RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 Q9N2J8 555 aa14.84□□□□□ -0.03
USB1-215ENST00000569252 SLC52A3Q9NQ40 469 aa14.84□□□□□ -0.03
USB1-215ENST00000569252 SERHLQ9NQF3 203 aa14.84□□□□□ -0.03
USB1-215ENST00000569252 TAGLN3Q9UI15 199 aa14.84□□□□□ -0.03
USB1-215ENST00000569252 PCDHB14Q9Y5E9 798 aa14.84□□□□□ -0.03
USB1-215ENST00000569252 MYO9AB2RTY4 2548 aa14.84□□□□□ -0.03
USB1-215ENST00000569252 TMEM247A6NEH6 219 aa14.83□□□□□ -0.04
USB1-215ENST00000569252 CLIC1O00299 241 aa14.83□□□□□ -0.04
USB1-215ENST00000569252 ACOX3O15254 700 aa14.83□□□□□ -0.04
USB1-215ENST00000569252 ITGA10O75578 1167 aa14.83□□□□□ -0.04
USB1-215ENST00000569252 OR2J2O76002 312 aa14.83□□□□□ -0.04
USB1-215ENST00000569252 CLPSP04118 112 aa14.83□□□□□ -0.04
USB1-215ENST00000569252 SFTPCP11686 197 aa14.83□□□□□ -0.04
USB1-215ENST00000569252 GABRA3P34903 492 aa14.83□□□□□ -0.04
USB1-215ENST00000569252 PSMD4P55036 377 aaKnown RBP14.83□□□□□ -0.04
USB1-215ENST00000569252 MLLT10P55197 1068 aa14.83□□□□□ -0.04
USB1-215ENST00000569252 MLF1P58340 268 aa14.83□□□□□ -0.04
USB1-215ENST00000569252 PIGGQ5H8A4 983 aa14.83□□□□□ -0.04
USB1-215ENST00000569252 ATAD3BQ5T9A4 648 aa14.83□□□□□ -0.04
USB1-215ENST00000569252 FCRLBQ6BAA4 426 aa14.83□□□□□ -0.04
USB1-215ENST00000569252 OPN5Q6U736 354 aa14.83□□□□□ -0.04
USB1-215ENST00000569252 TRPM8Q7Z2W7 1104 aa14.83□□□□□ -0.04
USB1-215ENST00000569252 CLEC4FQ8N1N0 589 aa14.83□□□□□ -0.04
USB1-215ENST00000569252 FITM2Q8N6M3 262 aa14.83□□□□□ -0.04
USB1-215ENST00000569252 HORMAD2Q8N7B1 307 aa14.83□□□□□ -0.04
USB1-215ENST00000569252 C9orf43Q8TAL5 461 aaPredicted RBP14.83□□□□□ -0.04
USB1-215ENST00000569252 NEURL3Q96EH8 262 aa14.83□□□□□ -0.04
USB1-215ENST00000569252 NSL1Q96IY1 281 aa14.83□□□□□ -0.04
USB1-215ENST00000569252 YIPF4Q9BSR8 244 aa14.83□□□□□ -0.04
USB1-215ENST00000569252 THUMPD3Q9BV44 507 aaKnown RBP14.83□□□□□ -0.04
USB1-215ENST00000569252 ITPAQ9BY32 194 aa14.83□□□□□ -0.04
USB1-215ENST00000569252 PAIP1Q9H074 479 aaKnown RBP14.83□□□□□ -0.04
USB1-215ENST00000569252 LIN28AQ9H9Z2 209 aaKnown RBP14.83□□□□□ -0.04
USB1-215ENST00000569252 TPT1P8Q9HAU6 139 aa14.83□□□□□ -0.04
USB1-215ENST00000569252 EXD2Q9NVH0 621 aa14.83□□□□□ -0.04
USB1-215ENST00000569252 ZNF223Q9UK11 482 aaPredicted RBP14.83□□□□□ -0.04
USB1-215ENST00000569252 GPR55Q9Y2T6 319 aaPredicted RBP14.83□□□□□ -0.04
USB1-215ENST00000569252 UNC79Q9P2D8 2635 aa14.82□□□□□ -0.04
USB1-215ENST00000569252 CLEC18AA5D8T8 446 aa14.82□□□□□ -0.04
USB1-215ENST00000569252 FRG2CA6NGY1 282 aa14.82□□□□□ -0.04
USB1-215ENST00000569252 GP1BBP13224 206 aa14.82□□□□□ -0.04
USB1-215ENST00000569252 CRATP43155 626 aa14.82□□□□□ -0.04
USB1-215ENST00000569252 MAGEA8P43361 318 aa14.82□□□□□ -0.04
USB1-215ENST00000569252 UQCRFS1P47985 274 aa14.82□□□□□ -0.04
USB1-215ENST00000569252 TMED10P49755 219 aaKnown RBP14.82□□□□□ -0.04
USB1-215ENST00000569252 KHKP50053 298 aa14.82□□□□□ -0.04
USB1-215ENST00000569252 OC90Q02509 493 aaPredicted RBP14.82□□□□□ -0.04
USB1-215ENST00000569252 DECR1Q16698 335 aa14.82□□□□□ -0.04
USB1-215ENST00000569252 TRMT5Q32P41 509 aaKnown RBP14.82□□□□□ -0.04
USB1-215ENST00000569252 CYP27C1Q4G0S4 372 aa14.82□□□□□ -0.04
USB1-215ENST00000569252 LRIF1Q5T3J3 769 aa14.82□□□□□ -0.04
USB1-215ENST00000569252 B3GNTL1Q67FW5 361 aaPredicted RBP14.82□□□□□ -0.04
USB1-215ENST00000569252 MFSD12Q6NUT3 480 aa14.82□□□□□ -0.04
USB1-215ENST00000569252 CDC73Q6P1J9 531 aa14.82□□□□□ -0.04
USB1-215ENST00000569252 CLEC18BQ6UXF7 455 aa14.82□□□□□ -0.04
USB1-215ENST00000569252 TREML1Q86YW5 311 aa14.82□□□□□ -0.04
USB1-215ENST00000569252 DND1Q8IYX4 353 aaKnown RBP14.82□□□□□ -0.04
USB1-215ENST00000569252 CLEC18CQ8NCF0 446 aa14.82□□□□□ -0.04
USB1-215ENST00000569252 SIMC1Q8NDZ2 872 aa14.82□□□□□ -0.04
USB1-215ENST00000569252 ZFP90Q8TF47 636 aa14.82□□□□□ -0.04
USB1-215ENST00000569252 ADIPOR1Q96A54 375 aa14.82□□□□□ -0.04
USB1-215ENST00000569252 ROPN1LQ96C74 230 aa14.82□□□□□ -0.04
USB1-215ENST00000569252 LRRC58Q96CX6 371 aa14.82□□□□□ -0.04
USB1-215ENST00000569252 RCN3Q96D15 328 aa14.82□□□□□ -0.04
USB1-215ENST00000569252 C16orf58Q96GQ5 468 aa14.82□□□□□ -0.04
USB1-215ENST00000569252 ABHD17AQ96GS6 310 aa14.82□□□□□ -0.04
USB1-215ENST00000569252 VSTM2LQ96N03 204 aa14.82□□□□□ -0.04
USB1-215ENST00000569252 STACQ99469 402 aa14.82□□□□□ -0.04
USB1-215ENST00000569252 HOPXQ9BPY8 73 aaPredicted RBP14.82□□□□□ -0.04
USB1-215ENST00000569252 UTP23Q9BRU9 249 aaKnown RBP14.82□□□□□ -0.04
USB1-215ENST00000569252 LMF2Q9BU23 707 aaKnown RBP14.82□□□□□ -0.04
USB1-215ENST00000569252 ADNPQ9H2P0 1102 aa14.82□□□□□ -0.04
USB1-215ENST00000569252 THUMPD1Q9NXG2 353 aaKnown RBP14.82□□□□□ -0.04
USB1-215ENST00000569252 GIN1Q9NXP7 522 aa14.82□□□□□ -0.04
USB1-215ENST00000569252 ERVK-11Q9UQG0 969 aa14.82□□□□□ -0.04
USB1-215ENST00000569252 ZNF451Q9Y4E5 1061 aa14.82□□□□□ -0.04
USB1-215ENST00000569252 PCDHGB7Q9Y5F8 929 aa14.82□□□□□ -0.04
USB1-215ENST00000569252 PCDHGA9Q9Y5G4 932 aaKnown RBP14.82□□□□□ -0.04
USB1-215ENST00000569252 TNRC6AQ8NDV7 1962 aaKnown RBP14.82□□□□□ -0.04
USB1-215ENST00000569252 ASPDHA6ND91 283 aa14.81□□□□□ -0.04
USB1-215ENST00000569252 A8MVJ9 347 aa14.81□□□□□ -0.04
USB1-215ENST00000569252 FBP2O00757 339 aa14.81□□□□□ -0.04
USB1-215ENST00000569252 PRKNO60260 465 aaPredicted RBP14.81□□□□□ -0.04
USB1-215ENST00000569252 CEACAM4O75871 244 aa14.81□□□□□ -0.04
USB1-215ENST00000569252 RNF224P0DH78 156 aa14.81□□□□□ -0.04
USB1-215ENST00000569252 CD1EP15812 388 aa14.81□□□□□ -0.04
USB1-215ENST00000569252 IL12BP29460 328 aa14.81□□□□□ -0.04
USB1-215ENST00000569252 CYB561P49447 251 aa14.81□□□□□ -0.04
USB1-215ENST00000569252 NUDT2P50583 147 aa14.81□□□□□ -0.04
USB1-215ENST00000569252 RPP38P78345 283 aaKnown RBP14.81□□□□□ -0.04
USB1-215ENST00000569252 ARG2P78540 354 aa14.81□□□□□ -0.04
USB1-215ENST00000569252 MRPS22P82650 360 aaKnown RBP14.81□□□□□ -0.04
USB1-215ENST00000569252 DUSP8Q13202 625 aa14.81□□□□□ -0.04
USB1-215ENST00000569252 MFAP5Q13361 173 aa14.81□□□□□ -0.04
USB1-215ENST00000569252 SAXO2Q658L1 398 aa14.81□□□□□ -0.04
USB1-215ENST00000569252 FAM91A1Q658Y4 838 aa14.81□□□□□ -0.04
USB1-215ENST00000569252 RNF130Q86XS8 419 aa14.81□□□□□ -0.04
USB1-215ENST00000569252 HPS6Q86YV9 775 aa14.81□□□□□ -0.04
USB1-215ENST00000569252 GPALPP1Q8IXQ4 340 aa14.81□□□□□ -0.04
USB1-215ENST00000569252 ZADH2Q8N4Q0 377 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms