RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 FAM111AQ96PZ2 611 aa16.24■□□□□ 0.19
MKS1-209ENST00000580127 TSPYL1Q9H0U9 437 aa16.24■□□□□ 0.19
MKS1-209ENST00000580127 GRPEL1Q9HAV7 217 aa16.24■□□□□ 0.19
MKS1-209ENST00000580127 ELOVL5Q9NYP7 299 aa16.24■□□□□ 0.19
MKS1-209ENST00000580127 VPS29Q9UBQ0 182 aa16.24■□□□□ 0.19
MKS1-209ENST00000580127 PCTPQ9UKL6 214 aa16.24■□□□□ 0.19
MKS1-209ENST00000580127 UTS2RQ9UKP6 389 aa16.24■□□□□ 0.19
MKS1-209ENST00000580127 LINC01387J3KSC0 135 aa16.23■□□□□ 0.19
MKS1-209ENST00000580127 ALDOAP04075 364 aaKnown RBP16.23■□□□□ 0.19
MKS1-209ENST00000580127 HEXAP06865 529 aa16.23■□□□□ 0.19
MKS1-209ENST00000580127 INHBAP08476 426 aa16.23■□□□□ 0.19
MKS1-209ENST00000580127 DPP4P27487 766 aa16.23■□□□□ 0.19
MKS1-209ENST00000580127 CASQ1P31415 396 aa16.23■□□□□ 0.19
MKS1-209ENST00000580127 PTGDSP41222 190 aa16.23■□□□□ 0.19
MKS1-209ENST00000580127 MC3RP41968 323 aa16.23■□□□□ 0.19
MKS1-209ENST00000580127 EMDP50402 254 aa16.23■□□□□ 0.19
MKS1-209ENST00000580127 LHX2P50458 406 aa16.23■□□□□ 0.19
MKS1-209ENST00000580127 PNLIPRP2P54317 469 aa16.23■□□□□ 0.19
MKS1-209ENST00000580127 PRSS57Q6UWY2 283 aa16.23■□□□□ 0.19
MKS1-209ENST00000580127 LARP4Q71RC2 724 aaKnown RBP eCLIP16.23■□□□□ 0.19
MKS1-209ENST00000580127 MEIOBQ8N635 442 aa16.23■□□□□ 0.19
MKS1-209ENST00000580127 CNEP1R1Q8N9A8 125 aa16.23■□□□□ 0.19
MKS1-209ENST00000580127 OR4F6Q8NGB9 312 aa16.23■□□□□ 0.19
MKS1-209ENST00000580127 OR4K17Q8NGC6 315 aa16.23■□□□□ 0.19
MKS1-209ENST00000580127 NUDT8Q8WV74 236 aa16.23■□□□□ 0.19
MKS1-209ENST00000580127 SLC35A4Q96G79 324 aa16.23■□□□□ 0.19
MKS1-209ENST00000580127 ADOQ96SZ5 270 aa16.23■□□□□ 0.19
MKS1-209ENST00000580127 MRPL57Q9BQC6 102 aaKnown RBP16.23■□□□□ 0.19
MKS1-209ENST00000580127 MED18Q9BUE0 208 aa16.23■□□□□ 0.19
MKS1-209ENST00000580127 EHD3Q9NZN3 535 aa16.23■□□□□ 0.19
MKS1-209ENST00000580127 CLCF1Q9UBD9 225 aa16.23■□□□□ 0.19
MKS1-209ENST00000580127 STOML1Q9UBI4 398 aa16.23■□□□□ 0.19
MKS1-209ENST00000580127 WIF1Q9Y5W5 379 aa16.23■□□□□ 0.19
MKS1-209ENST00000580127 A0A1W2PNV4 684 aa16.22■□□□□ 0.19
MKS1-209ENST00000580127 HMX2A2RU54 273 aa16.22■□□□□ 0.19
MKS1-209ENST00000580127 SLC22A20A6NK97 555 aa16.22■□□□□ 0.19
MKS1-209ENST00000580127 CBX7O95931 251 aa16.22■□□□□ 0.19
MKS1-209ENST00000580127 PDYNP01213 254 aa16.22■□□□□ 0.19
MKS1-209ENST00000580127 KRT6AP02538 564 aa16.22■□□□□ 0.19
MKS1-209ENST00000580127 KRT6BP04259 564 aa16.22■□□□□ 0.19
MKS1-209ENST00000580127 HSD3B1P14060 373 aa16.22■□□□□ 0.19
MKS1-209ENST00000580127 ZNF708P17019 499 aa16.22■□□□□ 0.19
MKS1-209ENST00000580127 HSD3B2P26439 372 aa16.22■□□□□ 0.19
MKS1-209ENST00000580127 MPIP34949 423 aa16.22■□□□□ 0.19
MKS1-209ENST00000580127 CD79BP40259 229 aa16.22■□□□□ 0.19
MKS1-209ENST00000580127 KRT6CP48668 564 aa16.22■□□□□ 0.19
MKS1-209ENST00000580127 CLK3P49761 638 aaKnown RBP16.22■□□□□ 0.19
MKS1-209ENST00000580127 SERPINB9P50453 376 aa16.22■□□□□ 0.19
MKS1-209ENST00000580127 DSCR4P56555 118 aaPredicted RBP16.22■□□□□ 0.19
MKS1-209ENST00000580127 TRAF3Q13114 568 aa16.22■□□□□ 0.19
MKS1-209ENST00000580127 CCDC116Q8IYX3 515 aa16.22■□□□□ 0.19
MKS1-209ENST00000580127 ZNF675Q8TD23 568 aa16.22■□□□□ 0.19
MKS1-209ENST00000580127 ZNF592Q92610 1267 aa16.22■□□□□ 0.19
MKS1-209ENST00000580127 PGM2Q96G03 612 aa16.22■□□□□ 0.19
MKS1-209ENST00000580127 BTBD9Q96Q07 612 aa16.22■□□□□ 0.19
MKS1-209ENST00000580127 SMR3AQ99954 134 aa16.22■□□□□ 0.19
MKS1-209ENST00000580127 TAS2R9Q9NYW1 312 aa16.22■□□□□ 0.19
MKS1-209ENST00000580127 SENP1Q9P0U3 644 aa16.22■□□□□ 0.19
MKS1-209ENST00000580127 OR10H1Q9Y4A9 318 aa16.22■□□□□ 0.19
MKS1-209ENST00000580127 TESMINQ9Y4I5 508 aa16.22■□□□□ 0.19
MKS1-209ENST00000580127 CTIFO43310 598 aaKnown RBP16.21■□□□□ 0.19
MKS1-209ENST00000580127 PCSK2P16519 638 aa16.21■□□□□ 0.19
MKS1-209ENST00000580127 GRK2P25098 689 aa16.21■□□□□ 0.19
MKS1-209ENST00000580127 SOX18P35713 384 aa16.21■□□□□ 0.19
MKS1-209ENST00000580127 KCNJ5P48544 419 aa16.21■□□□□ 0.19
MKS1-209ENST00000580127 HEPACAMQ14CZ8 416 aa16.21■□□□□ 0.19
MKS1-209ENST00000580127 Q5PR19 223 aa16.21■□□□□ 0.19
MKS1-209ENST00000580127 DESI1Q6ICB0 168 aa16.21■□□□□ 0.19
MKS1-209ENST00000580127 ZDHHC24Q6UX98 284 aa16.21■□□□□ 0.19
MKS1-209ENST00000580127 CXorf67Q86X51 503 aaPredicted RBP16.21■□□□□ 0.19
MKS1-209ENST00000580127 C1orf52Q8N6N3 182 aaKnown RBP16.21■□□□□ 0.19
MKS1-209ENST00000580127 CNRIP1Q96F85 164 aaPredicted RBP16.21■□□□□ 0.19
MKS1-209ENST00000580127 ZNF681Q96N22 645 aa16.21■□□□□ 0.19
MKS1-209ENST00000580127 SHCBP1LQ9BZQ2 653 aa16.21■□□□□ 0.19
MKS1-209ENST00000580127 STMN4Q9H169 189 aaPredicted RBP16.21■□□□□ 0.19
MKS1-209ENST00000580127 ACSS3Q9H6R3 686 aa16.21■□□□□ 0.19
MKS1-209ENST00000580127 PTGES2Q9H7Z7 377 aa16.21■□□□□ 0.19
MKS1-209ENST00000580127 ZBTB26Q9HCK0 441 aa16.21■□□□□ 0.19
MKS1-209ENST00000580127 PPP4R1LQ9P1A2 415 aa16.21■□□□□ 0.19
MKS1-209ENST00000580127 UQCRHLA0A096LP55 91 aa16.2■□□□□ 0.18
MKS1-209ENST00000580127 A0A1B0GTL3 188 aa16.2■□□□□ 0.18
MKS1-209ENST00000580127 GNG14A0A1W2PPG7 69 aa16.2■□□□□ 0.18
MKS1-209ENST00000580127 CCDC151A5D8V7 595 aa16.2■□□□□ 0.18
MKS1-209ENST00000580127 C16orf97H3BN30 126 aa16.2■□□□□ 0.18
MKS1-209ENST00000580127 ULK1O75385 1050 aa16.2■□□□□ 0.18
MKS1-209ENST00000580127 CLDN18P56856 261 aa16.2■□□□□ 0.18
MKS1-209ENST00000580127 MRPS35P82673 323 aaKnown RBP16.2■□□□□ 0.18
MKS1-209ENST00000580127 FAM27E3Q08E93 113 aa16.2■□□□□ 0.18
MKS1-209ENST00000580127 GALNT1Q10472 559 aaPredicted RBP16.2■□□□□ 0.18
MKS1-209ENST00000580127 ACKR1Q16570 336 aa16.2■□□□□ 0.18
MKS1-209ENST00000580127 OR5M10Q6IEU7 315 aa16.2■□□□□ 0.18
MKS1-209ENST00000580127 C20orf204Q6ZNR8 217 aa16.2■□□□□ 0.18
MKS1-209ENST00000580127 PLD6Q8N2A8 252 aaKnown RBP16.2■□□□□ 0.18
MKS1-209ENST00000580127 STARD4Q96DR4 205 aa16.2■□□□□ 0.18
MKS1-209ENST00000580127 WFIKKN1Q96NZ8 548 aa16.2■□□□□ 0.18
MKS1-209ENST00000580127 NSUN5Q96P11 429 aaKnown RBP16.2■□□□□ 0.18
MKS1-209ENST00000580127 MRPL46Q9H2W6 279 aaKnown RBP16.2■□□□□ 0.18
MKS1-209ENST00000580127 FANCFQ9NPI8 374 aa16.2■□□□□ 0.18
MKS1-209ENST00000580127 FARSBQ9NSD9 589 aaKnown RBP16.2■□□□□ 0.18
MKS1-209ENST00000580127 XPR1Q9UBH6 696 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms