RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 UTS2RQ9UKP6 389 aa14.07□□□□□ -0.16
NME3-211ENST00000568561 PACSIN3Q9UKS6 424 aa14.07□□□□□ -0.16
NME3-211ENST00000568561 WIF1Q9Y5W5 379 aa14.07□□□□□ -0.16
NME3-211ENST00000568561 A0A1W2PNV4 684 aa14.06□□□□□ -0.16
NME3-211ENST00000568561 SIAH2O43255 324 aa14.06□□□□□ -0.16
NME3-211ENST00000568561 SMNDC1O75940 238 aaKnown RBP eCLIP14.06□□□□□ -0.16
NME3-211ENST00000568561 GOSR1O95249 250 aa14.06□□□□□ -0.16
NME3-211ENST00000568561 ESRRBO95718 433 aa14.06□□□□□ -0.16
NME3-211ENST00000568561 RBP1P09455 135 aa14.06□□□□□ -0.16
NME3-211ENST00000568561 DRD5P21918 477 aa14.06□□□□□ -0.16
NME3-211ENST00000568561 SRD5A2P31213 254 aa14.06□□□□□ -0.16
NME3-211ENST00000568561 MAGEA12P43365 314 aa14.06□□□□□ -0.16
NME3-211ENST00000568561 ZNF628Q5EBL2 1059 aa14.06□□□□□ -0.16
NME3-211ENST00000568561 Q5PR19 223 aa14.06□□□□□ -0.16
NME3-211ENST00000568561 VWA1Q6PCB0 445 aa14.06□□□□□ -0.16
NME3-211ENST00000568561 NPSR1Q6W5P4 371 aa14.06□□□□□ -0.16
NME3-211ENST00000568561 UBQLNLQ8IYU4 475 aa14.06□□□□□ -0.16
NME3-211ENST00000568561 CCDC116Q8IYX3 515 aa14.06□□□□□ -0.16
NME3-211ENST00000568561 OR9A2Q8NGT5 310 aa14.06□□□□□ -0.16
NME3-211ENST00000568561 TRPC4APQ8TEL6 797 aa14.06□□□□□ -0.16
NME3-211ENST00000568561 ZNF483Q8TF39 744 aaPredicted RBP14.06□□□□□ -0.16
NME3-211ENST00000568561 SMPDL3BQ92485 455 aa14.06□□□□□ -0.16
NME3-211ENST00000568561 EXOSC8Q96B26 276 aaKnown RBP14.06□□□□□ -0.16
NME3-211ENST00000568561 ZNF395Q9H8N7 513 aaPredicted RBP14.06□□□□□ -0.16
NME3-211ENST00000568561 KLHL28Q9NXS3 571 aa14.06□□□□□ -0.16
NME3-211ENST00000568561 PRODH2Q9UF12 536 aa14.06□□□□□ -0.16
NME3-211ENST00000568561 ZNF225Q9UK10 706 aa14.06□□□□□ -0.16
NME3-211ENST00000568561 EIF3LQ9Y262 564 aaKnown RBP14.06□□□□□ -0.16
NME3-211ENST00000568561 GPR55Q9Y2T6 319 aaPredicted RBP14.06□□□□□ -0.16
NME3-211ENST00000568561 TESMINQ9Y4I5 508 aa14.06□□□□□ -0.16
NME3-211ENST00000568561 ZNF780BQ9Y6R6 833 aa14.06□□□□□ -0.16
NME3-211ENST00000568561 DSCAMO60469 2012 aa14.05□□□□□ -0.16
NME3-211ENST00000568561 OR6C70A6NIJ9 312 aa14.05□□□□□ -0.16
NME3-211ENST00000568561 A8MT66 165 aa14.05□□□□□ -0.16
NME3-211ENST00000568561 A8MXE2 369 aa14.05□□□□□ -0.16
NME3-211ENST00000568561 CASKO14936 926 aa14.05□□□□□ -0.16
NME3-211ENST00000568561 TO15178 435 aa14.05□□□□□ -0.16
NME3-211ENST00000568561 OR4F21O95013 312 aa14.05□□□□□ -0.16
NME3-211ENST00000568561 IL3P08700 152 aa14.05□□□□□ -0.16
NME3-211ENST00000568561 SBK3P0C264 359 aa14.05□□□□□ -0.16
NME3-211ENST00000568561 CTAGE8P0CG41 777 aa14.05□□□□□ -0.16
NME3-211ENST00000568561 CT45A8P0DMV1 189 aa14.05□□□□□ -0.16
NME3-211ENST00000568561 CT45A9P0DMV2 189 aa14.05□□□□□ -0.16
NME3-211ENST00000568561 CHN1P15882 459 aa14.05□□□□□ -0.16
NME3-211ENST00000568561 ZNF708P17019 499 aa14.05□□□□□ -0.16
NME3-211ENST00000568561 GRK2P25098 689 aa14.05□□□□□ -0.16
NME3-211ENST00000568561 PHBP35232 272 aa14.05□□□□□ -0.16
NME3-211ENST00000568561 DIO3P55073 304 aa14.05□□□□□ -0.16
NME3-211ENST00000568561 FAM27E3Q08E93 113 aa14.05□□□□□ -0.16
NME3-211ENST00000568561 CT45A2Q5DJT8 189 aa14.05□□□□□ -0.16
NME3-211ENST00000568561 C10orf62Q5T681 223 aaPredicted RBP14.05□□□□□ -0.16
NME3-211ENST00000568561 LARP4Q71RC2 724 aaKnown RBP eCLIP14.05□□□□□ -0.16
NME3-211ENST00000568561 P4HA3Q7Z4N8 544 aa14.05□□□□□ -0.16
NME3-211ENST00000568561 CTAGE4Q8IX94 777 aa14.05□□□□□ -0.16
NME3-211ENST00000568561 CIARTQ8N365 385 aaPredicted RBP14.05□□□□□ -0.16
NME3-211ENST00000568561 CNEP1R1Q8N9A8 125 aa14.05□□□□□ -0.16
NME3-211ENST00000568561 OR4N2Q8NGD1 307 aa14.05□□□□□ -0.16
NME3-211ENST00000568561 EFHD2Q96C19 240 aaPredicted RBP14.05□□□□□ -0.16
NME3-211ENST00000568561 TMCO6Q96DC7 493 aa14.05□□□□□ -0.16
NME3-211ENST00000568561 SLC35A4Q96G79 324 aa14.05□□□□□ -0.16
NME3-211ENST00000568561 BTBD9Q96Q07 612 aa14.05□□□□□ -0.16
NME3-211ENST00000568561 FAIM2Q9BWQ8 316 aa14.05□□□□□ -0.16
NME3-211ENST00000568561 PIGMQ9H3S5 423 aa14.05□□□□□ -0.16
NME3-211ENST00000568561 PSME2Q9UL46 239 aa14.05□□□□□ -0.16
NME3-211ENST00000568561 TMCO1Q9UM00 188 aa14.05□□□□□ -0.16
NME3-211ENST00000568561 CSPG4Q6UVK1 2322 aa14.05□□□□□ -0.16
NME3-211ENST00000568561 H0YC42 278 aa14.04□□□□□ -0.16
NME3-211ENST00000568561 SCO2O43819 266 aa14.04□□□□□ -0.16
NME3-211ENST00000568561 TSPAN2O60636 221 aa14.04□□□□□ -0.16
NME3-211ENST00000568561 OTCP00480 354 aa14.04□□□□□ -0.16
NME3-211ENST00000568561 INHBAP08476 426 aa14.04□□□□□ -0.16
NME3-211ENST00000568561 DPP4P27487 766 aa14.04□□□□□ -0.16
NME3-211ENST00000568561 IL12BP29460 328 aa14.04□□□□□ -0.16
NME3-211ENST00000568561 CASQ1P31415 396 aa14.04□□□□□ -0.16
NME3-211ENST00000568561 CCKARP32238 428 aa14.04□□□□□ -0.16
NME3-211ENST00000568561 TPD52P55327 224 aaPredicted RBP14.04□□□□□ -0.16
NME3-211ENST00000568561 B3GALT5-AS1P59052 145 aa14.04□□□□□ -0.16
NME3-211ENST00000568561 SIRPAP78324 504 aa14.04□□□□□ -0.16
NME3-211ENST00000568561 AAGABQ6PD74 315 aa14.04□□□□□ -0.16
NME3-211ENST00000568561 CDYL2Q8N8U2 506 aa14.04□□□□□ -0.16
NME3-211ENST00000568561 UHMK1Q8TAS1 419 aaKnown RBP14.04□□□□□ -0.16
NME3-211ENST00000568561 ZNF592Q92610 1267 aa14.04□□□□□ -0.16
NME3-211ENST00000568561 PIK3IP1Q96FE7 263 aa14.04□□□□□ -0.16
NME3-211ENST00000568561 VSTM2LQ96N03 204 aa14.04□□□□□ -0.16
NME3-211ENST00000568561 FAM111AQ96PZ2 611 aa14.04□□□□□ -0.16
NME3-211ENST00000568561 UCN2Q96RP3 112 aa14.04□□□□□ -0.16
NME3-211ENST00000568561 PAFAH2Q99487 392 aa14.04□□□□□ -0.16
NME3-211ENST00000568561 PIGQQ9BRB3 760 aa14.04□□□□□ -0.16
NME3-211ENST00000568561 OPN3Q9H1Y3 402 aaPredicted RBP14.04□□□□□ -0.16
NME3-211ENST00000568561 ACBD3Q9H3P7 528 aa14.04□□□□□ -0.16
NME3-211ENST00000568561 CDC42EP4Q9H3Q1 356 aaKnown RBP14.04□□□□□ -0.16
NME3-211ENST00000568561 BRF2Q9HAW0 419 aa14.04□□□□□ -0.16
NME3-211ENST00000568561 FOLH1BQ9HBA9 442 aa14.04□□□□□ -0.16
NME3-211ENST00000568561 NDRG3Q9UGV2 375 aa14.04□□□□□ -0.16
NME3-211ENST00000568561 TRPS1Q9UHF7 1281 aa14.04□□□□□ -0.16
NME3-211ENST00000568561 SNX6Q9UNH7 406 aa14.04□□□□□ -0.16
NME3-211ENST00000568561 DLGAP4Q9Y2H0 992 aa14.04□□□□□ -0.16
NME3-211ENST00000568561 RAI1Q7Z5J4 1906 aaPredicted RBP14.03□□□□□ -0.16
NME3-211ENST00000568561 SLC22A20A6NK97 555 aa14.03□□□□□ -0.16
NME3-211ENST00000568561 DEFB108AA8MXU0 73 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms