RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 MICAQ29983 383 aa3.54□□□□□ -1.84
SHCBP1-206ENST00000567698 PNCKQ6P2M8 343 aa3.54□□□□□ -1.84
SHCBP1-206ENST00000567698 ZNF562Q6V9R5 426 aa3.54□□□□□ -1.84
SHCBP1-206ENST00000567698 GPBP1Q86WP2 473 aa3.54□□□□□ -1.84
SHCBP1-206ENST00000567698 KDM8Q8N371 416 aa3.54□□□□□ -1.84
SHCBP1-206ENST00000567698 HDDC3Q8N4P3 179 aa3.54□□□□□ -1.84
SHCBP1-206ENST00000567698 ARL10Q8N8L6 244 aa3.54□□□□□ -1.84
SHCBP1-206ENST00000567698 NFAM1Q8NET5 270 aaPredicted RBP3.54□□□□□ -1.84
SHCBP1-206ENST00000567698 OR56B1Q8NGI3 324 aa3.54□□□□□ -1.84
SHCBP1-206ENST00000567698 RHOXF1Q8NHV9 184 aa3.54□□□□□ -1.84
SHCBP1-206ENST00000567698 ZPLD1Q8TCW7 415 aa3.54□□□□□ -1.84
SHCBP1-206ENST00000567698 MCHR2Q969V1 340 aa3.54□□□□□ -1.84
SHCBP1-206ENST00000567698 C9orf85Q96MD7 179 aa3.54□□□□□ -1.84
SHCBP1-206ENST00000567698 NAP1L5Q96NT1 182 aaPredicted RBP3.54□□□□□ -1.84
SHCBP1-206ENST00000567698 IKZF5Q9H5V7 419 aa3.54□□□□□ -1.84
SHCBP1-206ENST00000567698 MEPEQ9NQ76 525 aaPredicted RBP3.54□□□□□ -1.84
SHCBP1-206ENST00000567698 FAM120CQ9NX05 1096 aaKnown RBP3.54□□□□□ -1.84
SHCBP1-206ENST00000567698 SOHLH2Q9NX45 425 aa3.54□□□□□ -1.84
SHCBP1-206ENST00000567698 IMPAD1Q9NX62 359 aa3.54□□□□□ -1.84
SHCBP1-206ENST00000567698 SLC9A8Q9Y2E8 581 aa3.54□□□□□ -1.84
SHCBP1-206ENST00000567698 CFAP65Q6ZU64 1925 aaKnown RBP3.54□□□□□ -1.84
SHCBP1-206ENST00000567698 A0A0J9YVX5 310 aa3.53□□□□□ -1.84
SHCBP1-206ENST00000567698 FAM168BA1KXE4 195 aa3.53□□□□□ -1.84
SHCBP1-206ENST00000567698 TRABD2BA6NFA1 517 aa3.53□□□□□ -1.84
SHCBP1-206ENST00000567698 FAM220BPB1ANY3 271 aa3.53□□□□□ -1.84
SHCBP1-206ENST00000567698 MT-ATP6P00846 226 aa3.53□□□□□ -1.84
SHCBP1-206ENST00000567698 CT45A10P0DMU9 189 aa3.53□□□□□ -1.84
SHCBP1-206ENST00000567698 HSPA1LP34931 641 aa3.53□□□□□ -1.84
SHCBP1-206ENST00000567698 ALDH3B2P48448 385 aa3.53□□□□□ -1.84
SHCBP1-206ENST00000567698 RPL34P49207 117 aaKnown RBP3.53□□□□□ -1.84
SHCBP1-206ENST00000567698 GABPB1Q06547 395 aaPredicted RBP3.53□□□□□ -1.84
SHCBP1-206ENST00000567698 RNF212Q495C1 297 aa3.53□□□□□ -1.84
SHCBP1-206ENST00000567698 CCDC40Q4G0X9 1142 aa3.53□□□□□ -1.84
SHCBP1-206ENST00000567698 ADCK1Q86TW2 530 aa3.53□□□□□ -1.84
SHCBP1-206ENST00000567698 CD177Q8N6Q3 437 aa3.53□□□□□ -1.84
SHCBP1-206ENST00000567698 ATG10Q9H0Y0 220 aa3.53□□□□□ -1.84
SHCBP1-206ENST00000567698 SLITRK2Q9H156 845 aa3.53□□□□□ -1.84
SHCBP1-206ENST00000567698 TNFRSF19Q9NS68 423 aa3.53□□□□□ -1.84
SHCBP1-206ENST00000567698 TP53TG3Q9ULZ0 132 aa3.53□□□□□ -1.84
SHCBP1-206ENST00000567698 NTNG1Q9Y2I2 539 aa3.53□□□□□ -1.84
SHCBP1-206ENST00000567698 RNF103-CHMP3A0A140T963 221 aa3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 NPIPA2E9PIF3 369 aa3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 H0YL77 283 aa3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 SLC17A2O00624 439 aa3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 CDX4O14627 284 aaPredicted RBP3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 TM9SF1O15321 606 aa3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 CFLARO15519 480 aa3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 PTBP3O95758 552 aaKnown RBP3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 ALPIP09923 528 aa3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 GAP43P17677 238 aa3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 IDSP22304 550 aa3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 IL2RGP31785 369 aa3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 NUMBP49757 651 aa3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 ARHGDIBP52566 201 aa3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 PPIAP62937 165 aaKnown RBP3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 MRPS6P82932 125 aaKnown RBP3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 IL1RL1Q01638 556 aa3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 PARP6Q2NL67 630 aa3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 CNPY1Q3B7I2 92 aa3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 TMEM52BQ4KMG9 183 aa3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 DMKNQ6E0U4 476 aaPredicted RBP3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 UNC5CLQ8IV45 518 aa3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 FAM71CQ8NEG0 241 aa3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 OR52J3Q8NH60 311 aa3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 VN1R17PQ8TDU5 208 aa3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 U2AF1L4Q8WU68 220 aaKnown RBP3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 NCLNQ969V3 563 aa3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 CCDC47Q96A33 483 aaKnown RBP3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 C14orf79Q96F83 325 aa3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 PPP1R16AQ96I34 528 aa3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 CCT8L2Q96SF2 557 aa3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 TSPAN18Q96SJ8 248 aa3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 NMNAT2Q9BZQ4 307 aa3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 DCAF13Q9NV06 445 aaKnown RBP3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 P2RX2Q9UBL9 471 aa3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 ZNF490Q9ULM2 529 aaPredicted RBP3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 PLA2G4CQ9UP65 541 aa3.52□□□□□ -1.85
SHCBP1-206ENST00000567698 KRTAP9-6A8MVA2 160 aa3.51□□□□□ -1.85
SHCBP1-206ENST00000567698 ALOX15BO15296 676 aa3.51□□□□□ -1.85
SHCBP1-206ENST00000567698 LATO43561 262 aa3.51□□□□□ -1.85
SHCBP1-206ENST00000567698 PRAMEF12O95522 483 aa3.51□□□□□ -1.85
SHCBP1-206ENST00000567698 SLC2A10O95528 541 aa3.51□□□□□ -1.85
SHCBP1-206ENST00000567698 GSTA1P08263 222 aa3.51□□□□□ -1.85
SHCBP1-206ENST00000567698 SLC35E2P0CK97 266 aa3.51□□□□□ -1.85
SHCBP1-206ENST00000567698 CCDC192P0DO97 292 aa3.51□□□□□ -1.85
SHCBP1-206ENST00000567698 CCNA2P20248 432 aa3.51□□□□□ -1.85
SHCBP1-206ENST00000567698 IL10P22301 178 aa3.51□□□□□ -1.85
SHCBP1-206ENST00000567698 MDH2P40926 338 aaKnown RBP3.51□□□□□ -1.85
SHCBP1-206ENST00000567698 STK19P49842 368 aaPredicted RBP3.51□□□□□ -1.85
SHCBP1-206ENST00000567698 MEOX2P50222 304 aa3.51□□□□□ -1.85
SHCBP1-206ENST00000567698 GPC3P51654 580 aa3.51□□□□□ -1.85
SHCBP1-206ENST00000567698 KARSQ15046 597 aaKnown RBP3.51□□□□□ -1.85
SHCBP1-206ENST00000567698 PRR30Q53SZ7 412 aaPredicted RBP3.51□□□□□ -1.85
SHCBP1-206ENST00000567698 CNSTQ6PJW8 725 aa3.51□□□□□ -1.85
SHCBP1-206ENST00000567698 NET1Q7Z628 596 aaPredicted RBP3.51□□□□□ -1.85
SHCBP1-206ENST00000567698 GPR137CQ8N3F9 429 aa3.51□□□□□ -1.85
SHCBP1-206ENST00000567698 SPEM1Q8N4L4 309 aa3.51□□□□□ -1.85
SHCBP1-206ENST00000567698 CNNM3Q8NE01 707 aa3.51□□□□□ -1.85
SHCBP1-206ENST00000567698 RFESDQ8TAC1 157 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms