RNA–Protein interactions for RNA: ENST00000575313.1

CLDN7-208, Transcript of claudin 7, humanhuman

TSL 3

Gene CLDN7, Length 605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-208ENST00000575313 VAPAQ9P0L0 249 aa16.53■□□□□ 0.24
CLDN7-208ENST00000575313 BCAP29Q9UHQ4 241 aa16.53■□□□□ 0.24
CLDN7-208ENST00000575313 CNTRLQ7Z7A1 2325 aa16.52■□□□□ 0.24
CLDN7-208ENST00000575313 SMG1Q96Q15 3661 aaKnown RBP16.52■□□□□ 0.24
CLDN7-208ENST00000575313 TRBV5-3A0A0A0MS03 114 aa16.52■□□□□ 0.24
CLDN7-208ENST00000575313 C2orf92A0A1B0GVN3 265 aa16.52■□□□□ 0.24
CLDN7-208ENST00000575313 UPK1AO00322 258 aa16.52■□□□□ 0.24
CLDN7-208ENST00000575313 ATP5HO75947 161 aa16.52■□□□□ 0.24
CLDN7-208ENST00000575313 KRT16P08779 473 aa16.52■□□□□ 0.24
CLDN7-208ENST00000575313 PRKAG1P54619 331 aa16.52■□□□□ 0.24
CLDN7-208ENST00000575313 EXOSC7Q15024 291 aaKnown RBP16.52■□□□□ 0.24
CLDN7-208ENST00000575313 OR1C1Q15619 314 aa16.52■□□□□ 0.24
CLDN7-208ENST00000575313 RUNDC3AQ59EK9 446 aa16.52■□□□□ 0.24
CLDN7-208ENST00000575313 OPN5Q6U736 354 aa16.52■□□□□ 0.24
CLDN7-208ENST00000575313 PRICKLE2Q7Z3G6 844 aa16.52■□□□□ 0.24
CLDN7-208ENST00000575313 SLC15A4Q8N697 577 aa16.52■□□□□ 0.24
CLDN7-208ENST00000575313 MDS2Q8NDY4 140 aa16.52■□□□□ 0.24
CLDN7-208ENST00000575313 SIMC1Q8NDZ2 872 aa16.52■□□□□ 0.24
CLDN7-208ENST00000575313 C17orf47Q8NEP4 570 aa16.52■□□□□ 0.24
CLDN7-208ENST00000575313 NUP43Q8NFH3 380 aa16.52■□□□□ 0.24
CLDN7-208ENST00000575313 SLC22A8Q8TCC7 542 aa16.52■□□□□ 0.24
CLDN7-208ENST00000575313 SFXN5Q8TD22 340 aa16.52■□□□□ 0.24
CLDN7-208ENST00000575313 ASB15Q8WXK1 588 aa16.52■□□□□ 0.24
CLDN7-208ENST00000575313 TP53INP1Q96A56 240 aa16.52■□□□□ 0.24
CLDN7-208ENST00000575313 MOAP1Q96BY2 351 aa16.52■□□□□ 0.24
CLDN7-208ENST00000575313 AURKBQ96GD4 344 aaPredicted RBP16.52■□□□□ 0.24
CLDN7-208ENST00000575313 RASL10BQ96S79 203 aa16.52■□□□□ 0.24
CLDN7-208ENST00000575313 SLC35A5Q9BS91 424 aa16.52■□□□□ 0.24
CLDN7-208ENST00000575313 LIN28AQ9H9Z2 209 aaKnown RBP16.52■□□□□ 0.24
CLDN7-208ENST00000575313 ZCCHC3Q9NUD5 404 aaKnown RBP16.52■□□□□ 0.24
CLDN7-208ENST00000575313 DDX18Q9NVP1 670 aaKnown RBP16.52■□□□□ 0.24
CLDN7-208ENST00000575313 ANKRD10Q9NXR5 420 aa16.52■□□□□ 0.24
CLDN7-208ENST00000575313 NTMQ9P121 344 aa16.52■□□□□ 0.24
CLDN7-208ENST00000575313 LRFN1Q9P244 771 aa16.52■□□□□ 0.24
CLDN7-208ENST00000575313 PRODH2Q9UF12 536 aa16.52■□□□□ 0.24
CLDN7-208ENST00000575313 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.52■□□□□ 0.24
CLDN7-208ENST00000575313 C19orf53Q9UNZ5 99 aaPredicted RBP16.52■□□□□ 0.24
CLDN7-208ENST00000575313 PCDHGB6Q9Y5F9 930 aa16.52■□□□□ 0.24
CLDN7-208ENST00000575313 PCDHGA10Q9Y5H3 936 aa16.52■□□□□ 0.24
CLDN7-208ENST00000575313 NUP214P35658 2090 aaPredicted RBP16.52■□□□□ 0.23
CLDN7-208ENST00000575313 BSNQ9UPA5 3926 aa16.51■□□□□ 0.23
CLDN7-208ENST00000575313 RNF103-CHMP3A0A140T963 221 aa16.51■□□□□ 0.23
CLDN7-208ENST00000575313 TTLL8A6PVC2 850 aa16.51■□□□□ 0.23
CLDN7-208ENST00000575313 FXYD1O00168 92 aa16.51■□□□□ 0.23
CLDN7-208ENST00000575313 UNC5CO95185 931 aa16.51■□□□□ 0.23
CLDN7-208ENST00000575313 CBX7O95931 251 aa16.51■□□□□ 0.23
CLDN7-208ENST00000575313 CD46P15529 392 aa16.51■□□□□ 0.23
CLDN7-208ENST00000575313 CHI3L1P36222 383 aaPredicted RBP16.51■□□□□ 0.23
CLDN7-208ENST00000575313 PRR5P85299 388 aa16.51■□□□□ 0.23
CLDN7-208ENST00000575313 SLC25A3Q00325 362 aa16.51■□□□□ 0.23
CLDN7-208ENST00000575313 INAQ16352 499 aa16.51■□□□□ 0.23
CLDN7-208ENST00000575313 PIGGQ5H8A4 983 aa16.51■□□□□ 0.23
CLDN7-208ENST00000575313 RPUSD3Q6P087 351 aaKnown RBP16.51■□□□□ 0.23
CLDN7-208ENST00000575313 C16orf47Q6ZP98 133 aaPredicted RBP16.51■□□□□ 0.23
CLDN7-208ENST00000575313 SZRD1Q7Z422 152 aa16.51■□□□□ 0.23
CLDN7-208ENST00000575313 C6orf120Q7Z4R8 191 aa16.51■□□□□ 0.23
CLDN7-208ENST00000575313 ZNF605Q86T29 641 aa16.51■□□□□ 0.23
CLDN7-208ENST00000575313 TAGAPQ8N103 731 aa16.51■□□□□ 0.23
CLDN7-208ENST00000575313 OR2L13Q8N349 312 aa16.51■□□□□ 0.23
CLDN7-208ENST00000575313 OR52R1Q8NGF1 315 aa16.51■□□□□ 0.23
CLDN7-208ENST00000575313 OR56A1Q8NGH5 318 aa16.51■□□□□ 0.23
CLDN7-208ENST00000575313 C16orf52Q8NHV5 167 aa16.51■□□□□ 0.23
CLDN7-208ENST00000575313 ZFP90Q8TF47 636 aa16.51■□□□□ 0.23
CLDN7-208ENST00000575313 TMEM125Q96AQ2 219 aa16.51■□□□□ 0.23
CLDN7-208ENST00000575313 C5orf34Q96MH7 638 aa16.51■□□□□ 0.23
CLDN7-208ENST00000575313 ANKRD27Q96NW4 1050 aa16.51■□□□□ 0.23
CLDN7-208ENST00000575313 HOPXQ9BPY8 73 aaPredicted RBP16.51■□□□□ 0.23
CLDN7-208ENST00000575313 SLC39A3Q9BRY0 314 aa16.51■□□□□ 0.23
CLDN7-208ENST00000575313 TPT1P8Q9HAU6 139 aa16.51■□□□□ 0.23
CLDN7-208ENST00000575313 LUZP4Q9P127 313 aa16.51■□□□□ 0.23
CLDN7-208ENST00000575313 CFAP46Q8IYW2 2715 aa16.5■□□□□ 0.23
CLDN7-208ENST00000575313 A8MVJ9 347 aa16.5■□□□□ 0.23
CLDN7-208ENST00000575313 CLIC1O00299 241 aa16.5■□□□□ 0.23
CLDN7-208ENST00000575313 SLC28A2O43868 658 aa16.5■□□□□ 0.23
CLDN7-208ENST00000575313 HNRNPCL1O60812 293 aaKnown RBP16.5■□□□□ 0.23
CLDN7-208ENST00000575313 COQ9O75208 318 aa16.5■□□□□ 0.23
CLDN7-208ENST00000575313 NEURL1O76050 574 aa16.5■□□□□ 0.23
CLDN7-208ENST00000575313 C1QCP02747 245 aa16.5■□□□□ 0.23
CLDN7-208ENST00000575313 CPOXP36551 454 aa16.5■□□□□ 0.23
CLDN7-208ENST00000575313 TP53BP2Q13625 1128 aa16.5■□□□□ 0.23
CLDN7-208ENST00000575313 ZNF766Q5HY98 468 aa16.5■□□□□ 0.23
CLDN7-208ENST00000575313 COLEC12Q5KU26 742 aa16.5■□□□□ 0.23
CLDN7-208ENST00000575313 ZNF468Q5VIY5 522 aaPredicted RBP16.5■□□□□ 0.23
CLDN7-208ENST00000575313 SAXO2Q658L1 398 aa16.5■□□□□ 0.23
CLDN7-208ENST00000575313 SPINK14Q6IE38 97 aa16.5■□□□□ 0.23
CLDN7-208ENST00000575313 NANOGP8Q6NSW7 305 aa16.5■□□□□ 0.23
CLDN7-208ENST00000575313 C8orf82Q6P1X6 216 aaPredicted RBP16.5■□□□□ 0.23
CLDN7-208ENST00000575313 BHLHB9Q6PI77 547 aa16.5■□□□□ 0.23
CLDN7-208ENST00000575313 DND1Q8IYX4 353 aaKnown RBP16.5■□□□□ 0.23
CLDN7-208ENST00000575313 CYP4Z2PQ8N1L4 340 aa16.5■□□□□ 0.23
CLDN7-208ENST00000575313 ZNF441Q8N8Z8 693 aa16.5■□□□□ 0.23
CLDN7-208ENST00000575313 TMEM178AQ8NBL3 297 aa16.5■□□□□ 0.23
CLDN7-208ENST00000575313 RBM15BQ8NDT2 890 aaKnown RBP16.5■□□□□ 0.23
CLDN7-208ENST00000575313 NEURL3Q96EH8 262 aa16.5■□□□□ 0.23
CLDN7-208ENST00000575313 SIGLEC12Q96PQ1 595 aa16.5■□□□□ 0.23
CLDN7-208ENST00000575313 GPATCH1Q9BRR8 931 aaKnown RBP16.5■□□□□ 0.23
CLDN7-208ENST00000575313 NANOGQ9H9S0 305 aa16.5■□□□□ 0.23
CLDN7-208ENST00000575313 HPF1Q9NWY4 346 aa16.5■□□□□ 0.23
CLDN7-208ENST00000575313 NDE1Q9NXR1 346 aa16.5■□□□□ 0.23
CLDN7-208ENST00000575313 TAS2R1Q9NYW7 299 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms