RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 ZNF529Q6P280 563 aa13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 RNF111Q6ZNA4 994 aa13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 Q6ZVL8 140 aa13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 ERN2Q76MJ5 926 aaKnown RBP13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 PIWIL3Q7Z3Z3 882 aaKnown RBP13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 ISCA2Q86U28 154 aa13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 ZNF611Q8N823 705 aa13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 CCDC71LQ8N9Z2 235 aa13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 OR9Q2Q8NGE9 314 aa13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 PXYLP1Q8TE99 480 aa13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 THAP7Q9BT49 309 aaPredicted RBP13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 MRI1Q9BV20 369 aa13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 PPA2Q9H2U2 334 aa13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 ZNF860A6NHJ4 632 aa13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 SCO2O43819 266 aa13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 SLC22A5O76082 557 aa13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 ATG12O94817 140 aa13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 PPP1R3DO95685 299 aa13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 GMPRP36959 345 aa13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 TRIM46Q7Z4K8 759 aa13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 STK35Q8TDR2 534 aa13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 PPP4R1LQ9P1A2 415 aa13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 BTNL2Q9UIR0 455 aa13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 YARS2Q9Y2Z4 477 aaKnown RBP13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 A0A1B0GV50 99 aa13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 AKAIN1P0CW23 69 aa13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 HLA-EP13747 358 aa13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 DCTP40126 519 aa13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 AQP2P41181 271 aa13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 DPY19L2P1Q6NXN4 242 aa13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 POC1BQ8TC44 478 aa13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 TMEM68Q96MH6 324 aa13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 OR2M4Q96R27 311 aa13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 NAA11Q9BSU3 229 aaPredicted RBP13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 SMG9Q9H0W8 520 aaKnown RBP13.82□□□□□ -0.2
CSNK1D-217ENST00000581241 KLK3P07288 261 aaPredicted RBP13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 CDK4P11802 303 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 ALDH3B1P43353 468 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 MC2RQ01718 297 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 DYRK1AQ13627 763 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 RSU1Q15404 277 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 CPZQ66K79 652 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 OR2T35Q8NGX2 323 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 APIPQ96GX9 242 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 ACTRT3Q9BYD9 372 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 PELI2Q9HAT8 420 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 RPS10P5Q9NQ39 176 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 CHD2O14647 1828 aaKnown RBP13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 AKAP12Q02952 1782 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 TYRP1P17643 537 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 FBLP22087 321 aaKnown RBP13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 GPM6BQ13491 265 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 PAGE3Q5JUK9 113 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 GPRIN1Q7Z2K8 1008 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 OR2T4Q8NH00 348 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 OR14A2Q96R54 314 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 NRMQ8IXM6 262 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 RAB7BQ96AH8 199 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 OR51E2Q9H255 320 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 GSTO2Q9H4Y5 243 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 SYNPO2LQ9H987 977 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 HHATLQ9HCP6 504 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 TRAV18A0A075B6X5 111 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 HOXB9P17482 250 aaPredicted RBP13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 TNFRSF1BP20333 461 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 KCNJ5P48544 419 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 RPS21P63220 83 aaKnown RBP13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 SPRED3Q2MJR0 410 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 B3GNT8Q7Z7M8 397 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 DTWD1Q8N5C7 304 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 OR4K13Q8NH42 304 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 SPRYD4Q8WW59 207 aaPredicted RBP13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 SHISA4Q96DD7 197 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 LRIG1Q96JA1 1093 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 SAMD8Q96LT4 415 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 SORT1Q99523 831 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 SYT3Q9BQG1 590 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 MTHFD2LQ9H903 347 aaPredicted RBP13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 KCNK13Q9HB14 408 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 ZNF334Q9HCZ1 680 aaPredicted RBP13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 HRASLS2Q9NWW9 162 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 FGF4P08620 206 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 GPX3P22352 226 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 SLC2A5P22732 501 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 ZXDBP98169 803 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 MAP4K2Q12851 820 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 LRP8Q14114 963 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 CATSPEREQ5SY80 951 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 GALNT10Q86SR1 603 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 GLYATL2Q8WU03 294 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 SLC29A1Q99808 456 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 ZNF442Q9H7R0 627 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 DCAF13Q9NV06 445 aaKnown RBP13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 FAM86C1Q9NVL1 165 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 GJD2Q9UKL4 321 aa13.81□□□□□ -0.2
CSNK1D-217ENST00000581241 HOXB2P14652 356 aa13.8□□□□□ -0.2
CSNK1D-217ENST00000581241 BCL2A1Q16548 175 aa13.8□□□□□ -0.2
CSNK1D-217ENST00000581241 INAVAQ3KP66 663 aa13.8□□□□□ -0.2
CSNK1D-217ENST00000581241 CGB2Q6NT52 195 aa13.8□□□□□ -0.2
CSNK1D-217ENST00000581241 B3GNT7Q8NFL0 401 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms