RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 NDNQ99608 321 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 TMEM109Q9BVC6 243 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 ROGDIQ9GZN7 287 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 DERL2Q9GZP9 239 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 OR10A4Q9H209 315 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 METTL7AQ9H8H3 244 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 ACTR8Q9H981 624 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 NMRAL1Q9HBL8 299 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 PLSCR4Q9NRQ2 329 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 ARGLU1Q9NWB6 273 aaPredicted RBP8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 TAS2R10Q9NYW0 307 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 PSMC3IPQ9P2W1 217 aaPredicted RBP8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 GPR52Q9Y2T5 361 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 ACOT9Q9Y305 439 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 SNX8Q9Y5X2 465 aa8.14□□□□□ -1.11
VPS9D1-205ENST00000565452 RAI1Q7Z5J4 1906 aaPredicted RBP8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 A0A0A6YYJ9 748 aa8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 SLC35F4A4IF30 521 aa8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 SLCO1B7G3V0H7 640 aa8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 HRKO00198 91 aa8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 CLEC3AO75596 197 aa8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 CD8AP01732 235 aa8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 ALDOAP04075 364 aaKnown RBP8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 ZNF708P17019 499 aa8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 ZNF37AP17032 561 aaPredicted RBP8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 TYK2P29597 1187 aa8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 HNRNPH1P31943 449 aaKnown RBP8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 SERPINB8P50452 374 aa8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 CLDN18P56856 261 aa8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 SLC37A1P57057 533 aa8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 IFFO1Q0D2I5 559 aa8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 ZNF267Q14586 743 aaPredicted RBP8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 ZKSCAN8Q15776 578 aaPredicted RBP8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 UAP1Q16222 522 aaPredicted RBP8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 FAM83EQ2M2I3 478 aa8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 PRR31Q5SQ13 230 aa8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 MROH9Q5TGP6 573 aa8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 TMIGD1Q6UXZ0 262 aa8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 STAC2Q6ZMT1 411 aa8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 FAM214BQ7L5A3 538 aa8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 TMPRSS11BQ86T26 416 aa8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 TBC1D1Q86TI0 1168 aaPredicted RBP8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 THOC6Q86W42 341 aaKnown RBP8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 OR4N5Q8IXE1 308 aa8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 GSPT2Q8IYD1 628 aaKnown RBP8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 RDH11Q8TC12 318 aa8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 FAM168AQ92567 244 aa8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 FBXL8Q96CD0 374 aa8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 TRAF4Q9BUZ4 470 aaPredicted RBP8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 OR2B2Q9GZK3 357 aa8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 EML4Q9HC35 981 aaKnown RBP8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 SERHLQ9NQF3 203 aa8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 B3GALT5Q9Y2C3 310 aa8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 MRPS18CQ9Y3D5 142 aaKnown RBP8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 TENM1Q9UKZ4 2725 aa8.13□□□□□ -1.11
VPS9D1-205ENST00000565452 ALPK2Q86TB3 2170 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 ICOSLGO75144 302 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 TNFRSF21O75509 655 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 PIAS1O75925 651 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 WISP3O95389 354 aaPredicted RBP8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 C2P06681 752 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 LTA4HP09960 611 aaKnown RBP8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 CCDC166P0CW27 439 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 C1GALT1C1LP0DN25 315 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 PEPDP12955 493 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 NAGAP17050 411 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 GNAZP19086 355 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 CPN2P22792 545 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 CERS1P27544 350 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 SRP14P37108 136 aaKnown RBP8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 KCNC1P48547 511 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 HERVK_113P63132 956 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 ERVK-8P63133 956 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 ACTG1P63261 375 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 IGLV3-21P80748 117 aaPredicted RBP8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 CDKL1Q00532 357 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 PLIN5Q00G26 463 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 SNTA1Q13424 505 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 ACAP2Q15057 778 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 EBPQ15125 230 aaKnown RBP8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 TSNAXIP1Q2TAA8 658 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 PGGHGQ32M88 737 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 NCMAPQ5T1S8 102 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 AGAP6Q5VW22 663 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 KLC3Q6P597 504 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 BEND4Q6ZU67 534 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 RAPH1Q70E73 1250 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 NUP54Q7Z3B4 507 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 ADAMTSL2Q86TH1 951 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 SPNS2Q8IVW8 549 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 KRT78Q8N1N4 520 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 SRFBP1Q8NEF9 429 aaKnown RBP8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 RHEBL1Q8TAI7 183 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 TANKQ92844 425 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 RIT1Q92963 219 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 SFXN2Q96NB2 322 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 KCNC2Q96PR1 638 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 PELOQ9BRX2 385 aaKnown RBP8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 ERVK-6Q9BXR3 956 aa8.12□□□□□ -1.11
VPS9D1-205ENST00000565452 HDHD5Q9BXW7 423 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms