RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 PAQR7Q86WK9 346 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 KLHDC8AQ8IYD2 350 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 RASGEF1AQ8N9B8 481 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 TREX2Q9BQ50 279 aaPredicted RBP16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 MED20Q9H944 212 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 PLSCR3Q9NRY6 295 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 POT1Q9NUX5 634 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 FBXL12Q9NXK8 326 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 RASD1Q9Y272 281 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 OR14I1A6ND48 311 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 GIFP27352 417 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 MC3RP41968 323 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 PRKCDQ05655 676 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 LRIT3Q3SXY7 679 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 CCDC58Q4VC31 144 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 ADAMTS16Q8TE57 1224 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 ZMYND19Q96E35 227 aaPredicted RBP16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 S100A16Q96FQ6 103 aaKnown RBP16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 GALNT9Q9HCQ5 603 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 CLEC4EQ9ULY5 219 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 ARAP2Q8WZ64 1704 aa16.93■□□□□ 0.3
ATPAF1-214ENST00000576409 ITGA10O75578 1167 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 APODP05090 189 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 GPX2P18283 190 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 AK4P27144 223 aaPredicted RBP16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 MAP3K8P41279 467 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 VSX2P58304 361 aaPredicted RBP16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 OC90Q02509 493 aaPredicted RBP16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 CRYZQ08257 329 aaKnown RBP16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 TP53I3Q53FA7 332 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 MORN1Q5T089 497 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 TMC8Q8IU68 726 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 TRMT10AQ8TBZ6 339 aaKnown RBP16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 KLF16Q9BXK1 252 aaPredicted RBP16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 CUEDC1Q9NWM3 386 aaPredicted RBP16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 MYEF2Q9P2K5 600 aaKnown RBP16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 NOP16Q9Y3C1 178 aaKnown RBP16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 PRKRAO75569 313 aaKnown RBP16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 CD2P06729 351 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 SUOXP51687 545 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 ZMAT1Q5H9K5 638 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 PRAMEF17Q5VTA0 474 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 MSANTD1Q6ZTZ1 278 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 PEG10Q86TG7 708 aaKnown RBP16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 TMPRSS12Q86WS5 348 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 POGLUT1Q8NBL1 392 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 OR10H5Q8NGA6 315 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 OR52E2Q8NGJ4 325 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 MSLNLQ96KJ4 702 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 CLSTN3Q9BQT9 956 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 TMEM45AQ9NWC5 275 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 ANKRD34BA5PLL1 514 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 OR2AT4A6NND4 320 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 GATBO75879 557 aaKnown RBP16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 SPNP16150 400 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 HSD17B12Q53GQ0 312 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 WDR45BQ5MNZ6 344 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 TMPRSS9Q7Z410 1059 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 TTLQ8NG68 377 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 HERVK_113Q902F9 699 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 LGR4Q9BXB1 951 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 RHOP08100 348 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 HOXD8P13378 290 aaPredicted RBP16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 IL1RNP18510 177 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 TAS2R38P59533 333 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 C6orf132Q5T0Z8 1188 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 KCTD9Q7L273 389 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 THAP7Q9BT49 309 aaPredicted RBP16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 SPATA9Q9BWV2 254 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 TRPV4Q9HBA0 871 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 HPF1Q9NWY4 346 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 OR6C2Q9NZP2 312 aa16.92■□□□□ 0.3
ATPAF1-214ENST00000576409 ZFC3H1O60293 1989 aaKnown RBP16.91■□□□□ 0.3
ATPAF1-214ENST00000576409 ANTXRLA6NF34 631 aa16.91■□□□□ 0.3
ATPAF1-214ENST00000576409 CLDN4O14493 209 aa16.91■□□□□ 0.3
ATPAF1-214ENST00000576409 TSPAN12O95859 305 aa16.91■□□□□ 0.3
ATPAF1-214ENST00000576409 IMPA1P29218 277 aa16.91■□□□□ 0.3
ATPAF1-214ENST00000576409 WDR5P61964 334 aaKnown RBP16.91■□□□□ 0.3
ATPAF1-214ENST00000576409 SLC25A24Q6NUK1 477 aa16.91■□□□□ 0.3
ATPAF1-214ENST00000576409 SUN3Q8TAQ9 357 aa16.91■□□□□ 0.3
ATPAF1-214ENST00000576409 A0A1W2PP55 124 aa16.91■□□□□ 0.3
ATPAF1-214ENST00000576409 EIF1AYO14602 144 aaKnown RBP16.91■□□□□ 0.3
ATPAF1-214ENST00000576409 PRODHO43272 600 aa16.91■□□□□ 0.3
ATPAF1-214ENST00000576409 CACNG3O60359 315 aa16.91■□□□□ 0.3
ATPAF1-214ENST00000576409 ENPP2Q13822 863 aa16.91■□□□□ 0.3
ATPAF1-214ENST00000576409 GAS6Q14393 721 aa16.91■□□□□ 0.3
ATPAF1-214ENST00000576409 PDGFRLQ15198 375 aa16.91■□□□□ 0.3
ATPAF1-214ENST00000576409 TMEM69Q5SWH9 247 aa16.91■□□□□ 0.3
ATPAF1-214ENST00000576409 OR4K14Q8NGD5 310 aa16.91■□□□□ 0.3
ATPAF1-214ENST00000576409 TXNL4BQ9NX01 149 aaKnown RBP16.91■□□□□ 0.3
ATPAF1-214ENST00000576409 LYARQ9NX58 379 aaKnown RBP16.91■□□□□ 0.3
ATPAF1-214ENST00000576409 UBQLN2Q9UHD9 624 aa16.91■□□□□ 0.3
ATPAF1-214ENST00000576409 NDRG4Q9ULP0 352 aaKnown RBP16.91■□□□□ 0.3
ATPAF1-214ENST00000576409 GLI3P10071 1580 aa16.91■□□□□ 0.3
ATPAF1-214ENST00000576409 IGLV3-10A0A075B6K4 115 aa16.91■□□□□ 0.3
ATPAF1-214ENST00000576409 C11orf98E9PRG8 122 aa16.91■□□□□ 0.3
ATPAF1-214ENST00000576409 CBARPQ8N350 705 aaPredicted RBP16.91■□□□□ 0.3
ATPAF1-214ENST00000576409 NATD1Q8N6N6 113 aa16.91■□□□□ 0.3
ATPAF1-214ENST00000576409 OR6N2Q8NGY6 317 aa16.91■□□□□ 0.3
ATPAF1-214ENST00000576409 PHOSPHO1Q8TCT1 267 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms