RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 FAM174BQ3ZCQ3 159 aa12.28□□□□□ -0.44
CCDC40-205ENST00000571028 SPDYE7PQ495Y7 208 aa12.28□□□□□ -0.44
CCDC40-205ENST00000571028 SPANXN4Q5MJ08 99 aa12.28□□□□□ -0.44
CCDC40-205ENST00000571028 Q6ZPB1 254 aaPredicted RBP12.28□□□□□ -0.44
CCDC40-205ENST00000571028 SLC29A4Q7RTT9 530 aa12.28□□□□□ -0.44
CCDC40-205ENST00000571028 CLECL1Q8IZS7 167 aa12.28□□□□□ -0.44
CCDC40-205ENST00000571028 MIER2Q8N344 545 aa12.28□□□□□ -0.44
CCDC40-205ENST00000571028 OR7G2Q8NG99 324 aa12.28□□□□□ -0.44
CCDC40-205ENST00000571028 OR5L2Q8NGL0 311 aa12.28□□□□□ -0.44
CCDC40-205ENST00000571028 OR9I1Q8NGQ6 314 aa12.28□□□□□ -0.44
CCDC40-205ENST00000571028 PHF10Q8WUB8 498 aaKnown RBP12.28□□□□□ -0.44
CCDC40-205ENST00000571028 ZNF317Q96PQ6 595 aaPredicted RBP12.28□□□□□ -0.44
CCDC40-205ENST00000571028 NPAS2Q99743 824 aa12.28□□□□□ -0.44
CCDC40-205ENST00000571028 ELAC2Q9BQ52 826 aaKnown RBP12.28□□□□□ -0.44
CCDC40-205ENST00000571028 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.28□□□□□ -0.44
CCDC40-205ENST00000571028 NPIPA1Q9UND3 350 aa12.28□□□□□ -0.44
CCDC40-205ENST00000571028 PPIEQ9UNP9 301 aaKnown RBP12.28□□□□□ -0.44
CCDC40-205ENST00000571028 ZNF835Q9Y2P0 537 aa12.28□□□□□ -0.44
CCDC40-205ENST00000571028 CNTRLQ7Z7A1 2325 aa12.28□□□□□ -0.44
CCDC40-205ENST00000571028 C2orf92A0A1B0GVN3 265 aa12.27□□□□□ -0.45
CCDC40-205ENST00000571028 E9PLN8 166 aa12.27□□□□□ -0.45
CCDC40-205ENST00000571028 ANKRD28O15084 1053 aa12.27□□□□□ -0.45
CCDC40-205ENST00000571028 ITGA10O75578 1167 aa12.27□□□□□ -0.45
CCDC40-205ENST00000571028 OR2J2O76002 312 aa12.27□□□□□ -0.45
CCDC40-205ENST00000571028 CBX7O95931 251 aa12.27□□□□□ -0.45
CCDC40-205ENST00000571028 CLPSP04118 112 aa12.27□□□□□ -0.45
CCDC40-205ENST00000571028 IGKV3-11P04433 115 aa12.27□□□□□ -0.45
CCDC40-205ENST00000571028 S1PR1P21453 382 aa12.27□□□□□ -0.45
CCDC40-205ENST00000571028 DNAJA1P31689 397 aaKnown RBP12.27□□□□□ -0.45
CCDC40-205ENST00000571028 LSP1P33241 339 aa12.27□□□□□ -0.45
CCDC40-205ENST00000571028 SOX18P35713 384 aa12.27□□□□□ -0.45
CCDC40-205ENST00000571028 NR0B1P51843 470 aaKnown RBP12.27□□□□□ -0.45
CCDC40-205ENST00000571028 IST1P53990 364 aa12.27□□□□□ -0.45
CCDC40-205ENST00000571028 MLF1P58340 268 aa12.27□□□□□ -0.45
CCDC40-205ENST00000571028 FUT7Q11130 342 aa12.27□□□□□ -0.45
CCDC40-205ENST00000571028 DUSP8Q13202 625 aa12.27□□□□□ -0.45
CCDC40-205ENST00000571028 CEBPEQ15744 281 aa12.27□□□□□ -0.45
CCDC40-205ENST00000571028 PDCD4Q53EL6 469 aaKnown RBP12.27□□□□□ -0.45
CCDC40-205ENST00000571028 TMEM64Q6YI46 380 aa12.27□□□□□ -0.45
CCDC40-205ENST00000571028 C3P1Q6ZMU1 363 aa12.27□□□□□ -0.45
CCDC40-205ENST00000571028 CPLX4Q7Z7G2 160 aa12.27□□□□□ -0.45
CCDC40-205ENST00000571028 FAM98AQ8NCA5 519 aaKnown RBP12.27□□□□□ -0.45
CCDC40-205ENST00000571028 OR4A15Q8NGL6 344 aa12.27□□□□□ -0.45
CCDC40-205ENST00000571028 ZNF675Q8TD23 568 aa12.27□□□□□ -0.45
CCDC40-205ENST00000571028 COQ8BQ96D53 544 aa12.27□□□□□ -0.45
CCDC40-205ENST00000571028 ELP4Q96EB1 424 aa12.27□□□□□ -0.45
CCDC40-205ENST00000571028 VKORC1Q9BQB6 163 aa12.27□□□□□ -0.45
CCDC40-205ENST00000571028 SIKE1Q9BRV8 207 aa12.27□□□□□ -0.45
CCDC40-205ENST00000571028 BHLHE41Q9C0J9 482 aaPredicted RBP12.27□□□□□ -0.45
CCDC40-205ENST00000571028 EQTNQ9NQ60 294 aa12.27□□□□□ -0.45
CCDC40-205ENST00000571028 KLHL1Q9NR64 748 aa12.27□□□□□ -0.45
CCDC40-205ENST00000571028 DDX18Q9NVP1 670 aaKnown RBP12.27□□□□□ -0.45
CCDC40-205ENST00000571028 TNFRSF10DQ9UBN6 386 aa12.27□□□□□ -0.45
CCDC40-205ENST00000571028 MAPRE3Q9UPY8 281 aa12.27□□□□□ -0.45
CCDC40-205ENST00000571028 GMNCA6NCL1 334 aa12.26□□□□□ -0.45
CCDC40-205ENST00000571028 NR5A2O00482 541 aa12.26□□□□□ -0.45
CCDC40-205ENST00000571028 FCHO1O14526 889 aa12.26□□□□□ -0.45
CCDC40-205ENST00000571028 GPX3P22352 226 aa12.26□□□□□ -0.45
CCDC40-205ENST00000571028 POLR2JP52435 117 aaKnown RBP12.26□□□□□ -0.45
CCDC40-205ENST00000571028 PHC1P78364 1004 aa12.26□□□□□ -0.45
CCDC40-205ENST00000571028 ZNF155Q12901 538 aaPredicted RBP12.26□□□□□ -0.45
CCDC40-205ENST00000571028 MYBPHQ13203 477 aa12.26□□□□□ -0.45
CCDC40-205ENST00000571028 EBPQ15125 230 aaKnown RBP12.26□□□□□ -0.45
CCDC40-205ENST00000571028 AGKQ53H12 422 aa12.26□□□□□ -0.45
CCDC40-205ENST00000571028 H3F3CQ6NXT2 135 aa12.26□□□□□ -0.45
CCDC40-205ENST00000571028 WDR53Q7Z5U6 358 aaPredicted RBP12.26□□□□□ -0.45
CCDC40-205ENST00000571028 PRR22Q8IZ63 422 aa12.26□□□□□ -0.45
CCDC40-205ENST00000571028 GHDCQ8N2G8 530 aa12.26□□□□□ -0.45
CCDC40-205ENST00000571028 TMEM156Q8N614 296 aa12.26□□□□□ -0.45
CCDC40-205ENST00000571028 ZNF615Q8N8J6 731 aa12.26□□□□□ -0.45
CCDC40-205ENST00000571028 ACBD4Q8NC06 268 aa12.26□□□□□ -0.45
CCDC40-205ENST00000571028 VPS37AQ8NEZ2 397 aa12.26□□□□□ -0.45
CCDC40-205ENST00000571028 OR7G1Q8NGA0 311 aa12.26□□□□□ -0.45
CCDC40-205ENST00000571028 OR5AK3PQ8NH89 298 aa12.26□□□□□ -0.45
CCDC40-205ENST00000571028 C16orf52Q8NHV5 167 aa12.26□□□□□ -0.45
CCDC40-205ENST00000571028 OR5P2Q8WZ92 322 aa12.26□□□□□ -0.45
CCDC40-205ENST00000571028 TESCQ96BS2 214 aa12.26□□□□□ -0.45
CCDC40-205ENST00000571028 CTHRC1Q96CG8 243 aa12.26□□□□□ -0.45
CCDC40-205ENST00000571028 ZNF764Q96H86 408 aaPredicted RBP12.26□□□□□ -0.45
CCDC40-205ENST00000571028 OR52E6Q96RD3 313 aa12.26□□□□□ -0.45
CCDC40-205ENST00000571028 FOXC2Q99958 501 aa12.26□□□□□ -0.45
CCDC40-205ENST00000571028 TREX2Q9BQ50 279 aaPredicted RBP12.26□□□□□ -0.45
CCDC40-205ENST00000571028 ITPAQ9BY32 194 aa12.26□□□□□ -0.45
CCDC40-205ENST00000571028 WWTR1Q9GZV5 400 aa12.26□□□□□ -0.45
CCDC40-205ENST00000571028 NSRP1Q9H0G5 558 aaKnown RBP12.26□□□□□ -0.45
CCDC40-205ENST00000571028 SDR39U1Q9NRG7 319 aaPredicted RBP12.26□□□□□ -0.45
CCDC40-205ENST00000571028 ACSS1Q9NUB1 689 aaPredicted RBP12.26□□□□□ -0.45
CCDC40-205ENST00000571028 CCDC167Q9P0B6 97 aa12.26□□□□□ -0.45
CCDC40-205ENST00000571028 KLHL14Q9P2G3 628 aa12.26□□□□□ -0.45
CCDC40-205ENST00000571028 MYOTQ9UBF9 498 aa12.26□□□□□ -0.45
CCDC40-205ENST00000571028 ZNF639Q9UID6 485 aa12.26□□□□□ -0.45
CCDC40-205ENST00000571028 PCDHGB4Q9UN71 923 aa12.26□□□□□ -0.45
CCDC40-205ENST00000571028 TRIM33Q9UPN9 1127 aa12.26□□□□□ -0.45
CCDC40-205ENST00000571028 DTX4Q9Y2E6 619 aa12.26□□□□□ -0.45
CCDC40-205ENST00000571028 DNHD1Q96M86 4753 aa12.26□□□□□ -0.45
CCDC40-205ENST00000571028 DOCK10Q96BY6 2186 aa12.25□□□□□ -0.45
CCDC40-205ENST00000571028 OR6C76A6NM76 312 aa12.25□□□□□ -0.45
CCDC40-205ENST00000571028 UPK1AO00322 258 aa12.25□□□□□ -0.45
CCDC40-205ENST00000571028 COQ9O75208 318 aa12.25□□□□□ -0.45
CCDC40-205ENST00000571028 BCAS2O75934 225 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms