RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 TLE1Q04724 770 aa7.29□□□□□ -1.24
CCDC40-215ENST00000576033 MAP4K2Q12851 820 aa7.29□□□□□ -1.24
CCDC40-215ENST00000576033 ZNF169Q14929 603 aaPredicted RBP7.29□□□□□ -1.24
CCDC40-215ENST00000576033 KPNB1Q14974 876 aaKnown RBP7.29□□□□□ -1.24
CCDC40-215ENST00000576033 TLR1Q15399 786 aa7.29□□□□□ -1.24
CCDC40-215ENST00000576033 INPP5JQ15735 1006 aaPredicted RBP7.29□□□□□ -1.24
CCDC40-215ENST00000576033 FAM174BQ3ZCQ3 159 aa7.29□□□□□ -1.24
CCDC40-215ENST00000576033 GTDC1Q4AE62 458 aa7.29□□□□□ -1.24
CCDC40-215ENST00000576033 ZNF766Q5HY98 468 aa7.29□□□□□ -1.24
CCDC40-215ENST00000576033 RNFT1Q5M7Z0 435 aa7.29□□□□□ -1.24
CCDC40-215ENST00000576033 IGFL3Q6UXB1 125 aa7.29□□□□□ -1.24
CCDC40-215ENST00000576033 GALNTL5Q7Z4T8 443 aa7.29□□□□□ -1.24
CCDC40-215ENST00000576033 CYP4Z2PQ8N1L4 340 aa7.29□□□□□ -1.24
CCDC40-215ENST00000576033 ARMC10Q8N2F6 343 aa7.29□□□□□ -1.24
CCDC40-215ENST00000576033 FBXW8Q8N3Y1 598 aa7.29□□□□□ -1.24
CCDC40-215ENST00000576033 ZADH2Q8N4Q0 377 aa7.29□□□□□ -1.24
CCDC40-215ENST00000576033 DPP10Q8N608 796 aa7.29□□□□□ -1.24
CCDC40-215ENST00000576033 ZNF675Q8TD23 568 aa7.29□□□□□ -1.24
CCDC40-215ENST00000576033 ASB15Q8WXK1 588 aa7.29□□□□□ -1.24
CCDC40-215ENST00000576033 PIK3R3Q92569 461 aa7.29□□□□□ -1.24
CCDC40-215ENST00000576033 VPS33AQ96AX1 596 aa7.29□□□□□ -1.24
CCDC40-215ENST00000576033 SNRNP40Q96DI7 357 aaKnown RBP7.29□□□□□ -1.24
CCDC40-215ENST00000576033 ELP4Q96EB1 424 aa7.29□□□□□ -1.24
CCDC40-215ENST00000576033 GIMAP5Q96F15 307 aa7.29□□□□□ -1.24
CCDC40-215ENST00000576033 METTL2AQ96IZ6 378 aaKnown RBP7.29□□□□□ -1.24
CCDC40-215ENST00000576033 VPS50Q96JG6 964 aa7.29□□□□□ -1.24
CCDC40-215ENST00000576033 VSTM2LQ96N03 204 aa7.29□□□□□ -1.24
CCDC40-215ENST00000576033 UTP23Q9BRU9 249 aaKnown RBP7.29□□□□□ -1.24
CCDC40-215ENST00000576033 PELOQ9BRX2 385 aaKnown RBP7.29□□□□□ -1.24
CCDC40-215ENST00000576033 CLMPQ9H6B4 373 aa7.29□□□□□ -1.24
CCDC40-215ENST00000576033 GIMAP4Q9NUV9 329 aa7.29□□□□□ -1.24
CCDC40-215ENST00000576033 ASF1BQ9NVP2 202 aa7.29□□□□□ -1.24
CCDC40-215ENST00000576033 CCDC167Q9P0B6 97 aa7.29□□□□□ -1.24
CCDC40-215ENST00000576033 LRFN1Q9P244 771 aa7.29□□□□□ -1.24
CCDC40-215ENST00000576033 ABCD2Q9UBJ2 740 aa7.29□□□□□ -1.24
CCDC40-215ENST00000576033 CD300AQ9UGN4 299 aa7.29□□□□□ -1.24
CCDC40-215ENST00000576033 EIF3LQ9Y262 564 aaKnown RBP7.29□□□□□ -1.24
CCDC40-215ENST00000576033 NDUFAF1Q9Y375 327 aa7.29□□□□□ -1.24
CCDC40-215ENST00000576033 HEMK1Q9Y5R4 338 aaPredicted RBP7.29□□□□□ -1.24
CCDC40-215ENST00000576033 COL12A1Q99715 3063 aa7.29□□□□□ -1.24
CCDC40-215ENST00000576033 NBPF19A0A087WUL8 3843 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 C2orf92A0A1B0GVN3 265 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 FAM234BA2RU67 622 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 C2orf72A6NCS6 295 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 EIF4E1BA6NMX2 242 aaKnown RBP7.28□□□□□ -1.24
CCDC40-215ENST00000576033 B8ZZF3 427 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 ACOT8O14734 319 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 MRASO14807 208 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 PRAMEF2O60811 474 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 SCN2BO60939 215 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 SLC25A12O75746 678 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 IGKV1D-16P01601 117 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 GSNP06396 782 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 CT45A8P0DMV1 189 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 CT45A9P0DMV2 189 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 PRPS2P11908 318 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 PLA2G2AP14555 144 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 MST1P26927 711 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 ABCD3P28288 659 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 MAPK1P28482 360 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 GALNSP34059 522 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 GPC1P35052 558 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 PIGAP37287 484 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 ASMTP46597 345 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 RFX3P48380 749 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 HLCSP50747 726 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 C21orf58P58505 322 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 PSME3P61289 254 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 HBA1P69905 142 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 HSF1Q00613 529 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 MAD2L1Q13257 205 aaPredicted RBP7.28□□□□□ -1.24
CCDC40-215ENST00000576033 MRPL49Q13405 166 aaKnown RBP7.28□□□□□ -1.24
CCDC40-215ENST00000576033 CEACAM7Q14002 265 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 CCNIQ14094 377 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 FXNQ16595 210 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 MAPKAPK3Q16644 382 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 SPATS1Q496A3 300 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 TIGD2Q4W5G0 525 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 CT45A2Q5DJT8 189 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 CPTPQ5TA50 214 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 C6orf163Q5TEZ5 329 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 AAGABQ6PD74 315 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 BNC2Q6ZN30 1099 aaPredicted RBP7.28□□□□□ -1.24
CCDC40-215ENST00000576033 SLC29A4Q7RTT9 530 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.28□□□□□ -1.24
CCDC40-215ENST00000576033 HMGN2P46Q86SG4 172 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 ZAR1Q86SH2 424 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 OR2L13Q8N349 312 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 TMEM156Q8N614 296 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 OR5D16Q8NGK9 328 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 NUBPLQ8TB37 319 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 PNPT1Q8TCS8 783 aaKnown RBP7.28□□□□□ -1.24
CCDC40-215ENST00000576033 GRHL3Q8TE85 626 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 JADE3Q92613 823 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 HAS2Q92819 552 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 TMBIM1Q969X1 311 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 PNPLA2Q96AD5 504 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 EFHD2Q96C19 240 aaPredicted RBP7.28□□□□□ -1.24
CCDC40-215ENST00000576033 SPDL1Q96EA4 605 aa7.28□□□□□ -1.24
CCDC40-215ENST00000576033 ARSGQ96EG1 525 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms