RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 ST13P50502 369 aaKnown RBP9.8□□□□□ -0.84
LITAF-216ENST00000574848 SSR4P51571 173 aa9.8□□□□□ -0.84
LITAF-216ENST00000574848 NEK2P51955 445 aa9.8□□□□□ -0.84
LITAF-216ENST00000574848 C21orf58P58505 322 aa9.8□□□□□ -0.84
LITAF-216ENST00000574848 RPS13P62277 151 aaKnown RBP9.8□□□□□ -0.84
LITAF-216ENST00000574848 STX4Q12846 297 aa9.8□□□□□ -0.84
LITAF-216ENST00000574848 DDX39BQ13838 428 aaKnown RBP9.8□□□□□ -0.84
LITAF-216ENST00000574848 PTGR1Q14914 329 aa9.8□□□□□ -0.84
LITAF-216ENST00000574848 KIAA0040Q15053 153 aa9.8□□□□□ -0.84
LITAF-216ENST00000574848 TAF11Q15544 211 aa9.8□□□□□ -0.84
LITAF-216ENST00000574848 MTX3Q5HYI7 312 aa9.8□□□□□ -0.84
LITAF-216ENST00000574848 C6orf10Q5SRN2 563 aa9.8□□□□□ -0.84
LITAF-216ENST00000574848 MTFR2Q6P444 385 aa9.8□□□□□ -0.84
LITAF-216ENST00000574848 HSDL2Q6YN16 418 aa9.8□□□□□ -0.84
LITAF-216ENST00000574848 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.8□□□□□ -0.84
LITAF-216ENST00000574848 GPR180Q86V85 440 aa9.8□□□□□ -0.84
LITAF-216ENST00000574848 FJX1Q86VR8 437 aa9.8□□□□□ -0.84
LITAF-216ENST00000574848 CHERPQ8IWX8 916 aaKnown RBP9.8□□□□□ -0.84
LITAF-216ENST00000574848 AQP12AQ8IXF9 295 aa9.8□□□□□ -0.84
LITAF-216ENST00000574848 SLC15A3Q8IY34 581 aa9.8□□□□□ -0.84
LITAF-216ENST00000574848 CYP4Z2PQ8N1L4 340 aa9.8□□□□□ -0.84
LITAF-216ENST00000574848 RNF175Q8N4F7 328 aa9.8□□□□□ -0.84
LITAF-216ENST00000574848 RNF148Q8N7C7 305 aa9.8□□□□□ -0.84
LITAF-216ENST00000574848 ZFP62Q8NB50 900 aaPredicted RBP9.8□□□□□ -0.84
LITAF-216ENST00000574848 VPS37AQ8NEZ2 397 aa9.8□□□□□ -0.84
LITAF-216ENST00000574848 C16orf52Q8NHV5 167 aa9.8□□□□□ -0.84
LITAF-216ENST00000574848 SLC2A12Q8TD20 617 aa9.8□□□□□ -0.84
LITAF-216ENST00000574848 DUS3LQ96G46 650 aaKnown RBP9.8□□□□□ -0.84
LITAF-216ENST00000574848 ITCHQ96J02 903 aa9.8□□□□□ -0.84
LITAF-216ENST00000574848 OR52E6Q96RD3 313 aa9.8□□□□□ -0.84
LITAF-216ENST00000574848 MTERF1Q99551 399 aaKnown RBP9.8□□□□□ -0.84
LITAF-216ENST00000574848 CGREF1Q99674 301 aa9.8□□□□□ -0.84
LITAF-216ENST00000574848 SORBS1Q9BX66 1292 aaKnown RBP9.8□□□□□ -0.84
LITAF-216ENST00000574848 LYARQ9NX58 379 aaKnown RBP9.8□□□□□ -0.84
LITAF-216ENST00000574848 SIRT5Q9NXA8 310 aa9.8□□□□□ -0.84
LITAF-216ENST00000574848 ACTR3BQ9P1U1 418 aa9.8□□□□□ -0.84
LITAF-216ENST00000574848 MYOTQ9UBF9 498 aa9.8□□□□□ -0.84
LITAF-216ENST00000574848 MAGEL2Q9UJ55 1249 aa9.8□□□□□ -0.84
LITAF-216ENST00000574848 FBXW2Q9UKT8 454 aa9.8□□□□□ -0.84
LITAF-216ENST00000574848 PCDHA9Q9Y5H5 950 aa9.8□□□□□ -0.84
LITAF-216ENST00000574848 SNX13Q9Y5W8 968 aa9.8□□□□□ -0.84
LITAF-216ENST00000574848 C17orf105B2RV13 164 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 C9JVG2 144 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 SAP18O00422 153 aaKnown RBP9.79□□□□□ -0.84
LITAF-216ENST00000574848 PROM1O43490 865 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 PEX1O43933 1283 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 TMPRSS11DO60235 418 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 IFNA16P05015 189 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 GPIP06744 558 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 UMPSP11172 480 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 PSMA4P25789 261 aaKnown RBP9.79□□□□□ -0.84
LITAF-216ENST00000574848 HTR1EP28566 365 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 SLC7A1P30825 629 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 GALNSP34059 522 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 BUD31P41223 144 aaPredicted RBP9.79□□□□□ -0.84
LITAF-216ENST00000574848 KIR3DL1P43629 444 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 GSTM5P46439 218 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 RNF4P78317 190 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 MRPS22P82650 360 aaKnown RBP9.79□□□□□ -0.84
LITAF-216ENST00000574848 PLIN5Q00G26 463 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 SLAMF1Q13291 335 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 CAPRIN1Q14444 709 aaKnown RBP9.79□□□□□ -0.84
LITAF-216ENST00000574848 PAGE3Q5JUK9 113 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 RNFT1Q5M7Z0 435 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 SWT1Q5T5J6 900 aaKnown RBP9.79□□□□□ -0.84
LITAF-216ENST00000574848 FAM219BQ5XKK7 198 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 LCN8Q6JVE9 175 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 NANOGP8Q6NSW7 305 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 SLC2A7Q6PXP3 512 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 RPTNQ6XPR3 784 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 R3HCC1LQ7Z5L2 792 aaKnown RBP9.79□□□□□ -0.84
LITAF-216ENST00000574848 NUDT13Q86X67 352 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 ST13P4Q8IZP2 240 aaPredicted RBP9.79□□□□□ -0.84
LITAF-216ENST00000574848 SLC34A3Q8N130 599 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 GHDCQ8N2G8 530 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 PQLC1Q8N2U9 271 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 TMEM156Q8N614 296 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 PSD4Q8NDX1 1056 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 NUBPLQ8TB37 319 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 ZNF721Q8TF20 911 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 ITLN2Q8WWU7 325 aaPredicted RBP9.79□□□□□ -0.84
LITAF-216ENST00000574848 TANKQ92844 425 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 APIPQ96GX9 242 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 CCDC120Q96HB5 630 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 FBXL20Q96IG2 436 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 MAGED4Q96JG8 741 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 RASL10BQ96S79 203 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 ZNF184Q99676 751 aaPredicted RBP9.79□□□□□ -0.84
LITAF-216ENST00000574848 PELOQ9BRX2 385 aaKnown RBP9.79□□□□□ -0.84
LITAF-216ENST00000574848 SLC39A3Q9BRY0 314 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 KLHL4Q9C0H6 718 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 RPF2Q9H7B2 306 aaKnown RBP9.79□□□□□ -0.84
LITAF-216ENST00000574848 NANOGQ9H9S0 305 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 PLSCR2Q9NRY7 297 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 ATAD3AQ9NVI7 634 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 FAM120CQ9NX05 1096 aaKnown RBP9.79□□□□□ -0.84
LITAF-216ENST00000574848 CMTM6Q9NX76 183 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.79□□□□□ -0.84
LITAF-216ENST00000574848 PACSIN3Q9UKS6 424 aa9.79□□□□□ -0.84
LITAF-216ENST00000574848 ATG4BQ9Y4P1 393 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms