RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 VMACQ2NL98 169 aa10.31□□□□□ -0.76
SF3B3-205ENST00000564899 SFT2D3Q587I9 215 aa10.31□□□□□ -0.76
SF3B3-205ENST00000564899 FAM69BQ5VUD6 431 aa10.31□□□□□ -0.76
SF3B3-205ENST00000564899 MFSD12Q6NUT3 480 aa10.31□□□□□ -0.76
SF3B3-205ENST00000564899 TMEM205Q6UW68 189 aa10.31□□□□□ -0.76
SF3B3-205ENST00000564899 PTRH1Q86Y79 214 aaKnown RBP10.31□□□□□ -0.76
SF3B3-205ENST00000564899 PTOV1Q86YD1 416 aa10.31□□□□□ -0.76
SF3B3-205ENST00000564899 C11orf65Q8NCR3 313 aa10.31□□□□□ -0.76
SF3B3-205ENST00000564899 OR7G1Q8NGA0 311 aa10.31□□□□□ -0.76
SF3B3-205ENST00000564899 OR5D16Q8NGK9 328 aa10.31□□□□□ -0.76
SF3B3-205ENST00000564899 MIPOL1Q8TD10 442 aa10.31□□□□□ -0.76
SF3B3-205ENST00000564899 WDR60Q8WVS4 1066 aa10.31□□□□□ -0.76
SF3B3-205ENST00000564899 DAZLQ92904 295 aaKnown RBP10.31□□□□□ -0.76
SF3B3-205ENST00000564899 NCLNQ969V3 563 aa10.31□□□□□ -0.76
SF3B3-205ENST00000564899 OTUB1Q96FW1 271 aaPredicted RBP10.31□□□□□ -0.76
SF3B3-205ENST00000564899 C16orf58Q96GQ5 468 aa10.31□□□□□ -0.76
SF3B3-205ENST00000564899 FBXL20Q96IG2 436 aa10.31□□□□□ -0.76
SF3B3-205ENST00000564899 ART5Q96L15 291 aa10.31□□□□□ -0.76
SF3B3-205ENST00000564899 OR7D2Q96RA2 312 aa10.31□□□□□ -0.76
SF3B3-205ENST00000564899 CCNL2Q96S94 520 aaPredicted RBP10.31□□□□□ -0.76
SF3B3-205ENST00000564899 ACTRT3Q9BYD9 372 aa10.31□□□□□ -0.76
SF3B3-205ENST00000564899 TRIM15Q9C019 465 aa10.31□□□□□ -0.76
SF3B3-205ENST00000564899 OR8D2Q9GZM6 311 aa10.31□□□□□ -0.76
SF3B3-205ENST00000564899 MUC13Q9H3R2 512 aa10.31□□□□□ -0.76
SF3B3-205ENST00000564899 THUMPD1Q9NXG2 353 aaKnown RBP10.31□□□□□ -0.76
SF3B3-205ENST00000564899 NUP210LQ5VU65 1888 aa10.31□□□□□ -0.76
SF3B3-205ENST00000564899 IGHV3-20A0A0C4DH32 117 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 SAGE2PA6NJ88 616 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 C21orf140B9A014 251 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 HMGN4O00479 90 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 ACOT8O14734 319 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 ARPC2O15144 300 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 ASNA1O43681 348 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 GMNNO75496 209 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 DDAH2O95865 285 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 IGHEP01854 428 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 ARAFP10398 606 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 ACP2P11117 423 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 NCK1P16333 377 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 GGT1P19440 569 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 STAT5AP42229 794 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 MAN2A2P49641 1150 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 EEF1A2Q05639 463 aaKnown RBP10.3□□□□□ -0.76
SF3B3-205ENST00000564899 RBBP4Q09028 425 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 DNASE1L3Q13609 305 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 SCARB2Q14108 478 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 ADRM1Q16186 407 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 ZNF630Q2M218 657 aaPredicted RBP10.3□□□□□ -0.76
SF3B3-205ENST00000564899 CDC73Q6P1J9 531 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 ZCCHC12Q6PEW1 402 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 PAPD4Q6PIY7 484 aaKnown RBP10.3□□□□□ -0.76
SF3B3-205ENST00000564899 CPEB2Q7Z5Q1 589 aaKnown RBP10.3□□□□□ -0.76
SF3B3-205ENST00000564899 WDR53Q7Z5U6 358 aaPredicted RBP10.3□□□□□ -0.76
SF3B3-205ENST00000564899 VASH2Q86V25 355 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 DHFR2Q86XF0 187 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 LGI4Q8N135 537 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 CDRT4Q8N9R6 151 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 MORN4Q8NDC4 146 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 BHLHE22Q8NFJ8 381 aaPredicted RBP10.3□□□□□ -0.76
SF3B3-205ENST00000564899 SLC2A12Q8TD20 617 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 ADAMTS15Q8TE58 950 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 FIG4Q92562 907 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 SLC9A6Q92581 669 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 RAB8BQ92930 207 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 MAL2Q969L2 176 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 SENP5Q96HI0 755 aaPredicted RBP10.3□□□□□ -0.76
SF3B3-205ENST00000564899 LRGUKQ96M69 825 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 OR10A5Q9H207 317 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 DENND2DQ9H6A0 471 aaPredicted RBP10.3□□□□□ -0.76
SF3B3-205ENST00000564899 TMEM38AQ9H6F2 299 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 FOLH1BQ9HBA9 442 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 A4GALTQ9NPC4 353 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 ACTR3BQ9P1U1 418 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 P2RX2Q9UBL9 471 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 COPS7AQ9UBW8 275 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 PRODH2Q9UF12 536 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 TCFL5Q9UL49 500 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 FARSAQ9Y285 508 aaKnown RBP10.3□□□□□ -0.76
SF3B3-205ENST00000564899 CSMD1Q96PZ7 3565 aa10.3□□□□□ -0.76
SF3B3-205ENST00000564899 CROCCQ5TZA2 2017 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 TMEM247A6NEH6 219 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.29□□□□□ -0.76
SF3B3-205ENST00000564899 C5orf58C9J3I9 102 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 CXCR6O00574 342 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 PCDH17O14917 1159 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 AGR2O95994 175 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 CLPSP04118 112 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 IGKV3-11P04433 115 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 ALOX5P09917 674 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 ATP6V1B2P21281 511 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 DLSTP36957 453 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 EMDP50402 254 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 ERFP50548 548 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 POLE2P56282 527 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 ACTR3P61158 418 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 RPS18P62269 152 aaKnown RBP10.29□□□□□ -0.76
SF3B3-205ENST00000564899 ELF3P78545 371 aaPredicted RBP10.29□□□□□ -0.76
SF3B3-205ENST00000564899 CDK6Q00534 326 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 TLE1Q04724 770 aa10.29□□□□□ -0.76
SF3B3-205ENST00000564899 VEZF1Q14119 521 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms