RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 PGM2Q96G03 612 aa14.25□□□□□ -0.13
HERPUD1-215ENST00000568676 BTBD9Q96Q07 612 aa14.25□□□□□ -0.13
HERPUD1-215ENST00000568676 MRPL1Q9BYD6 325 aaKnown RBP14.25□□□□□ -0.13
HERPUD1-215ENST00000568676 NOL11Q9H8H0 719 aaKnown RBP14.25□□□□□ -0.13
HERPUD1-215ENST00000568676 UBTD1Q9HAC8 227 aa14.25□□□□□ -0.13
HERPUD1-215ENST00000568676 NMRK1Q9NWW6 199 aa14.25□□□□□ -0.13
HERPUD1-215ENST00000568676 KLHL28Q9NXS3 571 aa14.25□□□□□ -0.13
HERPUD1-215ENST00000568676 GPR55Q9Y2T6 319 aaPredicted RBP14.25□□□□□ -0.13
HERPUD1-215ENST00000568676 JMJD1CQ15652 2540 aa14.24□□□□□ -0.13
HERPUD1-215ENST00000568676 HIVEP2P31629 2446 aa14.24□□□□□ -0.13
HERPUD1-215ENST00000568676 C16orf97H3BN30 126 aa14.24□□□□□ -0.13
HERPUD1-215ENST00000568676 OR7A17O14581 309 aa14.24□□□□□ -0.13
HERPUD1-215ENST00000568676 SMAD7O15105 426 aaKnown RBP14.24□□□□□ -0.13
HERPUD1-215ENST00000568676 SIAH2O43255 324 aa14.24□□□□□ -0.13
HERPUD1-215ENST00000568676 EMC8O43402 210 aa14.24□□□□□ -0.13
HERPUD1-215ENST00000568676 TNFRSF21O75509 655 aa14.24□□□□□ -0.13
HERPUD1-215ENST00000568676 ERAL1O75616 437 aaKnown RBP14.24□□□□□ -0.13
HERPUD1-215ENST00000568676 REM1O75628 298 aa14.24□□□□□ -0.13
HERPUD1-215ENST00000568676 CD8BP10966 210 aa14.24□□□□□ -0.13
HERPUD1-215ENST00000568676 PAX1P15863 534 aa14.24□□□□□ -0.13
HERPUD1-215ENST00000568676 DPP4P27487 766 aa14.24□□□□□ -0.13
HERPUD1-215ENST00000568676 FEN1P39748 380 aaKnown RBP14.24□□□□□ -0.13
HERPUD1-215ENST00000568676 EMDP50402 254 aa14.24□□□□□ -0.13
HERPUD1-215ENST00000568676 DSCR4P56555 118 aaPredicted RBP14.24□□□□□ -0.13
HERPUD1-215ENST00000568676 EXOSC7Q15024 291 aaKnown RBP14.24□□□□□ -0.13
HERPUD1-215ENST00000568676 DESI1Q6ICB0 168 aa14.24□□□□□ -0.13
HERPUD1-215ENST00000568676 COMMD6Q7Z4G1 85 aa14.24□□□□□ -0.13
HERPUD1-215ENST00000568676 CNEP1R1Q8N9A8 125 aa14.24□□□□□ -0.13
HERPUD1-215ENST00000568676 FBF1Q8TES7 1133 aa14.24□□□□□ -0.13
HERPUD1-215ENST00000568676 TMBIM1Q969X1 311 aa14.24□□□□□ -0.13
HERPUD1-215ENST00000568676 KLHL29Q96CT2 875 aa14.24□□□□□ -0.13
HERPUD1-215ENST00000568676 PERPQ96FX8 193 aa14.24□□□□□ -0.13
HERPUD1-215ENST00000568676 NAPGQ99747 312 aaPredicted RBP14.24□□□□□ -0.13
HERPUD1-215ENST00000568676 DPH5Q9H2P9 285 aa14.24□□□□□ -0.13
HERPUD1-215ENST00000568676 ELOVL6Q9H5J4 265 aa14.24□□□□□ -0.13
HERPUD1-215ENST00000568676 BRF2Q9HAW0 419 aa14.24□□□□□ -0.13
HERPUD1-215ENST00000568676 EHD3Q9NZN3 535 aa14.24□□□□□ -0.13
HERPUD1-215ENST00000568676 TRPS1Q9UHF7 1281 aa14.24□□□□□ -0.13
HERPUD1-215ENST00000568676 FBXL2Q9UKC9 423 aa14.24□□□□□ -0.13
HERPUD1-215ENST00000568676 ZNF175Q9Y473 711 aa14.24□□□□□ -0.13
HERPUD1-215ENST00000568676 A0A096LPK6 155 aa14.23□□□□□ -0.13
HERPUD1-215ENST00000568676 LRRC14BA6NHZ5 514 aa14.23□□□□□ -0.13
HERPUD1-215ENST00000568676 STX16-NPEPL1H3BU86 382 aa14.23□□□□□ -0.13
HERPUD1-215ENST00000568676 STX16O14662 325 aa14.23□□□□□ -0.13
HERPUD1-215ENST00000568676 SIX3O95343 332 aaPredicted RBP14.23□□□□□ -0.13
HERPUD1-215ENST00000568676 PPP3CBP16298 524 aa14.23□□□□□ -0.13
HERPUD1-215ENST00000568676 GRK2P25098 689 aa14.23□□□□□ -0.13
HERPUD1-215ENST00000568676 KCNJ5P48544 419 aa14.23□□□□□ -0.13
HERPUD1-215ENST00000568676 PNLIPRP2P54317 469 aa14.23□□□□□ -0.13
HERPUD1-215ENST00000568676 IRF9Q00978 393 aa14.23□□□□□ -0.13
HERPUD1-215ENST00000568676 GANABQ14697 944 aaKnown RBP14.23□□□□□ -0.13
HERPUD1-215ENST00000568676 TRMT12Q53H54 448 aaKnown RBP14.23□□□□□ -0.13
HERPUD1-215ENST00000568676 ZNF474Q6S9Z5 364 aaPredicted RBP14.23□□□□□ -0.13
HERPUD1-215ENST00000568676 PLEKHM3Q6ZWE6 761 aa14.23□□□□□ -0.13
HERPUD1-215ENST00000568676 MILR1Q7Z6M3 343 aa14.23□□□□□ -0.13
HERPUD1-215ENST00000568676 OR52B6Q8NGF0 335 aa14.23□□□□□ -0.13
HERPUD1-215ENST00000568676 PPP1R14CQ8TAE6 165 aa14.23□□□□□ -0.13
HERPUD1-215ENST00000568676 RNF138Q8WVD3 245 aa14.23□□□□□ -0.13
HERPUD1-215ENST00000568676 ZNF845Q96IR2 970 aaPredicted RBP14.23□□□□□ -0.13
HERPUD1-215ENST00000568676 MARK4Q96L34 752 aa14.23□□□□□ -0.13
HERPUD1-215ENST00000568676 CDK15Q96Q40 435 aa14.23□□□□□ -0.13
HERPUD1-215ENST00000568676 CPSF2Q9P2I0 782 aaKnown RBP14.23□□□□□ -0.13
HERPUD1-215ENST00000568676 ARID1AO14497 2285 aa14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 INAFM1C9JVW0 142 aa14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 ZIC3O60481 467 aa14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 TSPAN2O60636 221 aa14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 CNOT4O95628 575 aaKnown RBP14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 ALDOAP04075 364 aaKnown RBP14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 RBP1P09455 135 aa14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 FCGR2AP12318 317 aa14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 IL12BP29460 328 aa14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 TYK2P29597 1187 aa14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 MAGEA4P43358 317 aa14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 KIR2DL2P43627 348 aaPredicted RBP14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 PTH2RP49190 550 aa14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 GNG11P61952 73 aa14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 ERCC6LQ2NKX8 1250 aa14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 MROH9Q5TGP6 573 aa14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 VWA1Q6PCB0 445 aa14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 PLXDC2Q6UX71 529 aa14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 BTLAQ7Z6A9 289 aa14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 MED12LQ86YW9 2145 aa14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 PTGR2Q8N8N7 351 aaPredicted RBP14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 OR4K17Q8NGC6 315 aa14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 TM4SF18Q96CE8 201 aa14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 ZNF681Q96N22 645 aa14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 GPR78Q96P69 363 aa14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 ADOQ96SZ5 270 aa14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 SHCBP1LQ9BZQ2 653 aa14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 CXorf56Q9H5V9 222 aa14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 RNF122Q9H9V4 155 aa14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 FANCFQ9NPI8 374 aa14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 SDHAF3Q9NRP4 125 aa14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 GRHL1Q9NZI5 618 aa14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 SNX6Q9UNH7 406 aa14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 SLC12A4Q9UP95 1085 aa14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 UTP11Q9Y3A2 253 aaKnown RBP14.22□□□□□ -0.13
HERPUD1-215ENST00000568676 TRIM64A6NGJ6 449 aa14.21□□□□□ -0.13
HERPUD1-215ENST00000568676 TRIM64BA6NI03 449 aa14.21□□□□□ -0.13
HERPUD1-215ENST00000568676 CGAP01215 116 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms