RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 RCOR2Q8IZ40 523 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 OFCC1Q8IZS5 231 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 SYCE1Q8N0S2 351 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 CSGALNACT2Q8N6G5 542 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 WDR36Q8NI36 951 aaKnown RBP2.82□□□□□ -1.96
KPNB1-208ENST00000580019 M1APQ8TC57 530 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 PIGTQ969N2 578 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 SGK3Q96BR1 496 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 MSANTD3Q96H12 275 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 IGSF21Q96ID5 467 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 RBM41Q96IZ5 413 aaKnown RBP2.82□□□□□ -1.96
KPNB1-208ENST00000580019 AKR1E2Q96JD6 320 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 C7orf34Q96L11 122 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 PRRC1Q96M27 445 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 TGM7Q96PF1 710 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 TESK2Q96S53 571 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 AGPAT1Q99943 283 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 CENPKQ9BS16 269 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 POLDIP3Q9BY77 421 aaKnown RBP2.82□□□□□ -1.96
KPNB1-208ENST00000580019 ROPN1BQ9BZX4 212 aaPredicted RBP2.82□□□□□ -1.96
KPNB1-208ENST00000580019 MTIF3Q9H2K0 278 aaKnown RBP2.82□□□□□ -1.96
KPNB1-208ENST00000580019 RGCCQ9H4X1 137 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 DHX33Q9H6R0 707 aaKnown RBP2.82□□□□□ -1.96
KPNB1-208ENST00000580019 KAT8Q9H7Z6 458 aaKnown RBP2.82□□□□□ -1.96
KPNB1-208ENST00000580019 CHST11Q9NPF2 352 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 ZNF701Q9NV72 531 aaPredicted RBP2.82□□□□□ -1.96
KPNB1-208ENST00000580019 UBAP1Q9NZ09 502 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 IL36AQ9UHA7 158 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 PACSIN2Q9UNF0 486 aaPredicted RBP2.82□□□□□ -1.96
KPNB1-208ENST00000580019 RNF6Q9Y252 685 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 RAI2Q9Y5P3 530 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 KLF2Q9Y5W3 355 aaPredicted RBP2.82□□□□□ -1.96
KPNB1-208ENST00000580019 COLEC10Q9Y6Z7 277 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 HFM1A2PYH4 1435 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 SSH2Q76I76 1423 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 KIF1AQ12756 1690 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 A0A0J9YYE9 177 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 SMCO3A2RU48 225 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 MTMR11A4FU01 709 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 SNTNA6NMZ2 147 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 TMEM178BH3BS89 294 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 TIMM23O14925 209 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 LSM1O15116 133 aaKnown RBP2.81□□□□□ -1.96
KPNB1-208ENST00000580019 MDM4O15151 490 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 LDB2O43679 373 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 CAVIN2O95810 425 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 EML2O95834 649 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 GNA14O95837 355 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 TSPAN12O95859 305 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 TRBC1P01850 177 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 CRYABP02511 175 aaKnown RBP2.81□□□□□ -1.96
KPNB1-208ENST00000580019 APOA1P02647 267 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 GSTA1P08263 222 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 PLEKP08567 350 aaPredicted RBP2.81□□□□□ -1.96
KPNB1-208ENST00000580019 SLC35G4P0C7Q5 338 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 GSTT2P0CG29 244 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 GSTT2BP0CG30 244 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 HSMCR30P0CW71 290 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 CTSAP10619 480 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 MCF2P10911 925 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 ACP2P11117 423 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 CHRNB1P11230 501 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 NEFHP12036 1026 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 CD59P13987 128 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 CPN1P15169 458 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 NAGAP17050 411 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 TSPAN8P19075 237 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 POLR2CP19387 275 aaPredicted RBP2.81□□□□□ -1.96
KPNB1-208ENST00000580019 TPSB2P20231 275 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 NT5EP21589 574 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 UCP1P25874 307 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 GJB2P29033 226 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 CSTF2P33240 577 aaKnown RBP eCLIP2.81□□□□□ -1.96
KPNB1-208ENST00000580019 DUTP33316 252 aaKnown RBP2.81□□□□□ -1.96
KPNB1-208ENST00000580019 CYLC1P35663 651 aaPredicted RBP2.81□□□□□ -1.96
KPNB1-208ENST00000580019 MAGEA8P43361 318 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 LEPRP48357 1165 aaKnown RBP2.81□□□□□ -1.96
KPNB1-208ENST00000580019 CCT3P49368 545 aaKnown RBP2.81□□□□□ -1.96
KPNB1-208ENST00000580019 RASSF2P50749 326 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 RAB9AP51151 201 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 LIMK2P53671 638 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 CRYBB1P53674 252 aaPredicted RBP2.81□□□□□ -1.96
KPNB1-208ENST00000580019 MLLT10P55197 1068 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 SLC8A3P57103 927 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 SEC61A1P61619 476 aaKnown RBP2.81□□□□□ -1.96
KPNB1-208ENST00000580019 SP3Q02447 781 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 ITGA9Q13797 1035 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 CTTNQ14247 550 aaKnown RBP2.81□□□□□ -1.96
KPNB1-208ENST00000580019 ELAVL3Q14576 367 aaKnown RBP2.81□□□□□ -1.96
KPNB1-208ENST00000580019 ZNF268Q14587 947 aaPredicted RBP2.81□□□□□ -1.96
KPNB1-208ENST00000580019 GANABQ14697 944 aaKnown RBP2.81□□□□□ -1.96
KPNB1-208ENST00000580019 TPSAB1Q15661 275 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 CHRNA6Q15825 494 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 CAMK4Q16566 473 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 TMEM44Q2T9K0 475 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 ZNF528Q3MIS6 628 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 ACSF3Q4G176 576 aaPredicted RBP2.81□□□□□ -1.96
KPNB1-208ENST00000580019 PHLDA2Q53GA4 152 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 XKR7Q5GH72 579 aa2.81□□□□□ -1.96
KPNB1-208ENST00000580019 LYPLAL1Q5VWZ2 237 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms