RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 GRID1Q9ULK0 1009 aa18.39■□□□□ 0.53
CLN6-207ENST00000566347 MAPRE3Q9UPY8 281 aa18.39■□□□□ 0.53
CLN6-207ENST00000566347 WBP11Q9Y2W2 641 aaKnown RBP18.39■□□□□ 0.53
CLN6-207ENST00000566347 CRCPO75575 148 aa18.38■□□□□ 0.53
CLN6-207ENST00000566347 SLITRK5O94991 958 aa18.38■□□□□ 0.53
CLN6-207ENST00000566347 PROCP04070 461 aa18.38■□□□□ 0.53
CLN6-207ENST00000566347 CT45A8P0DMV1 189 aa18.38■□□□□ 0.53
CLN6-207ENST00000566347 CT45A9P0DMV2 189 aa18.38■□□□□ 0.53
CLN6-207ENST00000566347 IL12BP29460 328 aa18.38■□□□□ 0.53
CLN6-207ENST00000566347 NAGLUP54802 743 aa18.38■□□□□ 0.53
CLN6-207ENST00000566347 FOXA1P55317 472 aa18.38■□□□□ 0.53
CLN6-207ENST00000566347 DNAJB13P59910 316 aa18.38■□□□□ 0.53
CLN6-207ENST00000566347 MRPS22P82650 360 aaKnown RBP18.38■□□□□ 0.53
CLN6-207ENST00000566347 RCAN2Q14206 197 aa18.38■□□□□ 0.53
CLN6-207ENST00000566347 CT45A2Q5DJT8 189 aa18.38■□□□□ 0.53
CLN6-207ENST00000566347 FRMD7Q6ZUT3 714 aa18.38■□□□□ 0.53
CLN6-207ENST00000566347 SH2D5Q6ZV89 423 aa18.38■□□□□ 0.53
CLN6-207ENST00000566347 TRIM46Q7Z4K8 759 aa18.38■□□□□ 0.53
CLN6-207ENST00000566347 TDRPQ86YL5 185 aa18.38■□□□□ 0.53
CLN6-207ENST00000566347 WDSUB1Q8N9V3 476 aa18.38■□□□□ 0.53
CLN6-207ENST00000566347 RELL2Q8NC24 303 aaPredicted RBP18.38■□□□□ 0.53
CLN6-207ENST00000566347 NAXEQ8NCW5 288 aa18.38■□□□□ 0.53
CLN6-207ENST00000566347 UBLCP1Q8WVY7 318 aaPredicted RBP18.38■□□□□ 0.53
CLN6-207ENST00000566347 TRIB1Q96RU8 372 aa18.38■□□□□ 0.53
CLN6-207ENST00000566347 OR2B2Q9GZK3 357 aa18.38■□□□□ 0.53
CLN6-207ENST00000566347 ANKRA2Q9H9E1 313 aa18.38■□□□□ 0.53
CLN6-207ENST00000566347 CALHM2Q9HA72 323 aa18.38■□□□□ 0.53
CLN6-207ENST00000566347 FOLH1BQ9HBA9 442 aa18.38■□□□□ 0.53
CLN6-207ENST00000566347 SERHLQ9NQF3 203 aa18.38■□□□□ 0.53
CLN6-207ENST00000566347 MIEF1Q9NQG6 463 aa18.38■□□□□ 0.53
CLN6-207ENST00000566347 FOXD3Q9UJU5 478 aaPredicted RBP18.38■□□□□ 0.53
CLN6-207ENST00000566347 C2orf72A6NCS6 295 aa18.37■□□□□ 0.53
CLN6-207ENST00000566347 MBD3L4A6NDZ8 208 aaPredicted RBP18.37■□□□□ 0.53
CLN6-207ENST00000566347 MBD3L3A6NE82 208 aaPredicted RBP18.37■□□□□ 0.53
CLN6-207ENST00000566347 MBD3L5A6NJ08 208 aaPredicted RBP18.37■□□□□ 0.53
CLN6-207ENST00000566347 MYO1GB0I1T2 1018 aa18.37■□□□□ 0.53
CLN6-207ENST00000566347 TSPAN2O60636 221 aa18.37■□□□□ 0.53
CLN6-207ENST00000566347 PLIN3O60664 434 aa18.37■□□□□ 0.53
CLN6-207ENST00000566347 COQ9O75208 318 aa18.37■□□□□ 0.53
CLN6-207ENST00000566347 UQCRC1P31930 480 aa18.37■□□□□ 0.53
CLN6-207ENST00000566347 CRHR1P34998 444 aa18.37■□□□□ 0.53
CLN6-207ENST00000566347 KIR2DL3P43628 341 aa18.37■□□□□ 0.53
CLN6-207ENST00000566347 CORO7P57737 925 aa18.37■□□□□ 0.53
CLN6-207ENST00000566347 C2orf80Q0P641 193 aa18.37■□□□□ 0.53
CLN6-207ENST00000566347 TESK1Q15569 626 aa18.37■□□□□ 0.53
CLN6-207ENST00000566347 FBXL19-AS1Q494R0 122 aa18.37■□□□□ 0.53
CLN6-207ENST00000566347 DCST1Q5T197 706 aa18.37■□□□□ 0.53
CLN6-207ENST00000566347 ENPP6Q6UWR7 440 aa18.37■□□□□ 0.53
CLN6-207ENST00000566347 LARP4Q71RC2 724 aaKnown RBP eCLIP18.37■□□□□ 0.53
CLN6-207ENST00000566347 PLCZ1Q86YW0 608 aa18.37■□□□□ 0.53
CLN6-207ENST00000566347 OR7G2Q8NG99 324 aa18.37■□□□□ 0.53
CLN6-207ENST00000566347 OR14L1PQ8NHC6 308 aa18.37■□□□□ 0.53
CLN6-207ENST00000566347 MBD3L2Q8NHZ7 208 aaPredicted RBP18.37■□□□□ 0.53
CLN6-207ENST00000566347 CDC26Q8NHZ8 85 aa18.37■□□□□ 0.53
CLN6-207ENST00000566347 ZPLD1Q8TCW7 415 aa18.37■□□□□ 0.53
CLN6-207ENST00000566347 RNASE6Q93091 150 aaKnown RBP18.37■□□□□ 0.53
CLN6-207ENST00000566347 TRIM44Q96DX7 344 aaPredicted RBP18.37■□□□□ 0.53
CLN6-207ENST00000566347 ADOQ96SZ5 270 aa18.37■□□□□ 0.53
CLN6-207ENST00000566347 MYNNQ9NPC7 610 aa18.37■□□□□ 0.53
CLN6-207ENST00000566347 RRAGDQ9NQL2 400 aaPredicted RBP18.37■□□□□ 0.53
CLN6-207ENST00000566347 TAS2R7Q9NYW3 318 aa18.37■□□□□ 0.53
CLN6-207ENST00000566347 WIF1Q9Y5W5 379 aa18.37■□□□□ 0.53
CLN6-207ENST00000566347 HIVEP1P15822 2718 aa18.37■□□□□ 0.53
CLN6-207ENST00000566347 KDM4EB2RXH2 506 aaPredicted RBP18.36■□□□□ 0.53
CLN6-207ENST00000566347 RSL1D1O76021 490 aaKnown RBP18.36■□□□□ 0.53
CLN6-207ENST00000566347 SHBGP04278 402 aa18.36■□□□□ 0.53
CLN6-207ENST00000566347 CYP4B1P13584 511 aa18.36■□□□□ 0.53
CLN6-207ENST00000566347 CPN1P15169 458 aa18.36■□□□□ 0.53
CLN6-207ENST00000566347 PNLIPRP2P54317 469 aa18.36■□□□□ 0.53
CLN6-207ENST00000566347 WNT3P56703 355 aa18.36■□□□□ 0.53
CLN6-207ENST00000566347 FAM71E1Q6IPT2 247 aa18.36■□□□□ 0.53
CLN6-207ENST00000566347 NPSR1Q6W5P4 371 aa18.36■□□□□ 0.53
CLN6-207ENST00000566347 CCDC63Q8NA47 563 aa18.36■□□□□ 0.53
CLN6-207ENST00000566347 METTL2AQ96IZ6 378 aaKnown RBP18.36■□□□□ 0.53
CLN6-207ENST00000566347 SH3GL2Q99962 352 aa18.36■□□□□ 0.53
CLN6-207ENST00000566347 OXSMQ9NWU1 459 aa18.36■□□□□ 0.53
CLN6-207ENST00000566347 OR10H1Q9Y4A9 318 aa18.36■□□□□ 0.53
CLN6-207ENST00000566347 A0A087WV62 115 aa18.35■□□□□ 0.53
CLN6-207ENST00000566347 COPEO14579 308 aa18.35■□□□□ 0.53
CLN6-207ENST00000566347 UROSP10746 265 aa18.35■□□□□ 0.53
CLN6-207ENST00000566347 CPA3P15088 417 aa18.35■□□□□ 0.53
CLN6-207ENST00000566347 CTSSP25774 331 aa18.35■□□□□ 0.53
CLN6-207ENST00000566347 NTSP30990 170 aa18.35■□□□□ 0.53
CLN6-207ENST00000566347 SRD5A2P31213 254 aa18.35■□□□□ 0.53
CLN6-207ENST00000566347 OPRM1P35372 400 aa18.35■□□□□ 0.53
CLN6-207ENST00000566347 SLCO1A2P46721 670 aa18.35■□□□□ 0.53
CLN6-207ENST00000566347 NCBP2P52298 156 aaKnown RBP eCLIP18.35■□□□□ 0.53
CLN6-207ENST00000566347 ZNF136P52737 540 aa18.35■□□□□ 0.53
CLN6-207ENST00000566347 ZNF155Q12901 538 aaPredicted RBP18.35■□□□□ 0.53
CLN6-207ENST00000566347 POMZP3Q6PJE2 187 aa18.35■□□□□ 0.53
CLN6-207ENST00000566347 SPNS3Q6ZMD2 512 aa18.35■□□□□ 0.53
CLN6-207ENST00000566347 IKBIPQ70UQ0 350 aa18.35■□□□□ 0.53
CLN6-207ENST00000566347 IFNEQ86WN2 208 aa18.35■□□□□ 0.53
CLN6-207ENST00000566347 SLC44A2Q8IWA5 706 aaPredicted RBP18.35■□□□□ 0.53
CLN6-207ENST00000566347 ZZZ3Q8IYH5 903 aa18.35■□□□□ 0.53
CLN6-207ENST00000566347 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.35■□□□□ 0.53
CLN6-207ENST00000566347 TAS2R10Q9NYW0 307 aa18.35■□□□□ 0.53
CLN6-207ENST00000566347 MID2Q9UJV3 735 aa18.35■□□□□ 0.53
CLN6-207ENST00000566347 MRPS18CQ9Y3D5 142 aaKnown RBP18.35■□□□□ 0.53
CLN6-207ENST00000566347 MED12Q93074 2177 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms