RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 SRYQ05066 204 aa8.76□□□□□ -1.01
CAPN3-216ENST00000567071 SP140Q13342 867 aa8.76□□□□□ -1.01
CAPN3-216ENST00000567071 TGFBIQ15582 683 aa8.76□□□□□ -1.01
CAPN3-216ENST00000567071 ELAVL1Q15717 326 aaKnown RBP8.76□□□□□ -1.01
CAPN3-216ENST00000567071 PPP1R3AQ16821 1122 aa8.76□□□□□ -1.01
CAPN3-216ENST00000567071 AWAT1Q58HT5 328 aa8.76□□□□□ -1.01
CAPN3-216ENST00000567071 FBXO48Q5FWF7 155 aa8.76□□□□□ -1.01
CAPN3-216ENST00000567071 DCST1Q5T197 706 aa8.76□□□□□ -1.01
CAPN3-216ENST00000567071 ZNF474Q6S9Z5 364 aaPredicted RBP8.76□□□□□ -1.01
CAPN3-216ENST00000567071 ZCCHC23Q6ZST2 131 aa8.76□□□□□ -1.01
CAPN3-216ENST00000567071 NUDCD3Q8IVD9 361 aa8.76□□□□□ -1.01
CAPN3-216ENST00000567071 PTGR2Q8N8N7 351 aaPredicted RBP8.76□□□□□ -1.01
CAPN3-216ENST00000567071 ZNF740Q8NDX6 193 aa8.76□□□□□ -1.01
CAPN3-216ENST00000567071 SEMA6DQ8NFY4 1073 aa8.76□□□□□ -1.01
CAPN3-216ENST00000567071 RHEBL1Q8TAI7 183 aa8.76□□□□□ -1.01
CAPN3-216ENST00000567071 RDH11Q8TC12 318 aa8.76□□□□□ -1.01
CAPN3-216ENST00000567071 ZNF418Q8TF45 676 aaPredicted RBP8.76□□□□□ -1.01
CAPN3-216ENST00000567071 ASB11Q8WXH4 323 aa8.76□□□□□ -1.01
CAPN3-216ENST00000567071 TP53INP1Q96A56 240 aa8.76□□□□□ -1.01
CAPN3-216ENST00000567071 MSI2Q96DH6 328 aaKnown RBP8.76□□□□□ -1.01
CAPN3-216ENST00000567071 STARD4Q96DR4 205 aa8.76□□□□□ -1.01
CAPN3-216ENST00000567071 SPACA9Q96E40 222 aaPredicted RBP8.76□□□□□ -1.01
CAPN3-216ENST00000567071 PHF21BQ96EK2 531 aa8.76□□□□□ -1.01
CAPN3-216ENST00000567071 ZNF845Q96IR2 970 aaPredicted RBP8.76□□□□□ -1.01
CAPN3-216ENST00000567071 UCN2Q96RP3 112 aa8.76□□□□□ -1.01
CAPN3-216ENST00000567071 TACO1Q9BSH4 297 aaKnown RBP8.76□□□□□ -1.01
CAPN3-216ENST00000567071 ZNF747Q9BV97 191 aa8.76□□□□□ -1.01
CAPN3-216ENST00000567071 OPN3Q9H1Y3 402 aaPredicted RBP8.76□□□□□ -1.01
CAPN3-216ENST00000567071 ARL15Q9NXU5 204 aa8.76□□□□□ -1.01
CAPN3-216ENST00000567071 NUDT4Q9NZJ9 180 aa8.76□□□□□ -1.01
CAPN3-216ENST00000567071 COPS7AQ9UBW8 275 aa8.76□□□□□ -1.01
CAPN3-216ENST00000567071 PDE10AQ9Y233 779 aa8.76□□□□□ -1.01
CAPN3-216ENST00000567071 OARD1Q9Y530 152 aa8.76□□□□□ -1.01
CAPN3-216ENST00000567071 PCDHGB1Q9Y5G3 927 aa8.76□□□□□ -1.01
CAPN3-216ENST00000567071 URADA6NGE7 173 aa8.75□□□□□ -1.01
CAPN3-216ENST00000567071 MYO1CO00159 1063 aa8.75□□□□□ -1.01
CAPN3-216ENST00000567071 NDUFS4O43181 175 aa8.75□□□□□ -1.01
CAPN3-216ENST00000567071 SERPIND1P05546 499 aa8.75□□□□□ -1.01
CAPN3-216ENST00000567071 ENO2P09104 434 aaPredicted RBP8.75□□□□□ -1.01
CAPN3-216ENST00000567071 APEHP13798 732 aaKnown RBP8.75□□□□□ -1.01
CAPN3-216ENST00000567071 MTHFD2P13995 350 aa8.75□□□□□ -1.01
CAPN3-216ENST00000567071 CPN1P15169 458 aa8.75□□□□□ -1.01
CAPN3-216ENST00000567071 ATP5F1P24539 256 aaPredicted RBP8.75□□□□□ -1.01
CAPN3-216ENST00000567071 PTPN6P29350 595 aa8.75□□□□□ -1.01
CAPN3-216ENST00000567071 MDH1P40925 334 aaKnown RBP8.75□□□□□ -1.01
CAPN3-216ENST00000567071 RNF4P78317 190 aa8.75□□□□□ -1.01
CAPN3-216ENST00000567071 RGS1Q08116 209 aa8.75□□□□□ -1.01
CAPN3-216ENST00000567071 SLC13A2Q13183 592 aa8.75□□□□□ -1.01
CAPN3-216ENST00000567071 FGFBP1Q14512 234 aa8.75□□□□□ -1.01
CAPN3-216ENST00000567071 CHI3L2Q15782 390 aa8.75□□□□□ -1.01
CAPN3-216ENST00000567071 PFKFB4Q16877 469 aa8.75□□□□□ -1.01
CAPN3-216ENST00000567071 MPEG1Q2M385 716 aa8.75□□□□□ -1.01
CAPN3-216ENST00000567071 C18orf21Q32NC0 220 aaPredicted RBP8.75□□□□□ -1.01
CAPN3-216ENST00000567071 ZNF791Q3KP31 576 aaPredicted RBP8.75□□□□□ -1.01
CAPN3-216ENST00000567071 FBLN7Q53RD9 439 aa8.75□□□□□ -1.01
CAPN3-216ENST00000567071 PIGGQ5H8A4 983 aa8.75□□□□□ -1.01
CAPN3-216ENST00000567071 AFAP1L2Q8N4X5 818 aa8.75□□□□□ -1.01
CAPN3-216ENST00000567071 TBC1D19Q8N5T2 526 aa8.75□□□□□ -1.01
CAPN3-216ENST00000567071 PPFIBP2Q8ND30 876 aa8.75□□□□□ -1.01
CAPN3-216ENST00000567071 MORN4Q8NDC4 146 aa8.75□□□□□ -1.01
CAPN3-216ENST00000567071 ESAMQ96AP7 390 aa8.75□□□□□ -1.01
CAPN3-216ENST00000567071 C11orf24Q96F05 449 aaPredicted RBP8.75□□□□□ -1.01
CAPN3-216ENST00000567071 TMEM237Q96Q45 408 aa8.75□□□□□ -1.01
CAPN3-216ENST00000567071 TRIM54Q9BYV2 358 aa8.75□□□□□ -1.01
CAPN3-216ENST00000567071 BHLHE41Q9C0J9 482 aaPredicted RBP8.75□□□□□ -1.01
CAPN3-216ENST00000567071 OR8D2Q9GZM6 311 aa8.75□□□□□ -1.01
CAPN3-216ENST00000567071 PARVBQ9HBI1 364 aa8.75□□□□□ -1.01
CAPN3-216ENST00000567071 OXSMQ9NWU1 459 aa8.75□□□□□ -1.01
CAPN3-216ENST00000567071 WWOXQ9NZC7 414 aa8.75□□□□□ -1.01
CAPN3-216ENST00000567071 CLCF1Q9UBD9 225 aa8.75□□□□□ -1.01
CAPN3-216ENST00000567071 MRPS33Q9Y291 106 aaKnown RBP8.75□□□□□ -1.01
CAPN3-216ENST00000567071 WBP11Q9Y2W2 641 aaKnown RBP8.75□□□□□ -1.01
CAPN3-216ENST00000567071 CCDC189A1A4V9 331 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 BIRC5O15392 142 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 TRIM13O60858 407 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 THBDP07204 575 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 CD3EP07766 207 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 HIST1H2AGP0C0S8 130 aaPredicted RBP8.74□□□□□ -1.01
CAPN3-216ENST00000567071 HIST1H2ADP20671 130 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 SERPINB3P29508 390 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 LIMS1P48059 325 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 GNGT1P63211 74 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 SIRPAP78324 504 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 ASPHQ12797 758 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 GGTLC2Q14390 218 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 SETDB1Q15047 1291 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 RAB35Q15286 201 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 PDK4Q16654 411 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 EIPR1Q53HC9 387 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 LIPMQ5VYY2 423 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 VWA1Q6PCB0 445 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 RPS27LQ71UM5 84 aaKnown RBP8.74□□□□□ -1.01
CAPN3-216ENST00000567071 CHMP1BQ7LBR1 199 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 ADGRE4PQ86SQ3 457 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 PACS2Q86VP3 889 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 SLC15A4Q8N697 577 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 CCNYL1Q8N7R7 359 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 PDPRQ8NCN5 879 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 OR14A16Q8NHC5 309 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 LRRC8CQ8TDW0 803 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms