RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 MGAT2Q10469 447 aa12.96□□□□□ -0.33
CSNK1D-209ENST00000578904 ZNF155Q12901 538 aaPredicted RBP12.96□□□□□ -0.33
CSNK1D-209ENST00000578904 HLA-DQA1Q5Y7H0 255 aa12.96□□□□□ -0.33
CSNK1D-209ENST00000578904 RNF111Q6ZNA4 994 aa12.96□□□□□ -0.33
CSNK1D-209ENST00000578904 LAPTM4BQ86VI4 370 aa12.96□□□□□ -0.33
CSNK1D-209ENST00000578904 HORMAD2Q8N7B1 307 aa12.96□□□□□ -0.33
CSNK1D-209ENST00000578904 OR52R1Q8NGF1 315 aa12.96□□□□□ -0.33
CSNK1D-209ENST00000578904 SLC9A6Q92581 669 aa12.96□□□□□ -0.33
CSNK1D-209ENST00000578904 TSLPQ969D9 159 aa12.96□□□□□ -0.33
CSNK1D-209ENST00000578904 NACC2Q96BF6 587 aa12.96□□□□□ -0.33
CSNK1D-209ENST00000578904 OR7D2Q96RA2 312 aa12.96□□□□□ -0.33
CSNK1D-209ENST00000578904 OR10A5Q9H207 317 aa12.96□□□□□ -0.33
CSNK1D-209ENST00000578904 PIGUQ9H490 435 aa12.96□□□□□ -0.33
CSNK1D-209ENST00000578904 MRTO4Q9UKD2 239 aaKnown RBP12.96□□□□□ -0.33
CSNK1D-209ENST00000578904 ERVK-19Q9WJR5 959 aa12.96□□□□□ -0.33
CSNK1D-209ENST00000578904 ACACAQ13085 2346 aa12.96□□□□□ -0.34
CSNK1D-209ENST00000578904 CHD8Q9HCK8 2581 aa12.96□□□□□ -0.34
CSNK1D-209ENST00000578904 FRYQ5TBA9 3013 aa12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 OR2W5A6NFC9 320 aa12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 ZNF891A8MT65 544 aaPredicted RBP12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 TGFBR3LH3BV60 316 aa12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 HMGN4O00479 90 aa12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 SORBS2O94875 1100 aaKnown RBP12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 CT62P0C5K7 136 aa12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 KDELR2P33947 212 aa12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 CLCN2P51788 898 aa12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 IL10RAQ13651 578 aa12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 FAM98BQ52LJ0 330 aaKnown RBP12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 GPAT3Q53EU6 434 aa12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 SFT2D3Q587I9 215 aa12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 FAAH2Q6GMR7 532 aa12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 CYP2R1Q6VVX0 501 aa12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 CCDC80Q76M96 950 aa12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 SLC29A4Q7RTT9 530 aa12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 CPEB2Q7Z5Q1 589 aaKnown RBP12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 ANKRD37Q7Z713 158 aa12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 PTOV1Q86YD1 416 aa12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 RAB43Q86YS6 212 aa12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 SPPL2CQ8IUH8 684 aa12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 COX18Q8N8Q8 333 aa12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 NFKBIDQ8NI38 313 aa12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 BBS10Q8TAM1 723 aa12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 PTPMT1Q8WUK0 201 aaPredicted RBP12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 PMM1Q92871 262 aa12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 GIMAP5Q96F15 307 aa12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 SENP5Q96HI0 755 aaPredicted RBP12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 TRNT1Q96Q11 434 aaKnown RBP12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 BTBD2Q9BX70 525 aa12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 OR8D2Q9GZM6 311 aa12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 Q9N2J8 555 aa12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 RYDENQ9NUL5 291 aaKnown RBP12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 CLDN16Q9Y5I7 305 aa12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 HEMK1Q9Y5R4 338 aaPredicted RBP12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 ATRXP46100 2492 aa12.95□□□□□ -0.34
CSNK1D-209ENST00000578904 A0A0G2JPF8 293 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 TCRBV3S1A0A5B6 114 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 DHRS12A0PJE2 317 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 SAGE2PA6NJ88 616 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 A8MUA0 341 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 HNRNPCL2B2RXH8 293 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 HNRNPCL3B7ZW38 293 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 TAF4O00268 1085 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 ENTPD5O75356 428 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 PSMG1O95456 288 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 CBX7O95931 251 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 BCHEP06276 602 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 C8BP07358 591 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 TFPTP0C1Z6 253 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 HNRNPCL4P0DMR1 293 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 PRKAR1AP10644 381 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 NCK1P16333 377 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 WT1P19544 449 aaPredicted RBP12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 MMP11P24347 488 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 PTGER1P34995 402 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 SOX11P35716 441 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 EFNA3P52797 238 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 PSMD4P55036 377 aaKnown RBP12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 CASP9P55211 416 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 RPS26P62854 115 aaKnown RBP12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 TLE3Q04726 772 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 CHRNB3Q05901 458 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 CCNIQ14094 377 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 SSPNQ14714 243 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 MYBPC3Q14896 1274 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 EXOSC7Q15024 291 aaKnown RBP12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 ADRM1Q16186 407 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 LRRC23Q53EV4 343 aaPredicted RBP12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 IRAK1BP1Q5VVH5 260 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 TMEM205Q6UW68 189 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 CCDC81Q6ZN84 652 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 SLC44A2Q8IWA5 706 aaPredicted RBP12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 KDF1Q8NAX2 398 aaPredicted RBP12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 ZSCAN1Q8NBB4 408 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 OR1N1Q8NGS0 311 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 SLC2A12Q8TD20 617 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 GPR151Q8TDV0 419 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 SLC38A5Q8WUX1 472 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 RAB8BQ92930 207 aa12.94□□□□□ -0.34
CSNK1D-209ENST00000578904 YIPF4Q9BSR8 244 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms