RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 PLOD3O60568 738 aa13.2□□□□□ -0.3
CMTM3-215ENST00000568477 TRIM13O60858 407 aa13.2□□□□□ -0.3
CMTM3-215ENST00000568477 UGT2B11O75310 529 aa13.2□□□□□ -0.3
CMTM3-215ENST00000568477 ERN1O75460 977 aaKnown RBP13.2□□□□□ -0.3
CMTM3-215ENST00000568477 TOXO94900 526 aa13.2□□□□□ -0.3
CMTM3-215ENST00000568477 HPNP05981 417 aa13.2□□□□□ -0.3
CMTM3-215ENST00000568477 FREM3P0C091 2139 aa13.2□□□□□ -0.3
CMTM3-215ENST00000568477 SSTR2P30874 369 aa13.2□□□□□ -0.3
CMTM3-215ENST00000568477 NTSP30990 170 aa13.2□□□□□ -0.3
CMTM3-215ENST00000568477 PSPHP78330 225 aa13.2□□□□□ -0.3
CMTM3-215ENST00000568477 GUCY1A3Q02108 690 aa13.2□□□□□ -0.3
CMTM3-215ENST00000568477 SNTA1Q13424 505 aa13.2□□□□□ -0.3
CMTM3-215ENST00000568477 PCLAFQ15004 111 aa13.2□□□□□ -0.3
CMTM3-215ENST00000568477 TOMM20Q15388 145 aa13.2□□□□□ -0.3
CMTM3-215ENST00000568477 CLEC6AQ6EIG7 209 aa13.2□□□□□ -0.3
CMTM3-215ENST00000568477 DESI1Q6ICB0 168 aa13.2□□□□□ -0.3
CMTM3-215ENST00000568477 FAM71E1Q6IPT2 247 aa13.2□□□□□ -0.3
CMTM3-215ENST00000568477 ANGPTL8Q6UXH0 198 aa13.2□□□□□ -0.3
CMTM3-215ENST00000568477 IKBIPQ70UQ0 350 aa13.2□□□□□ -0.3
CMTM3-215ENST00000568477 ULK2Q8IYT8 1036 aa13.2□□□□□ -0.3
CMTM3-215ENST00000568477 ACBD4Q8NC06 268 aa13.2□□□□□ -0.3
CMTM3-215ENST00000568477 OR1J4Q8NGS1 313 aa13.2□□□□□ -0.3
CMTM3-215ENST00000568477 TMBIM1Q969X1 311 aa13.2□□□□□ -0.3
CMTM3-215ENST00000568477 NTNG2Q96CW9 530 aa13.2□□□□□ -0.3
CMTM3-215ENST00000568477 APOPT1Q96IL0 206 aa13.2□□□□□ -0.3
CMTM3-215ENST00000568477 METTL2AQ96IZ6 378 aaKnown RBP13.2□□□□□ -0.3
CMTM3-215ENST00000568477 VSTM2LQ96N03 204 aa13.2□□□□□ -0.3
CMTM3-215ENST00000568477 COL21A1Q96P44 957 aa13.2□□□□□ -0.3
CMTM3-215ENST00000568477 GNRHR2Q96P88 292 aa13.2□□□□□ -0.3
CMTM3-215ENST00000568477 UCK2Q9BZX2 261 aa13.2□□□□□ -0.3
CMTM3-215ENST00000568477 FOLH1BQ9HBA9 442 aa13.2□□□□□ -0.3
CMTM3-215ENST00000568477 KLRF1Q9NZS2 232 aa13.2□□□□□ -0.3
CMTM3-215ENST00000568477 FBN2P35556 2912 aa13.19□□□□□ -0.3
CMTM3-215ENST00000568477 A0A0G2JNJ9 132 aa13.19□□□□□ -0.3
CMTM3-215ENST00000568477 OR6C70A6NIJ9 312 aa13.19□□□□□ -0.3
CMTM3-215ENST00000568477 MYO1GB0I1T2 1018 aa13.19□□□□□ -0.3
CMTM3-215ENST00000568477 SLC28A1O00337 649 aa13.19□□□□□ -0.3
CMTM3-215ENST00000568477 AZIN1O14977 448 aa13.19□□□□□ -0.3
CMTM3-215ENST00000568477 SNPHO15079 494 aa13.19□□□□□ -0.3
CMTM3-215ENST00000568477 RGS14O43566 566 aa13.19□□□□□ -0.3
CMTM3-215ENST00000568477 ABCB7O75027 752 aa13.19□□□□□ -0.3
CMTM3-215ENST00000568477 COQ9O75208 318 aa13.19□□□□□ -0.3
CMTM3-215ENST00000568477 SEC22BO75396 215 aa13.19□□□□□ -0.3
CMTM3-215ENST00000568477 REM1O75628 298 aa13.19□□□□□ -0.3
CMTM3-215ENST00000568477 SLITRK5O94991 958 aa13.19□□□□□ -0.3
CMTM3-215ENST00000568477 CHEK2O96017 543 aa13.19□□□□□ -0.3
CMTM3-215ENST00000568477 NEFHP12036 1026 aa13.19□□□□□ -0.3
CMTM3-215ENST00000568477 PTPN6P29350 595 aa13.19□□□□□ -0.3
CMTM3-215ENST00000568477 LSP1P33241 339 aa13.19□□□□□ -0.3
CMTM3-215ENST00000568477 KRT20P35900 424 aa13.19□□□□□ -0.3
CMTM3-215ENST00000568477 ZFP36L2P47974 494 aaKnown RBP13.19□□□□□ -0.3
CMTM3-215ENST00000568477 NCBP2P52298 156 aaKnown RBP eCLIP13.19□□□□□ -0.3
CMTM3-215ENST00000568477 CORO7P57737 925 aa13.19□□□□□ -0.3
CMTM3-215ENST00000568477 CRYZQ08257 329 aaKnown RBP13.19□□□□□ -0.3
CMTM3-215ENST00000568477 ZNF155Q12901 538 aaPredicted RBP13.19□□□□□ -0.3
CMTM3-215ENST00000568477 RIPPLY2Q5TAB7 128 aa13.19□□□□□ -0.3
CMTM3-215ENST00000568477 NOXRED1Q6NXP6 359 aa13.19□□□□□ -0.3
CMTM3-215ENST00000568477 ZNF295-AS1Q8N0V1 137 aa13.19□□□□□ -0.3
CMTM3-215ENST00000568477 BANPQ8N9N5 519 aa13.19□□□□□ -0.3
CMTM3-215ENST00000568477 OR7G2Q8NG99 324 aa13.19□□□□□ -0.3
CMTM3-215ENST00000568477 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.19□□□□□ -0.3
CMTM3-215ENST00000568477 TMCO6Q96DC7 493 aa13.19□□□□□ -0.3
CMTM3-215ENST00000568477 TREX2Q9BQ50 279 aaPredicted RBP13.19□□□□□ -0.3
CMTM3-215ENST00000568477 GATA5Q9BWX5 397 aaPredicted RBP13.19□□□□□ -0.3
CMTM3-215ENST00000568477 NPDC1Q9NQX5 325 aaPredicted RBP13.19□□□□□ -0.3
CMTM3-215ENST00000568477 INTS9Q9NV88 658 aaKnown RBP13.19□□□□□ -0.3
CMTM3-215ENST00000568477 TAS2R9Q9NYW1 312 aa13.19□□□□□ -0.3
CMTM3-215ENST00000568477 TAS2R7Q9NYW3 318 aa13.19□□□□□ -0.3
CMTM3-215ENST00000568477 Q9UFV3 132 aa13.19□□□□□ -0.3
CMTM3-215ENST00000568477 FIS1Q9Y3D6 152 aa13.19□□□□□ -0.3
CMTM3-215ENST00000568477 A0A087WV62 115 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 TMEM120BA0PK00 339 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 NPIPB8E9PQR5 432 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 ICOSLGO75144 302 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 NME6O75414 186 aaPredicted RBP13.18□□□□□ -0.3
CMTM3-215ENST00000568477 JUNP05412 331 aaKnown RBP13.18□□□□□ -0.3
CMTM3-215ENST00000568477 CT45A8P0DMV1 189 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 CT45A9P0DMV2 189 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 PRPH2P23942 346 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 MSX1P28360 303 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 IL12BP29460 328 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 GCKP35557 465 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 ADH7P40394 386 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 PTGDSP41222 190 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 TFF3Q07654 80 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 EFR3AQ14156 821 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 EIPR1Q53HC9 387 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 CT45A2Q5DJT8 189 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 NPSR1Q6W5P4 371 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 SLC44A2Q8IWA5 706 aaPredicted RBP13.18□□□□□ -0.3
CMTM3-215ENST00000568477 HOMEZQ8IX15 550 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 PM20D2Q8IYS1 436 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 C14orf79Q96F83 325 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 SLC35A4Q96G79 324 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 LURAP1Q96LR2 239 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 FAM111AQ96PZ2 611 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 ADOQ96SZ5 270 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 TIMP4Q99727 224 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 CCDC134Q9H6E4 229 aa13.18□□□□□ -0.3
CMTM3-215ENST00000568477 LRTM1Q9HBL6 345 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms