RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 NR4A3Q92570 626 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 KAT2AQ92830 837 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 HSPBAP1Q96EW2 488 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 RSRC1Q96IZ7 334 aaKnown RBP9.13□□□□□ -0.95
GGA3-209ENST00000580646 LCORQ96JN0 433 aaPredicted RBP9.13□□□□□ -0.95
GGA3-209ENST00000580646 C5orf34Q96MH7 638 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 VSTM2LQ96N03 204 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 RILPQ96NA2 401 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 MS4A4EQ96PG1 132 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 RASL10BQ96S79 203 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 UTP23Q9BRU9 249 aaKnown RBP9.13□□□□□ -0.95
GGA3-209ENST00000580646 SIRT3Q9NTG7 399 aaPredicted RBP9.13□□□□□ -0.95
GGA3-209ENST00000580646 DDX18Q9NVP1 670 aaKnown RBP9.13□□□□□ -0.95
GGA3-209ENST00000580646 GIN1Q9NXP7 522 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 BCAP29Q9UHQ4 241 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 PCDHGB4Q9UN71 923 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 OSGIN2Q9Y236 505 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 GPR55Q9Y2T6 319 aaPredicted RBP9.13□□□□□ -0.95
GGA3-209ENST00000580646 NOTCH2Q04721 2471 aa9.13□□□□□ -0.95
GGA3-209ENST00000580646 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.12□□□□□ -0.95
GGA3-209ENST00000580646 CAPN14A8MX76 684 aa9.12□□□□□ -0.95
GGA3-209ENST00000580646 SLC22A2O15244 555 aa9.12□□□□□ -0.95
GGA3-209ENST00000580646 SHOX2O60902 331 aaPredicted RBP9.12□□□□□ -0.95
GGA3-209ENST00000580646 OR2J2O76002 312 aa9.12□□□□□ -0.95
GGA3-209ENST00000580646 NADKO95544 446 aaPredicted RBP9.12□□□□□ -0.95
GGA3-209ENST00000580646 C6orf47O95873 294 aa9.12□□□□□ -0.95
GGA3-209ENST00000580646 LDLRP01130 860 aa9.12□□□□□ -0.95
GGA3-209ENST00000580646 CRYABP02511 175 aaKnown RBP9.12□□□□□ -0.95
GGA3-209ENST00000580646 MAP3K8P41279 467 aa9.12□□□□□ -0.95
GGA3-209ENST00000580646 CYB561P49447 251 aa9.12□□□□□ -0.95
GGA3-209ENST00000580646 TMED10P49755 219 aaKnown RBP9.12□□□□□ -0.95
GGA3-209ENST00000580646 ST13P50502 369 aaKnown RBP9.12□□□□□ -0.95
GGA3-209ENST00000580646 CDK9P50750 372 aaKnown RBP9.12□□□□□ -0.95
GGA3-209ENST00000580646 TDGF1P3P51864 188 aa9.12□□□□□ -0.95
GGA3-209ENST00000580646 NRG3P56975 720 aa9.12□□□□□ -0.95
GGA3-209ENST00000580646 HBA1P69905 142 aa9.12□□□□□ -0.95
GGA3-209ENST00000580646 PHC1P78364 1004 aa9.12□□□□□ -0.95
GGA3-209ENST00000580646 OC90Q02509 493 aaPredicted RBP9.12□□□□□ -0.95
GGA3-209ENST00000580646 EXOSC7Q15024 291 aaKnown RBP9.12□□□□□ -0.95
GGA3-209ENST00000580646 OR1C1Q15619 314 aa9.12□□□□□ -0.95
GGA3-209ENST00000580646 EXOSC6Q5RKV6 272 aaKnown RBP9.12□□□□□ -0.95
GGA3-209ENST00000580646 SPINK14Q6IE38 97 aa9.12□□□□□ -0.95
GGA3-209ENST00000580646 PAOXQ6QHF9 649 aa9.12□□□□□ -0.95
GGA3-209ENST00000580646 BLOC1S3Q6QNY0 202 aa9.12□□□□□ -0.95
GGA3-209ENST00000580646 CDRT4Q8N9R6 151 aa9.12□□□□□ -0.95
GGA3-209ENST00000580646 GOLM1Q8NBJ4 401 aa9.12□□□□□ -0.95
GGA3-209ENST00000580646 MDS2Q8NDY4 140 aa9.12□□□□□ -0.95
GGA3-209ENST00000580646 DNAJB8Q8NHS0 232 aa9.12□□□□□ -0.95
GGA3-209ENST00000580646 ASB15Q8WXK1 588 aa9.12□□□□□ -0.95
GGA3-209ENST00000580646 FAM120BQ96EK7 910 aaKnown RBP9.12□□□□□ -0.95
GGA3-209ENST00000580646 DTNBP1Q96EV8 351 aa9.12□□□□□ -0.95
GGA3-209ENST00000580646 GIMAP5Q96F15 307 aa9.12□□□□□ -0.95
GGA3-209ENST00000580646 THOC1Q96FV9 657 aaKnown RBP9.12□□□□□ -0.95
GGA3-209ENST00000580646 MARK4Q96L34 752 aa9.12□□□□□ -0.95
GGA3-209ENST00000580646 SGCZQ96LD1 299 aa9.12□□□□□ -0.95
GGA3-209ENST00000580646 SIGLEC12Q96PQ1 595 aa9.12□□□□□ -0.95
GGA3-209ENST00000580646 OR52E6Q96RD3 313 aa9.12□□□□□ -0.95
GGA3-209ENST00000580646 LMF2Q9BU23 707 aaKnown RBP9.12□□□□□ -0.95
GGA3-209ENST00000580646 RMND5AQ9H871 391 aa9.12□□□□□ -0.95
GGA3-209ENST00000580646 FOLH1BQ9HBA9 442 aa9.12□□□□□ -0.95
GGA3-209ENST00000580646 ANKRD10Q9NXR5 420 aa9.12□□□□□ -0.95
GGA3-209ENST00000580646 PLEKHB1Q9UF11 243 aaPredicted RBP9.12□□□□□ -0.95
GGA3-209ENST00000580646 DTX4Q9Y2E6 619 aa9.12□□□□□ -0.95
GGA3-209ENST00000580646 HIVEP3Q5T1R4 2406 aa9.12□□□□□ -0.95
GGA3-209ENST00000580646 SPTBN1Q01082 2364 aaKnown RBP9.12□□□□□ -0.95
GGA3-209ENST00000580646 WWP2O00308 870 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 CFLARO15519 480 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 LRRTM2O43300 516 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 SNX3O60493 162 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 ERN1O75460 977 aaKnown RBP9.11□□□□□ -0.95
GGA3-209ENST00000580646 KRT16P08779 473 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 FBXO45P0C2W1 286 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 ZCCHC18P0CG32 403 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 CT45A8P0DMV1 189 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 CT45A9P0DMV2 189 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 CD46P15529 392 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 NCF2P19878 526 aaPredicted RBP9.11□□□□□ -0.95
GGA3-209ENST00000580646 DRD4P21917 467 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 UQCRC2P22695 453 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 PTGER1P34995 402 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 CCT3P49368 545 aaKnown RBP9.11□□□□□ -0.95
GGA3-209ENST00000580646 PRIM2P49643 509 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 SEC24CP53992 1094 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 NME5P56597 212 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 KCNK10P57789 538 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 TXNL4AP83876 142 aaKnown RBP9.11□□□□□ -0.95
GGA3-209ENST00000580646 PSG6Q00889 435 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 ZNHIT3Q15649 155 aaPredicted RBP9.11□□□□□ -0.95
GGA3-209ENST00000580646 MAPKAPK3Q16644 382 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 VPS26BQ4G0F5 336 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 CYP27C1Q4G0S4 372 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 C4orf17Q53FE4 359 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 CT45A2Q5DJT8 189 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 TMEM81Q6P7N7 255 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 LYPD8Q6UX82 237 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 GFRALQ6UXV0 394 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 SPATA21Q7Z572 469 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 YTHDF3Q7Z739 585 aaKnown RBP9.11□□□□□ -0.95
GGA3-209ENST00000580646 CPLX4Q7Z7G2 160 aa9.11□□□□□ -0.95
GGA3-209ENST00000580646 FUNDC1Q8IVP5 155 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms