RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 PRSS41Q7RTY9 318 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 KANSL1Q7Z3B3 1105 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 OR9A4Q8NGU2 314 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 ADAMTS15Q8TE58 950 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 PMM1Q92871 262 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 RMND5BQ96G75 393 aaPredicted RBP13.66□□□□□ -0.22
COMMD4-221ENST00000567935 PIP5K1AQ99755 562 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 DPYSL5Q9BPU6 564 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 PSD2Q9BQI7 771 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 MRPS26Q9BYN8 205 aaKnown RBP13.66□□□□□ -0.22
COMMD4-221ENST00000567935 CACYBPQ9HB71 228 aaKnown RBP13.66□□□□□ -0.22
COMMD4-221ENST00000567935 CPNE5Q9HCH3 593 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 ENOPH1Q9UHY7 261 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 CABIN1Q9Y6J0 2220 aa13.66□□□□□ -0.22
COMMD4-221ENST00000567935 CCDC88CQ9P219 2028 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 TNFRSF11BO00300 401 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 SYT5O00445 386 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 SLC16A6O15403 523 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 FGF17O60258 216 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 BRINP1O60477 761 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 UGT2B11O75310 529 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 JRKO75564 520 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 FESP07332 822 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 ANXA8P13928 327 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 RRM2P31350 389 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 OR1D5P58170 312 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 OLR1P78380 273 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 TARDBPQ13148 414 aaKnown RBP eCLIP13.65□□□□□ -0.22
COMMD4-221ENST00000567935 NR0B2Q15466 257 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 LTB4RQ15722 352 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 MAPK11Q15759 364 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 CLPPQ16740 277 aaPredicted RBP13.65□□□□□ -0.22
COMMD4-221ENST00000567935 KDM4DQ6B0I6 523 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 HEPHL1Q6MZM0 1159 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 FAHD1Q6P587 224 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 C16orf62Q7Z3J2 963 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 SLC44A2Q8IWA5 706 aaPredicted RBP13.65□□□□□ -0.22
COMMD4-221ENST00000567935 D2HGDHQ8N465 521 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 CDRT4Q8N9R6 151 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 OR7G2Q8NG99 324 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 OR5D16Q8NGK9 328 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 OR4C6Q8NH72 309 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 APOBEC4Q8WW27 367 aaKnown RBP13.65□□□□□ -0.22
COMMD4-221ENST00000567935 GIMAP5Q96F15 307 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 MAGED4Q96JG8 741 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 SLC41A2Q96JW4 573 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 ZNF578Q96N58 590 aaPredicted RBP13.65□□□□□ -0.22
COMMD4-221ENST00000567935 COL21A1Q96P44 957 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 STACQ99469 402 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 PINK1Q9BXM7 581 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 FAM192AQ9GZU8 254 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 TOR3AQ9H497 397 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 SMURF2Q9HAU4 748 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 IRAK4Q9NWZ3 460 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 VNN3Q9NY84 501 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 PDP1Q9P0J1 537 aaPredicted RBP13.65□□□□□ -0.22
COMMD4-221ENST00000567935 KIF17Q9P2E2 1029 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 CDC14AQ9UNH5 594 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 SLC9A8Q9Y2E8 581 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 HSPE1-MOB4S4R3N1 261 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 U3KQV3 271 aa13.65□□□□□ -0.22
COMMD4-221ENST00000567935 DSPPQ9NZW4 1301 aa13.64□□□□□ -0.23
COMMD4-221ENST00000567935 A0A0A6YYC8 382 aaPredicted RBP13.64□□□□□ -0.23
COMMD4-221ENST00000567935 SYNDIG1LA6NDD5 238 aa13.64□□□□□ -0.23
COMMD4-221ENST00000567935 TTC36A6NLP5 189 aa13.64□□□□□ -0.23
COMMD4-221ENST00000567935 H3BNH8 94 aa13.64□□□□□ -0.23
COMMD4-221ENST00000567935 I3L1I5 382 aaPredicted RBP13.64□□□□□ -0.23
COMMD4-221ENST00000567935 ZNF749O43361 778 aa13.64□□□□□ -0.23
COMMD4-221ENST00000567935 HCRTR1O43613 425 aa13.64□□□□□ -0.23
COMMD4-221ENST00000567935 FOXS1O43638 330 aa13.64□□□□□ -0.23
COMMD4-221ENST00000567935 KIF1CO43896 1103 aaKnown RBP13.64□□□□□ -0.23
COMMD4-221ENST00000567935 CTNSO60931 367 aa13.64□□□□□ -0.23
COMMD4-221ENST00000567935 NT5EP21589 574 aa13.64□□□□□ -0.23
COMMD4-221ENST00000567935 GALNSP34059 522 aa13.64□□□□□ -0.23
COMMD4-221ENST00000567935 SNRPNP63162 240 aaKnown RBP13.64□□□□□ -0.23
COMMD4-221ENST00000567935 TUBA4AP68366 448 aa13.64□□□□□ -0.23
COMMD4-221ENST00000567935 IGLV3-21P80748 117 aaPredicted RBP13.64□□□□□ -0.23
COMMD4-221ENST00000567935 SPIBQ01892 262 aa13.64□□□□□ -0.23
COMMD4-221ENST00000567935 MAP4K2Q12851 820 aa13.64□□□□□ -0.23
COMMD4-221ENST00000567935 SYPL1Q16563 259 aa13.64□□□□□ -0.23
COMMD4-221ENST00000567935 GPAT3Q53EU6 434 aa13.64□□□□□ -0.23
COMMD4-221ENST00000567935 RPS26P11Q5JNZ5 115 aaPredicted RBP13.64□□□□□ -0.23
COMMD4-221ENST00000567935 EXOSC6Q5RKV6 272 aaKnown RBP13.64□□□□□ -0.23
COMMD4-221ENST00000567935 FHL5Q5TD97 284 aa13.64□□□□□ -0.23
COMMD4-221ENST00000567935 TTC33Q6PID6 262 aaPredicted RBP13.64□□□□□ -0.23
COMMD4-221ENST00000567935 TMEM179BQ7Z7N9 219 aa13.64□□□□□ -0.23
COMMD4-221ENST00000567935 C8orf59Q8N0T1 100 aaPredicted RBP13.64□□□□□ -0.23
COMMD4-221ENST00000567935 SETD9Q8NE22 299 aa13.64□□□□□ -0.23
COMMD4-221ENST00000567935 PIK3C3Q8NEB9 887 aa13.64□□□□□ -0.23
COMMD4-221ENST00000567935 OR5T3Q8NGG3 340 aa13.64□□□□□ -0.23
COMMD4-221ENST00000567935 OR4C15Q8NGM1 316 aa13.64□□□□□ -0.23
COMMD4-221ENST00000567935 GIPC3Q8TF64 312 aa13.64□□□□□ -0.23
COMMD4-221ENST00000567935 KAT2AQ92830 837 aa13.64□□□□□ -0.23
COMMD4-221ENST00000567935 NAT6Q93015 286 aa13.64□□□□□ -0.23
COMMD4-221ENST00000567935 ANKRD9Q96BM1 317 aaPredicted RBP13.64□□□□□ -0.23
COMMD4-221ENST00000567935 NRSN2Q9GZP1 204 aa13.64□□□□□ -0.23
COMMD4-221ENST00000567935 PIGUQ9H490 435 aa13.64□□□□□ -0.23
COMMD4-221ENST00000567935 EVA1AQ9H8M9 152 aa13.64□□□□□ -0.23
COMMD4-221ENST00000567935 DUSP22Q9NRW4 184 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms