RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 LRP3O75074 770 aa3.21□□□□□ -1.9
CDC27-216ENST00000574304 NOL4O94818 638 aa3.21□□□□□ -1.9
CDC27-216ENST00000574304 IGSF6O95976 241 aa3.21□□□□□ -1.9
CDC27-216ENST00000574304 ACTL6AO96019 429 aa3.21□□□□□ -1.9
CDC27-216ENST00000574304 MARCKSP29966 332 aaPredicted RBP3.21□□□□□ -1.9
CDC27-216ENST00000574304 ACVR1BP36896 505 aa3.21□□□□□ -1.9
CDC27-216ENST00000574304 CCL11P51671 97 aa3.21□□□□□ -1.9
CDC27-216ENST00000574304 WNT4P56705 351 aa3.21□□□□□ -1.9
CDC27-216ENST00000574304 IL18R1Q13478 541 aa3.21□□□□□ -1.9
CDC27-216ENST00000574304 LGSNQ5TDP6 509 aa3.21□□□□□ -1.9
CDC27-216ENST00000574304 IQCA1Q86XH1 822 aa3.21□□□□□ -1.9
CDC27-216ENST00000574304 MCOLN2Q8IZK6 566 aa3.21□□□□□ -1.9
CDC27-216ENST00000574304 SETD7Q8WTS6 366 aaKnown RBP3.21□□□□□ -1.9
CDC27-216ENST00000574304 TMEM45BQ96B21 275 aa3.21□□□□□ -1.9
CDC27-216ENST00000574304 VMP1Q96GC9 406 aa3.21□□□□□ -1.9
CDC27-216ENST00000574304 C16orf74Q96GX8 76 aa3.21□□□□□ -1.9
CDC27-216ENST00000574304 TECTBQ96PL2 329 aa3.21□□□□□ -1.9
CDC27-216ENST00000574304 TSPAN18Q96SJ8 248 aa3.21□□□□□ -1.9
CDC27-216ENST00000574304 NMUR2Q9GZQ4 415 aa3.21□□□□□ -1.9
CDC27-216ENST00000574304 COMMD8Q9NX08 183 aa3.21□□□□□ -1.9
CDC27-216ENST00000574304 CWC25Q9NXE8 425 aaPredicted RBP3.21□□□□□ -1.9
CDC27-216ENST00000574304 LHX3Q9UBR4 397 aa3.21□□□□□ -1.9
CDC27-216ENST00000574304 BARX2Q9UMQ3 279 aaPredicted RBP3.21□□□□□ -1.9
CDC27-216ENST00000574304 TRBV7-9A0A0J9YWB2 115 aa3.2□□□□□ -1.9
CDC27-216ENST00000574304 NPIPA2E9PIF3 369 aa3.2□□□□□ -1.9
CDC27-216ENST00000574304 BUB1O43683 1085 aa3.2□□□□□ -1.9
CDC27-216ENST00000574304 CCDC166P0CW27 439 aa3.2□□□□□ -1.9
CDC27-216ENST00000574304 PSMB1P20618 241 aaKnown RBP3.2□□□□□ -1.9
CDC27-216ENST00000574304 NOP14P78316 857 aaKnown RBP3.2□□□□□ -1.9
CDC27-216ENST00000574304 PUDPQ08623 228 aa3.2□□□□□ -1.9
CDC27-216ENST00000574304 PPP1R8Q12972 351 aaKnown RBP3.2□□□□□ -1.9
CDC27-216ENST00000574304 EIF4EBP2Q13542 120 aaPredicted RBP3.2□□□□□ -1.9
CDC27-216ENST00000574304 DCAF4L1Q3SXM0 396 aa3.2□□□□□ -1.9
CDC27-216ENST00000574304 MEDAGQ5VYS4 303 aa3.2□□□□□ -1.9
CDC27-216ENST00000574304 ZNF530Q6P9A1 599 aaPredicted RBP3.2□□□□□ -1.9
CDC27-216ENST00000574304 MOB1BQ7L9L4 216 aa3.2□□□□□ -1.9
CDC27-216ENST00000574304 IMMP1LQ96LU5 166 aa3.2□□□□□ -1.9
CDC27-216ENST00000574304 TSSK1BQ9BXA7 367 aa3.2□□□□□ -1.9
CDC27-216ENST00000574304 NDUFA13Q9P0J0 144 aa3.2□□□□□ -1.9
CDC27-216ENST00000574304 FAM153AQ9UHL3 310 aa3.2□□□□□ -1.9
CDC27-216ENST00000574304 DHRS7Q9Y394 339 aa3.2□□□□□ -1.9
CDC27-216ENST00000574304 MACROD2A1Z1Q3 448 aa3.19□□□□□ -1.9
CDC27-216ENST00000574304 FAM231BA6NCW3 169 aa3.19□□□□□ -1.9
CDC27-216ENST00000574304 GOSR1O95249 250 aa3.19□□□□□ -1.9
CDC27-216ENST00000574304 CXCL14O95715 111 aa3.19□□□□□ -1.9
CDC27-216ENST00000574304 SDC1P18827 310 aa3.19□□□□□ -1.9
CDC27-216ENST00000574304 TMOD1P28289 359 aa3.19□□□□□ -1.9
CDC27-216ENST00000574304 OR3A4PP47883 348 aa3.19□□□□□ -1.9
CDC27-216ENST00000574304 DIO3P55073 304 aa3.19□□□□□ -1.9
CDC27-216ENST00000574304 CKAP4Q07065 602 aaKnown RBP3.19□□□□□ -1.9
CDC27-216ENST00000574304 BTG3Q14201 252 aaPredicted RBP3.19□□□□□ -1.9
CDC27-216ENST00000574304 ZNF699Q32M78 642 aa3.19□□□□□ -1.9
CDC27-216ENST00000574304 ZNF528Q3MIS6 628 aa3.19□□□□□ -1.9
CDC27-216ENST00000574304 SBK1Q52WX2 424 aa3.19□□□□□ -1.9
CDC27-216ENST00000574304 SLC25A38Q96DW6 304 aa3.19□□□□□ -1.9
CDC27-216ENST00000574304 ZNF285Q96NJ3 590 aa3.19□□□□□ -1.9
CDC27-216ENST00000574304 TM2D1Q9BX74 207 aa3.19□□□□□ -1.9
CDC27-216ENST00000574304 FAM124BQ9H5Z6 455 aaPredicted RBP3.19□□□□□ -1.9
CDC27-216ENST00000574304 PDE10AQ9Y233 779 aa3.19□□□□□ -1.9
CDC27-216ENST00000574304 IGLV1-47P01700 117 aa3.18□□□□□ -1.9
CDC27-216ENST00000574304 IGHV3-23P01764 117 aa3.18□□□□□ -1.9
CDC27-216ENST00000574304 PRB2P02812 416 aaPredicted RBP3.18□□□□□ -1.9
CDC27-216ENST00000574304 HMOX1P09601 288 aa3.18□□□□□ -1.9
CDC27-216ENST00000574304 RPA1P27694 616 aa3.18□□□□□ -1.9
CDC27-216ENST00000574304 RFC2P35250 354 aa3.18□□□□□ -1.9
CDC27-216ENST00000574304 STK19P49842 368 aaPredicted RBP3.18□□□□□ -1.9
CDC27-216ENST00000574304 SSTP61278 116 aa3.18□□□□□ -1.9
CDC27-216ENST00000574304 RPS8P62241 208 aaKnown RBP3.18□□□□□ -1.9
CDC27-216ENST00000574304 CAMK4Q16566 473 aa3.18□□□□□ -1.9
CDC27-216ENST00000574304 DMKNQ6E0U4 476 aaPredicted RBP3.18□□□□□ -1.9
CDC27-216ENST00000574304 DLEU7Q6UYE1 221 aa3.18□□□□□ -1.9
CDC27-216ENST00000574304 TFAP2EQ6VUC0 442 aa3.18□□□□□ -1.9
CDC27-216ENST00000574304 SCARA5Q6ZMJ2 495 aa3.18□□□□□ -1.9
CDC27-216ENST00000574304 ADGRD2Q7Z7M1 963 aa3.18□□□□□ -1.9
CDC27-216ENST00000574304 YRDCQ86U90 279 aaKnown RBP3.18□□□□□ -1.9
CDC27-216ENST00000574304 AMZ2Q86W34 360 aa3.18□□□□□ -1.9
CDC27-216ENST00000574304 C9orf40Q8IXQ3 194 aa3.18□□□□□ -1.9
CDC27-216ENST00000574304 PEX5LQ8IYB4 626 aa3.18□□□□□ -1.9
CDC27-216ENST00000574304 CENPSQ8N2Z9 138 aa3.18□□□□□ -1.9
CDC27-216ENST00000574304 DTD2Q96FN9 168 aa3.18□□□□□ -1.9
CDC27-216ENST00000574304 ZNF560Q96MR9 790 aa3.18□□□□□ -1.9
CDC27-216ENST00000574304 SDHCQ99643 169 aaPredicted RBP3.18□□□□□ -1.9
CDC27-216ENST00000574304 CBWD1Q9BRT8 395 aa3.18□□□□□ -1.9
CDC27-216ENST00000574304 MEPEQ9NQ76 525 aaPredicted RBP3.18□□□□□ -1.9
CDC27-216ENST00000574304 ELOVL2Q9NXB9 296 aa3.18□□□□□ -1.9
CDC27-216ENST00000574304 MBD2Q9UBB5 411 aa3.18□□□□□ -1.9
CDC27-216ENST00000574304 FKBP7Q9Y680 259 aa3.18□□□□□ -1.9
CDC27-216ENST00000574304 FAM170AA1A519 330 aa3.17□□□□□ -1.9
CDC27-216ENST00000574304 HSF2BPO75031 334 aa3.17□□□□□ -1.9
CDC27-216ENST00000574304 STK17BO94768 372 aa3.17□□□□□ -1.9
CDC27-216ENST00000574304 PGK1P00558 417 aa3.17□□□□□ -1.9
CDC27-216ENST00000574304 GNSP15586 552 aa3.17□□□□□ -1.9
CDC27-216ENST00000574304 PTBP1P26599 531 aaKnown RBP eCLIP3.17□□□□□ -1.9
CDC27-216ENST00000574304 UGT1A3P35503 534 aa3.17□□□□□ -1.9
CDC27-216ENST00000574304 HNRNPFP52597 415 aaKnown RBP3.17□□□□□ -1.9
CDC27-216ENST00000574304 ZNF133P52736 654 aaPredicted RBP3.17□□□□□ -1.9
CDC27-216ENST00000574304 NME3Q13232 169 aa3.17□□□□□ -1.9
CDC27-216ENST00000574304 RAB35Q15286 201 aa3.17□□□□□ -1.9
CDC27-216ENST00000574304 PRR4Q16378 134 aa3.17□□□□□ -1.9
CDC27-216ENST00000574304 KYAT1Q16773 422 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms