RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 DCAF10Q5QP82 559 aa9.49□□□□□ -0.89
SS18-210ENST00000578700 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.49□□□□□ -0.89
SS18-210ENST00000578700 OGFRL1Q5TC84 451 aaPredicted RBP9.49□□□□□ -0.89
SS18-210ENST00000578700 MRM1Q6IN84 353 aaKnown RBP9.49□□□□□ -0.89
SS18-210ENST00000578700 SZRD1Q7Z422 152 aa9.49□□□□□ -0.89
SS18-210ENST00000578700 FJX1Q86VR8 437 aa9.49□□□□□ -0.89
SS18-210ENST00000578700 GPR135Q8IZ08 494 aa9.49□□□□□ -0.89
SS18-210ENST00000578700 ADGRG5Q8IZF4 528 aa9.49□□□□□ -0.89
SS18-210ENST00000578700 OR4N4Q8N0Y3 316 aa9.49□□□□□ -0.89
SS18-210ENST00000578700 TTC29Q8NA56 475 aaPredicted RBP9.49□□□□□ -0.89
SS18-210ENST00000578700 ST6GALNAC3Q8NDV1 305 aa9.49□□□□□ -0.89
SS18-210ENST00000578700 OR56A1Q8NGH5 318 aa9.49□□□□□ -0.89
SS18-210ENST00000578700 FBXO30Q8TB52 745 aa9.49□□□□□ -0.89
SS18-210ENST00000578700 ADAMTS18Q8TE60 1221 aa9.49□□□□□ -0.89
SS18-210ENST00000578700 NRG4Q8WWG1 115 aa9.49□□□□□ -0.89
SS18-210ENST00000578700 LRTOMTQ8WZ04 291 aa9.49□□□□□ -0.89
SS18-210ENST00000578700 SDCCAG3Q96C92 435 aa9.49□□□□□ -0.89
SS18-210ENST00000578700 SLC47A1Q96FL8 570 aa9.49□□□□□ -0.89
SS18-210ENST00000578700 DPH2Q9BQC3 489 aaPredicted RBP9.49□□□□□ -0.89
SS18-210ENST00000578700 NPLQ9BXD5 320 aaPredicted RBP9.49□□□□□ -0.89
SS18-210ENST00000578700 MAGIXQ9H6Y5 334 aa9.49□□□□□ -0.89
SS18-210ENST00000578700 C3orf14Q9HBI5 128 aa9.49□□□□□ -0.89
SS18-210ENST00000578700 DCAF13Q9NV06 445 aaKnown RBP9.49□□□□□ -0.89
SS18-210ENST00000578700 OLAHQ9NV23 265 aa9.49□□□□□ -0.89
SS18-210ENST00000578700 P4HTMQ9NXG6 502 aa9.49□□□□□ -0.89
SS18-210ENST00000578700 IFT80Q9P2H3 777 aaPredicted RBP9.49□□□□□ -0.89
SS18-210ENST00000578700 NDOR1Q9UHB4 597 aa9.49□□□□□ -0.89
SS18-210ENST00000578700 RIMS3Q9UJD0 308 aa9.49□□□□□ -0.89
SS18-210ENST00000578700 ANGPT4Q9Y264 503 aa9.49□□□□□ -0.89
SS18-210ENST00000578700 MRPS33Q9Y291 106 aaKnown RBP9.49□□□□□ -0.89
SS18-210ENST00000578700 ATG4BQ9Y4P1 393 aa9.49□□□□□ -0.89
SS18-210ENST00000578700 LRRC42Q9Y546 428 aa9.49□□□□□ -0.89
SS18-210ENST00000578700 PCDHGA10Q9Y5H3 936 aa9.49□□□□□ -0.89
SS18-210ENST00000578700 CSAG2Q9Y5P2 127 aa9.49□□□□□ -0.89
SS18-210ENST00000578700 CROCCQ5TZA2 2017 aa9.49□□□□□ -0.89
SS18-210ENST00000578700 NUP210LQ5VU65 1888 aa9.49□□□□□ -0.89
SS18-210ENST00000578700 CCDC168Q8NDH2 2452 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 GLOD5A6NK44 160 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 P2RX6O15547 441 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 TPST1O60507 370 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 ALOX12BO75342 701 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 SERPINA1P01009 418 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 HBQ1P09105 142 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 IL1RNP18510 177 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 PEX2P28328 305 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 PPP2R1BP30154 601 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 FRKP42685 505 aaPredicted RBP9.48□□□□□ -0.89
SS18-210ENST00000578700 AVPR1BP47901 424 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 CCT3P49368 545 aaKnown RBP9.48□□□□□ -0.89
SS18-210ENST00000578700 TP53BP2Q13625 1128 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 CRB2Q5IJ48 1285 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 WLSQ5T9L3 541 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 GARNL3Q5VVW2 1013 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 LPCAT4Q643R3 524 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 TMEM214Q6NUQ4 689 aaKnown RBP9.48□□□□□ -0.89
SS18-210ENST00000578700 TMEM64Q6YI46 380 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 Q6ZS92 163 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 ZZZ3Q8IYH5 903 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 MMP21Q8N119 569 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 PAPD5Q8NDF8 572 aaKnown RBP9.48□□□□□ -0.89
SS18-210ENST00000578700 OR4K14Q8NGD5 310 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 OR5AK3PQ8NH89 298 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 SFXN5Q8TD22 340 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 GRHL3Q8TE85 626 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 LZICQ8WZA0 190 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 SLCO4A1Q96BD0 722 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 NEURL3Q96EH8 262 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 CENPNQ96H22 339 aaPredicted RBP9.48□□□□□ -0.89
SS18-210ENST00000578700 PYURFQ96I23 114 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 IP6K3Q96PC2 410 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 MAPKAP1Q9BPZ7 522 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 C9orf16Q9BUW7 83 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 CHID1Q9BWS9 393 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 CHRNA10Q9GZZ6 450 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 SPRTNQ9H040 489 aaPredicted RBP9.48□□□□□ -0.89
SS18-210ENST00000578700 TMEM38AQ9H6F2 299 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 RUBCNLQ9H714 662 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 CXorf36Q9H7Y0 433 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 CLK4Q9HAZ1 481 aaKnown RBP9.48□□□□□ -0.89
SS18-210ENST00000578700 ATP13A2Q9NQ11 1180 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 CNOT11Q9UKZ1 510 aaKnown RBP9.48□□□□□ -0.89
SS18-210ENST00000578700 USP22Q9UPT9 525 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 NAALAD2Q9Y3Q0 740 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 V9GYQ6 96 aa9.48□□□□□ -0.89
SS18-210ENST00000578700 MYO1GB0I1T2 1018 aa9.47□□□□□ -0.89
SS18-210ENST00000578700 H0YJX3 145 aa9.47□□□□□ -0.89
SS18-210ENST00000578700 GALR3O60755 368 aaPredicted RBP9.47□□□□□ -0.89
SS18-210ENST00000578700 KLF7O75840 302 aaPredicted RBP9.47□□□□□ -0.89
SS18-210ENST00000578700 PDE9AO76083 593 aa9.47□□□□□ -0.89
SS18-210ENST00000578700 IGHEP01854 428 aa9.47□□□□□ -0.89
SS18-210ENST00000578700 FHP07954 510 aa9.47□□□□□ -0.89
SS18-210ENST00000578700 SMIM10L1P0DMW3 83 aa9.47□□□□□ -0.89
SS18-210ENST00000578700 BMP2P12643 396 aa9.47□□□□□ -0.89
SS18-210ENST00000578700 ETFAP13804 333 aa9.47□□□□□ -0.89
SS18-210ENST00000578700 ATP6V1C1P21283 382 aa9.47□□□□□ -0.89
SS18-210ENST00000578700 KDELR2P33947 212 aa9.47□□□□□ -0.89
SS18-210ENST00000578700 KHKP50053 298 aa9.47□□□□□ -0.89
SS18-210ENST00000578700 GZMMP51124 257 aa9.47□□□□□ -0.89
SS18-210ENST00000578700 ARHGDIAP52565 204 aa9.47□□□□□ -0.89
SS18-210ENST00000578700 LIM2P55344 173 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms