RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 FAM111BQ6SJ93 734 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 CHDHQ8NE62 594 aaPredicted RBP8.38□□□□□ -1.07
CDH13-210ENST00000567445 FAM83FQ8NEG4 500 aaPredicted RBP8.38□□□□□ -1.07
CDH13-210ENST00000567445 OR1J4Q8NGS1 313 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 MED12Q93074 2177 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 ABTB1Q969K4 478 aaPredicted RBP8.38□□□□□ -1.07
CDH13-210ENST00000567445 RMND5BQ96G75 393 aaPredicted RBP8.38□□□□□ -1.07
CDH13-210ENST00000567445 PAFAH2Q99487 392 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 MRPL57Q9BQC6 102 aaKnown RBP8.38□□□□□ -1.07
CDH13-210ENST00000567445 ITPAQ9BY32 194 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 UGT2B28Q9BY64 529 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 TSPYL1Q9H0U9 437 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 MRPL46Q9H2W6 279 aaKnown RBP8.38□□□□□ -1.07
CDH13-210ENST00000567445 CDC42EP4Q9H3Q1 356 aaKnown RBP8.38□□□□□ -1.07
CDH13-210ENST00000567445 CALHM2Q9HA72 323 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 BRF2Q9HAW0 419 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 FARSBQ9NSD9 589 aaKnown RBP8.38□□□□□ -1.07
CDH13-210ENST00000567445 CCM2LQ9NUG4 571 aaPredicted RBP8.38□□□□□ -1.07
CDH13-210ENST00000567445 MAT2BQ9NZL9 334 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 FETUBQ9UGM5 382 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 BCAP29Q9UHQ4 241 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 ZNF639Q9UID6 485 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 ST6GALNAC2Q9UJ37 374 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 PSME2Q9UL46 239 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 EDARQ9UNE0 448 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 SNX6Q9UNH7 406 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 CAMK2AQ9UQM7 478 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.38□□□□□ -1.07
CDH13-210ENST00000567445 ZNF469Q96JG9 3925 aaPredicted RBP8.37□□□□□ -1.07
CDH13-210ENST00000567445 A0A1B0GTL3 188 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 MBD3L4A6NDZ8 208 aaPredicted RBP8.37□□□□□ -1.07
CDH13-210ENST00000567445 MBD3L3A6NE82 208 aaPredicted RBP8.37□□□□□ -1.07
CDH13-210ENST00000567445 MBD3L5A6NJ08 208 aaPredicted RBP8.37□□□□□ -1.07
CDH13-210ENST00000567445 CD8B2A6NJW9 211 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 PPP6CO00743 305 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 ACOX3O15254 700 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 KRT38O76015 456 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 PDYNP01213 254 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 RHOXF2BP0C7M4 288 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 CD99P14209 185 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 CTSSP25774 331 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 CNTFP26441 200 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 NAGLUP54802 743 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 CDH13P55290 713 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 DCAF7P61962 342 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 PLCXD2Q0VAA5 305 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 GALNT1Q10472 559 aaPredicted RBP8.37□□□□□ -1.07
CDH13-210ENST00000567445 SNTA1Q13424 505 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 MPP2Q14168 576 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 EXOSC7Q15024 291 aaKnown RBP8.37□□□□□ -1.07
CDH13-210ENST00000567445 DAZAP2Q15038 168 aaPredicted RBP8.37□□□□□ -1.07
CDH13-210ENST00000567445 DCST1Q5T197 706 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 LETMD1Q6P1Q0 360 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 ANGPTL8Q6UXH0 198 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 RPS27LQ71UM5 84 aaKnown RBP8.37□□□□□ -1.07
CDH13-210ENST00000567445 NUP54Q7Z3B4 507 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 LSRQ86X29 649 aaPredicted RBP8.37□□□□□ -1.07
CDH13-210ENST00000567445 KIF18BQ86Y91 864 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 MMP21Q8N119 569 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 ADCY4Q8NFM4 1077 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 GOT1L1Q8NHS2 421 aaPredicted RBP8.37□□□□□ -1.07
CDH13-210ENST00000567445 MBD3L2Q8NHZ7 208 aaPredicted RBP8.37□□□□□ -1.07
CDH13-210ENST00000567445 ZNF483Q8TF39 744 aaPredicted RBP8.37□□□□□ -1.07
CDH13-210ENST00000567445 SELENOMQ8WWX9 145 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 HGDQ93099 445 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 TM4SF18Q96CE8 201 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 CTHRC1Q96CG8 243 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 KLHL29Q96CT2 875 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 OMA1Q96E52 524 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 WDYHV1Q96HA8 205 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 LCORQ96JN0 433 aaPredicted RBP8.37□□□□□ -1.07
CDH13-210ENST00000567445 TRIB1Q96RU8 372 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 FAIM2Q9BWQ8 316 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 C1QTNF3Q9BXJ4 246 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 LIME1Q9H400 295 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 NMRK1Q9NWW6 199 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 CBLCQ9ULV8 474 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 PLLPQ9Y342 182 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 ACANP16112 2415 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 DOCK7Q96N67 2140 aa8.37□□□□□ -1.07
CDH13-210ENST00000567445 HRNRQ86YZ3 2850 aaPredicted RBP8.36□□□□□ -1.07
CDH13-210ENST00000567445 KIAA1549Q9HCM3 1950 aa8.36□□□□□ -1.07
CDH13-210ENST00000567445 TUBAL3A6NHL2 446 aa8.36□□□□□ -1.07
CDH13-210ENST00000567445 A8MT66 165 aa8.36□□□□□ -1.07
CDH13-210ENST00000567445 TRIM49D1C9J1S8 452 aa8.36□□□□□ -1.07
CDH13-210ENST00000567445 ICOSLGO75144 302 aa8.36□□□□□ -1.07
CDH13-210ENST00000567445 CBX7O95931 251 aa8.36□□□□□ -1.07
CDH13-210ENST00000567445 SCGB1D2O95969 90 aa8.36□□□□□ -1.07
CDH13-210ENST00000567445 IL18BPO95998 194 aa8.36□□□□□ -1.07
CDH13-210ENST00000567445 ACTL6AO96019 429 aa8.36□□□□□ -1.07
CDH13-210ENST00000567445 SBK3P0C264 359 aa8.36□□□□□ -1.07
CDH13-210ENST00000567445 CYP4B1P13584 511 aa8.36□□□□□ -1.07
CDH13-210ENST00000567445 DRD5P21918 477 aa8.36□□□□□ -1.07
CDH13-210ENST00000567445 DNASE1P24855 282 aa8.36□□□□□ -1.07
CDH13-210ENST00000567445 TACR1P25103 407 aa8.36□□□□□ -1.07
CDH13-210ENST00000567445 OPRM1P35372 400 aa8.36□□□□□ -1.07
CDH13-210ENST00000567445 GCKP35557 465 aa8.36□□□□□ -1.07
CDH13-210ENST00000567445 SOX18P35713 384 aa8.36□□□□□ -1.07
CDH13-210ENST00000567445 PTGDSP41222 190 aa8.36□□□□□ -1.07
CDH13-210ENST00000567445 PPICP45877 212 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms