RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 APOBEC3BQ9UH17 382 aaKnown RBP8.24□□□□□ -1.09
LINC00558-201ENST00000569422 A4GNTQ9UNA3 340 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 EFCAB10A6NFE3 127 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 METTL15A6NJ78 407 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 C5orf67F2Z3F1 127 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 J3KRW8 73 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 MAN2B1O00754 1011 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 FCMRO60667 390 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 DNAJB6O75190 326 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 ADAP00813 363 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 ERGP11308 486 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 C5AR1P21730 350 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 AZGP1P25311 298 aaKnown RBP8.24□□□□□ -1.09
LINC00558-201ENST00000569422 ATP5A1P25705 553 aaKnown RBP8.24□□□□□ -1.09
LINC00558-201ENST00000569422 RPS21P63220 83 aaKnown RBP8.24□□□□□ -1.09
LINC00558-201ENST00000569422 SIM1P81133 766 aaPredicted RBP8.24□□□□□ -1.09
LINC00558-201ENST00000569422 DEFB134Q4QY38 66 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 ZNF311Q5JNZ3 666 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 NUDT18Q6ZVK8 323 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 MTSS1LQ765P7 747 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 CADM3Q8N126 398 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 TOR1AIP2Q8NFQ8 470 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 ABHD8Q96I13 439 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 LRR1Q96L50 414 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 APOOQ9BUR5 198 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 BTBD1Q9H0C5 482 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 SCPEP1Q9HB40 452 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 TOR4AQ9NXH8 423 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 SLC9A8Q9Y2E8 581 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 GPR55Q9Y2T6 319 aaPredicted RBP8.24□□□□□ -1.09
LINC00558-201ENST00000569422 LRRK1Q38SD2 2015 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 SCN3AQ9NY46 2000 aa8.24□□□□□ -1.09
LINC00558-201ENST00000569422 GSAPA4D1B5 854 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 OR5K4A6NMS3 321 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 CCRL2O00421 344 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 ADAM23O75077 832 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 CLEC3AO75596 197 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 GPX5O75715 221 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 PEBP1P30086 187 aaKnown RBP8.23□□□□□ -1.09
LINC00558-201ENST00000569422 TRIM23P36406 574 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 ACTR1BP42025 376 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 GSTM5P46439 218 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 PPP5CP53041 499 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 ACTR1AP61163 376 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 ERVK-21P61565 698 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 ZNF542PQ5EBM4 170 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 ZNF776Q68DI1 518 aaPredicted RBP8.23□□□□□ -1.09
LINC00558-201ENST00000569422 ABHD17CQ6PCB6 329 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 MAMDC2Q7Z304 686 aaPredicted RBP8.23□□□□□ -1.09
LINC00558-201ENST00000569422 C16orf62Q7Z3J2 963 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 SIX5Q8N196 739 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 TBC1D19Q8N5T2 526 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 ZFP41Q8N8Y5 198 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 NUP43Q8NFH3 380 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 APOBEC4Q8WW27 367 aaKnown RBP8.23□□□□□ -1.09
LINC00558-201ENST00000569422 CMTM3Q96MX0 182 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 MROQ9BYG7 248 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 PLA2G12AQ9BZM1 189 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 FBXO8Q9NRD0 319 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 GDE1Q9NZC3 331 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 MGAT4BQ9UQ53 548 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 B3GNT3Q9Y2A9 372 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 EPOPA6NHQ4 379 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 FAAHO00519 579 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 EPPINO95925 133 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 PKLRP30613 574 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 ZNF91Q05481 1191 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 HYAL2Q12891 473 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 ELOAQ14241 798 aaKnown RBP8.23□□□□□ -1.09
LINC00558-201ENST00000569422 SSX1Q16384 188 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 DUSP6Q16828 381 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 ITPRIPL2Q3MIP1 535 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 CCNJQ5T5M9 372 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 STEAP3Q658P3 488 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 KIAA1161Q6NSJ0 714 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 KIAA1324Q6UXG2 1013 aaKnown RBP8.23□□□□□ -1.09
LINC00558-201ENST00000569422 B3GLCTQ6Y288 498 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 PLEKHG7Q6ZR37 379 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 ZNF761Q86XN6 746 aaPredicted RBP8.23□□□□□ -1.09
LINC00558-201ENST00000569422 SFTPA2Q8IWL1 248 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 SLC30A8Q8IWU4 369 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 PARP16Q8N5Y8 322 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 KBTBD8Q8NFY9 601 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 SUN3Q8TAQ9 357 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 PATE1Q8WXA2 126 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 KLHL6Q8WZ60 621 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 FAM46AQ96IP4 442 aaKnown RBP8.23□□□□□ -1.09
LINC00558-201ENST00000569422 PRDM7Q9NQW5 492 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 SDHAF3Q9NRP4 125 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 ENOPH1Q9UHY7 261 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 KCND3Q9UK17 655 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 AP1M2Q9Y6Q5 423 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 ZNF780BQ9Y6R6 833 aa8.23□□□□□ -1.09
LINC00558-201ENST00000569422 MTCL1Q9Y4B5 1905 aaKnown RBP8.23□□□□□ -1.09
LINC00558-201ENST00000569422 AGAP5A6NIR3 686 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 E9PQ18 207 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 CDK2AP1O14519 115 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 MYL12BO14950 172 aa8.22□□□□□ -1.09
LINC00558-201ENST00000569422 CSO75390 466 aaKnown RBP8.22□□□□□ -1.09
LINC00558-201ENST00000569422 ADH1BP00325 375 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms