RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 UBE2E3Q969T4 207 aa12.38□□□□□ -0.43
CSNK1D-219ENST00000581660 RGMAQ96B86 450 aa12.38□□□□□ -0.43
CSNK1D-219ENST00000581660 ZNF717Q9BY31 904 aaPredicted RBP12.38□□□□□ -0.43
CSNK1D-219ENST00000581660 CNOT10Q9H9A5 744 aaKnown RBP12.38□□□□□ -0.43
CSNK1D-219ENST00000581660 LYARQ9NX58 379 aaKnown RBP12.38□□□□□ -0.43
CSNK1D-219ENST00000581660 SNX8Q9Y5X2 465 aa12.38□□□□□ -0.43
CSNK1D-219ENST00000581660 NOTCH1P46531 2555 aa12.38□□□□□ -0.43
CSNK1D-219ENST00000581660 SLC35F4A4IF30 521 aa12.37□□□□□ -0.43
CSNK1D-219ENST00000581660 OR6C70A6NIJ9 312 aa12.37□□□□□ -0.43
CSNK1D-219ENST00000581660 LINC01387J3KSC0 135 aa12.37□□□□□ -0.43
CSNK1D-219ENST00000581660 PLPP1O14494 284 aa12.37□□□□□ -0.43
CSNK1D-219ENST00000581660 TO15178 435 aa12.37□□□□□ -0.43
CSNK1D-219ENST00000581660 SS18L1O75177 396 aaPredicted RBP12.37□□□□□ -0.43
CSNK1D-219ENST00000581660 SH3BGRLO75368 114 aa12.37□□□□□ -0.43
CSNK1D-219ENST00000581660 DSCR4P56555 118 aaPredicted RBP12.37□□□□□ -0.43
CSNK1D-219ENST00000581660 TGFBIQ15582 683 aa12.37□□□□□ -0.43
CSNK1D-219ENST00000581660 MSS51Q4VC12 460 aa12.37□□□□□ -0.43
CSNK1D-219ENST00000581660 CDKL4Q5MAI5 379 aa12.37□□□□□ -0.43
CSNK1D-219ENST00000581660 OR52E8Q6IFG1 317 aa12.37□□□□□ -0.43
CSNK1D-219ENST00000581660 SEZ6L2Q6UXD5 910 aa12.37□□□□□ -0.43
CSNK1D-219ENST00000581660 IGDCC3Q8IVU1 814 aa12.37□□□□□ -0.43
CSNK1D-219ENST00000581660 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.37□□□□□ -0.43
CSNK1D-219ENST00000581660 STEAP2Q8NFT2 490 aa12.37□□□□□ -0.43
CSNK1D-219ENST00000581660 PROX1Q92786 737 aa12.37□□□□□ -0.43
CSNK1D-219ENST00000581660 S100PBPQ96BU1 408 aa12.37□□□□□ -0.43
CSNK1D-219ENST00000581660 TMCO6Q96DC7 493 aa12.37□□□□□ -0.43
CSNK1D-219ENST00000581660 C1orf159Q96HA4 380 aa12.37□□□□□ -0.43
CSNK1D-219ENST00000581660 GMPPAQ96IJ6 420 aaPredicted RBP12.37□□□□□ -0.43
CSNK1D-219ENST00000581660 LCORQ96JN0 433 aaPredicted RBP12.37□□□□□ -0.43
CSNK1D-219ENST00000581660 ADAD1Q96M93 576 aaKnown RBP12.37□□□□□ -0.43
CSNK1D-219ENST00000581660 ITPAQ9BY32 194 aa12.37□□□□□ -0.43
CSNK1D-219ENST00000581660 OR51B5Q9H339 312 aa12.37□□□□□ -0.43
CSNK1D-219ENST00000581660 NGBQ9NPG2 151 aa12.37□□□□□ -0.43
CSNK1D-219ENST00000581660 FAIMQ9NVQ4 179 aa12.37□□□□□ -0.43
CSNK1D-219ENST00000581660 CTNNAL1Q9UBT7 734 aa12.37□□□□□ -0.43
CSNK1D-219ENST00000581660 CFL2Q9Y281 166 aa12.37□□□□□ -0.43
CSNK1D-219ENST00000581660 A0A0A6YYD5 115 aa12.36□□□□□ -0.43
CSNK1D-219ENST00000581660 TMPRSS11DO60235 418 aa12.36□□□□□ -0.43
CSNK1D-219ENST00000581660 STK16O75716 305 aa12.36□□□□□ -0.43
CSNK1D-219ENST00000581660 TTC4O95801 387 aa12.36□□□□□ -0.43
CSNK1D-219ENST00000581660 USF1P22415 310 aaPredicted RBP12.36□□□□□ -0.43
CSNK1D-219ENST00000581660 TCEA1P23193 301 aaKnown RBP12.36□□□□□ -0.43
CSNK1D-219ENST00000581660 GRK2P25098 689 aa12.36□□□□□ -0.43
CSNK1D-219ENST00000581660 ADH6P28332 368 aa12.36□□□□□ -0.43
CSNK1D-219ENST00000581660 COMPP49747 757 aaPredicted RBP12.36□□□□□ -0.43
CSNK1D-219ENST00000581660 NEK2P51955 445 aa12.36□□□□□ -0.43
CSNK1D-219ENST00000581660 RAP1GDS1P52306 607 aa12.36□□□□□ -0.43
CSNK1D-219ENST00000581660 GAS1P54826 345 aa12.36□□□□□ -0.43
CSNK1D-219ENST00000581660 IRX1P78414 480 aaPredicted RBP12.36□□□□□ -0.43
CSNK1D-219ENST00000581660 IRF8Q02556 426 aa12.36□□□□□ -0.43
CSNK1D-219ENST00000581660 CHIT1Q13231 466 aa12.36□□□□□ -0.43
CSNK1D-219ENST00000581660 CTU2Q2VPK5 515 aaKnown RBP12.36□□□□□ -0.43
CSNK1D-219ENST00000581660 HP1BP3Q5SSJ5 553 aaPredicted RBP12.36□□□□□ -0.43
CSNK1D-219ENST00000581660 MED27Q6P2C8 311 aa12.36□□□□□ -0.43
CSNK1D-219ENST00000581660 GPSM1Q86YR5 675 aa12.36□□□□□ -0.43
CSNK1D-219ENST00000581660 SNX31Q8N9S9 440 aa12.36□□□□□ -0.43
CSNK1D-219ENST00000581660 OR7G3Q8NG95 312 aa12.36□□□□□ -0.43
CSNK1D-219ENST00000581660 C10orf105Q8TEF2 133 aa12.36□□□□□ -0.43
CSNK1D-219ENST00000581660 GFM2Q969S9 779 aaKnown RBP12.36□□□□□ -0.43
CSNK1D-219ENST00000581660 SLC35A4Q96G79 324 aa12.36□□□□□ -0.43
CSNK1D-219ENST00000581660 CENPKQ9BS16 269 aa12.36□□□□□ -0.43
CSNK1D-219ENST00000581660 LRRC1Q9BTT6 524 aa12.36□□□□□ -0.43
CSNK1D-219ENST00000581660 STMN4Q9H169 189 aaPredicted RBP12.36□□□□□ -0.43
CSNK1D-219ENST00000581660 CHODLQ9H9P2 273 aa12.36□□□□□ -0.43
CSNK1D-219ENST00000581660 WDR41Q9HAD4 459 aa12.36□□□□□ -0.43
CSNK1D-219ENST00000581660 EHD3Q9NZN3 535 aa12.36□□□□□ -0.43
CSNK1D-219ENST00000581660 NCF1BA6NI72 391 aaPredicted RBP12.35□□□□□ -0.43
CSNK1D-219ENST00000581660 NCF1CA8MVU1 366 aaPredicted RBP12.35□□□□□ -0.43
CSNK1D-219ENST00000581660 SEC14L5O43304 696 aa12.35□□□□□ -0.43
CSNK1D-219ENST00000581660 EEDO75530 441 aaKnown RBP12.35□□□□□ -0.43
CSNK1D-219ENST00000581660 PYGBP11216 843 aa12.35□□□□□ -0.43
CSNK1D-219ENST00000581660 NCF1P14598 390 aaPredicted RBP12.35□□□□□ -0.43
CSNK1D-219ENST00000581660 ITGA2P17301 1181 aa12.35□□□□□ -0.43
CSNK1D-219ENST00000581660 HSPA7P48741 367 aa12.35□□□□□ -0.43
CSNK1D-219ENST00000581660 CLDN20P56880 219 aa12.35□□□□□ -0.43
CSNK1D-219ENST00000581660 LSM11P83369 360 aaKnown RBP eCLIP12.35□□□□□ -0.43
CSNK1D-219ENST00000581660 BSPH1Q075Z2 132 aa12.35□□□□□ -0.43
CSNK1D-219ENST00000581660 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.35□□□□□ -0.43
CSNK1D-219ENST00000581660 SPANXN3Q5MJ09 141 aa12.35□□□□□ -0.43
CSNK1D-219ENST00000581660 TEDDM1Q5T9Z0 273 aa12.35□□□□□ -0.43
CSNK1D-219ENST00000581660 RNASEH2BQ5TBB1 312 aaKnown RBP12.35□□□□□ -0.43
CSNK1D-219ENST00000581660 OR5M10Q6IEU7 315 aa12.35□□□□□ -0.43
CSNK1D-219ENST00000581660 C11orf71Q6IPW1 123 aa12.35□□□□□ -0.43
CSNK1D-219ENST00000581660 ATG4DQ86TL0 474 aaPredicted RBP12.35□□□□□ -0.43
CSNK1D-219ENST00000581660 STK32CQ86UX6 486 aa12.35□□□□□ -0.43
CSNK1D-219ENST00000581660 FADS6Q8N9I5 356 aa12.35□□□□□ -0.43
CSNK1D-219ENST00000581660 ZFAND2BQ8WV99 257 aa12.35□□□□□ -0.43
CSNK1D-219ENST00000581660 ANKRD49Q8WVL7 239 aa12.35□□□□□ -0.43
CSNK1D-219ENST00000581660 FAM168AQ92567 244 aa12.35□□□□□ -0.43
CSNK1D-219ENST00000581660 CERS2Q96G23 380 aa12.35□□□□□ -0.43
CSNK1D-219ENST00000581660 COL21A1Q96P44 957 aa12.35□□□□□ -0.43
CSNK1D-219ENST00000581660 HDHD5Q9BXW7 423 aa12.35□□□□□ -0.43
CSNK1D-219ENST00000581660 DDX31Q9H8H2 851 aaKnown RBP12.35□□□□□ -0.43
CSNK1D-219ENST00000581660 MANSC1Q9H8J5 431 aa12.35□□□□□ -0.43
CSNK1D-219ENST00000581660 PLAC1Q9HBJ0 212 aa12.35□□□□□ -0.43
CSNK1D-219ENST00000581660 CISD1Q9NZ45 108 aaKnown RBP12.35□□□□□ -0.43
CSNK1D-219ENST00000581660 ZNF337Q9Y3M9 751 aa12.35□□□□□ -0.43
CSNK1D-219ENST00000581660 A0A0G2JK05 382 aa12.34□□□□□ -0.43
CSNK1D-219ENST00000581660 LOC100289279A0A1B0GTE1 492 aa12.34□□□□□ -0.43
CSNK1D-219ENST00000581660 SERINC4A6NH21 518 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms