RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 URI1O94763 535 aaPredicted RBP5.27□□□□□ -1.57
SMG6-219ENST00000575663 SLC35E2BP0CK96 405 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 SLC35E2P0CK97 266 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 BMP4P12644 408 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 MLNP12872 115 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 APEHP13798 732 aaKnown RBP5.27□□□□□ -1.57
SMG6-219ENST00000575663 CR1P17927 2039 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 GPX3P22352 226 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 CNTFP26441 200 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 ADH6P28332 368 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 KRT20P35900 424 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 PTGDSP41222 190 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 GDF5P43026 501 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 DSCR4P56555 118 aaPredicted RBP5.27□□□□□ -1.57
SMG6-219ENST00000575663 TIAL1Q01085 375 aaKnown RBP eCLIP5.27□□□□□ -1.57
SMG6-219ENST00000575663 HMGCS1Q01581 520 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 BSPH1Q075Z2 132 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 ZNF844Q08AG5 666 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 SLAMF1Q13291 335 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 DOC2AQ14183 400 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 GGTLC2Q14390 218 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 GANABQ14697 944 aaKnown RBP5.27□□□□□ -1.57
SMG6-219ENST00000575663 CR1LQ2VPA4 569 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 HSP90AA5PQ58FG0 334 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 PRR31Q5SQ13 230 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 RBM20Q5T481 1227 aaKnown RBP5.27□□□□□ -1.57
SMG6-219ENST00000575663 DEPDC1Q5TB30 811 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 OR4C11Q6IEV9 310 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 OR52E8Q6IFG1 317 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 ADNP2Q6IQ32 1131 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 FAM45BPQ6NSW5 357 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 GPR180Q86V85 440 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 ANKRD13BQ86YJ7 626 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 TCAIMQ8N3R3 496 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 ZCCHC7Q8N3Z6 543 aaKnown RBP5.27□□□□□ -1.57
SMG6-219ENST00000575663 EIF1ADQ8N9N8 165 aaKnown RBP5.27□□□□□ -1.57
SMG6-219ENST00000575663 WDSUB1Q8N9V3 476 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 C2CD4AQ8NCU7 369 aaPredicted RBP5.27□□□□□ -1.57
SMG6-219ENST00000575663 ADCY4Q8NFM4 1077 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 OR7G1Q8NGA0 311 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 OR4K17Q8NGC6 315 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 FAM45AQ8TCE6 357 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 ACTRT1Q8TDG2 376 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 C10orf105Q8TEF2 133 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.27□□□□□ -1.57
SMG6-219ENST00000575663 HSD17B8Q92506 261 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 NEUROG1Q92886 237 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 HGDQ93099 445 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 ADIPOR1Q96A54 375 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 S100PBPQ96BU1 408 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 CMTM7Q96FZ5 175 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 C1orf159Q96HA4 380 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 LCORQ96JN0 433 aaPredicted RBP5.27□□□□□ -1.57
SMG6-219ENST00000575663 USB1Q9BQ65 265 aaKnown RBP5.27□□□□□ -1.57
SMG6-219ENST00000575663 PIMREGQ9BSJ6 248 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 HDHD5Q9BXW7 423 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 MS4A8Q9BY19 250 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 ITPAQ9BY32 194 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 NXF5Q9H1B4 397 aaKnown RBP5.27□□□□□ -1.57
SMG6-219ENST00000575663 CNOT10Q9H9A5 744 aaKnown RBP5.27□□□□□ -1.57
SMG6-219ENST00000575663 CXorf21Q9HAI6 301 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 XAB2Q9HCS7 855 aaKnown RBP5.27□□□□□ -1.57
SMG6-219ENST00000575663 GLRX2Q9NS18 164 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 LYARQ9NX58 379 aaKnown RBP5.27□□□□□ -1.57
SMG6-219ENST00000575663 PAQR5Q9NXK6 330 aaPredicted RBP5.27□□□□□ -1.57
SMG6-219ENST00000575663 EHD3Q9NZN3 535 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 STOML1Q9UBI4 398 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 FBXL2Q9UKC9 423 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 MCTS1Q9ULC4 181 aaKnown RBP5.27□□□□□ -1.57
SMG6-219ENST00000575663 CORO1CQ9ULV4 474 aaPredicted RBP5.27□□□□□ -1.57
SMG6-219ENST00000575663 OARD1Q9Y530 152 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 NCKAP5O14513 1909 aa5.27□□□□□ -1.57
SMG6-219ENST00000575663 NCF1BA6NI72 391 aaPredicted RBP5.26□□□□□ -1.57
SMG6-219ENST00000575663 NCF1CA8MVU1 366 aaPredicted RBP5.26□□□□□ -1.57
SMG6-219ENST00000575663 FAM157AC9JC47 383 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 H3BML4 177 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 CCDC188H7C350 402 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 NDUFS8O00217 210 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 SAP18O00422 153 aaKnown RBP5.26□□□□□ -1.57
SMG6-219ENST00000575663 DYNC1I1O14576 645 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 UGT2B11O75310 529 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 PRKRAO75569 313 aaKnown RBP5.26□□□□□ -1.57
SMG6-219ENST00000575663 TGFAP01135 160 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 CD8AP01732 235 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 CTAGE8P0CG41 777 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 PCNAP12004 261 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 NCF1P14598 390 aaPredicted RBP5.26□□□□□ -1.57
SMG6-219ENST00000575663 EPB42P16452 691 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 ZNF37AP17032 561 aaPredicted RBP5.26□□□□□ -1.57
SMG6-219ENST00000575663 NAT1P18440 290 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 NT5EP21589 574 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 PCMT1P22061 227 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 GRK2P25098 689 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 PIK3R1P27986 724 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 IL12BP29460 328 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 IRX1P78414 480 aaPredicted RBP5.26□□□□□ -1.57
SMG6-219ENST00000575663 IRF9Q00978 393 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 EFR3AQ14156 821 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 PDCD2Q16342 344 aaPredicted RBP5.26□□□□□ -1.57
SMG6-219ENST00000575663 PDK4Q16654 411 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms