17.81■□□□□ 0.44
SREBF1-220ENST00000581707 CHRNB4P30926 498 aa17.81■□□□□ 0.44
SREBF1-220ENST00000581707 PNLIPRP2P54317 469 aa17.81■□□□□ 0.44
SREBF1-220ENST00000581707 PSG6Q00889 435 aa17.81■□□□□ 0.44
SREBF1-220ENST00000581707 HSPB3Q12988 150 aa17.81■□□□□ 0.44
SREBF1-220ENST00000581707 XKR7Q5GH72 579 aa17.81■□□□□ 0.44
SREBF1-220ENST00000581707 C1orf185Q5T7R7 199 aa17.81■□□□□ 0.44
SREBF1-220ENST00000581707 RTL6Q6ICC9 239 aa17.81■□□□□ 0.44
SREBF1-220ENST00000581707 B3GNT6Q6ZMB0 384 aa17.81■□□□□ 0.44
SREBF1-220ENST00000581707 CROCCP2Q86T23 111 aa17.81■□□□□ 0.44
SREBF1-220ENST00000581707 OR4N2Q8NGD1 307 aa17.81■□□□□ 0.44
SREBF1-220ENST00000581707 CIDECQ96AQ7 238 aaPredicted RBP17.81■□□□□ 0.44
SREBF1-220ENST00000581707 ZBTB9Q96C00 473 aa17.81■□□□□ 0.44
SREBF1-220ENST00000581707 TTYH2Q9BSA4 534 aa17.81■□□□□ 0.44
SREBF1-220ENST00000581707 GIMAP2Q9UG22 337 aa17.81■□□□□ 0.44
SREBF1-220ENST00000581707 RNF6Q9Y252 685 aa17.81■□□□□ 0.44
SREBF1-220ENST00000581707 FAM215AQ9Y5M1 114 aa17.81■□□□□ 0.44
SREBF1-220ENST00000581707 ABCA12Q86UK0 2595 aa17.8■□□□□ 0.44
SREBF1-220ENST00000581707 TMEM114B3SHH9 223 aa17.8■□□□□ 0.44
SREBF1-220ENST00000581707 SNPHO15079 494 aa17.8■□□□□ 0.44
SREBF1-220ENST00000581707 TM9SF1O15321 606 aa17.8■□□□□ 0.44
SREBF1-220ENST00000581707 BIRC5O15392 142 aa17.8■□□□□ 0.44
SREBF1-220ENST00000581707 PSMG1O95456 288 aa17.8■□□□□ 0.44
SREBF1-220ENST00000581707 IFI6P09912 130 aa17.8■□□□□ 0.44
SREBF1-220ENST00000581707 GLI4P10075 376 aa17.8■□□□□ 0.44
SREBF1-220ENST00000581707 GABRA1P14867 456 aa17.8■□□□□ 0.44
SREBF1-220ENST00000581707 MAPK1P28482 360 aa17.8■□□□□ 0.44
SREBF1-220ENST00000581707 MRPS22P82650 360 aaKnown RBP17.8■□□□□ 0.44
SREBF1-220ENST00000581707 PDE7AQ13946 482 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms