RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 COA4Q9NYJ1 87 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 RBPJLQ9UBG7 517 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 ING1Q9UK53 422 aaPredicted RBP11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 FBXW2Q9UKT8 454 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 ARHGEF33A8MVX0 844 aa11.65□□□□□ -0.55
SCAMP2-204ENST00000563829 RP2O75695 350 aa11.65□□□□□ -0.55
SCAMP2-204ENST00000563829 MMP3P08254 477 aa11.65□□□□□ -0.55
SCAMP2-204ENST00000563829 JUPP14923 745 aa11.65□□□□□ -0.55
SCAMP2-204ENST00000563829 CR2P20023 1033 aa11.65□□□□□ -0.55
SCAMP2-204ENST00000563829 RAB3BP20337 219 aa11.65□□□□□ -0.55
SCAMP2-204ENST00000563829 RFX3P48380 749 aa11.65□□□□□ -0.55
SCAMP2-204ENST00000563829 RPS24P62847 133 aaKnown RBP11.65□□□□□ -0.55
SCAMP2-204ENST00000563829 NFATC2Q13469 925 aa11.65□□□□□ -0.55
SCAMP2-204ENST00000563829 HTR4Q13639 388 aa11.65□□□□□ -0.55
SCAMP2-204ENST00000563829 HLXQ14774 488 aaPredicted RBP11.65□□□□□ -0.55
SCAMP2-204ENST00000563829 KCNA10Q16322 511 aa11.65□□□□□ -0.55
SCAMP2-204ENST00000563829 BTN2A1Q7KYR7 527 aa11.65□□□□□ -0.55
SCAMP2-204ENST00000563829 OXR1Q8N573 874 aa11.65□□□□□ -0.55
SCAMP2-204ENST00000563829 OR56B4Q8NH76 319 aa11.65□□□□□ -0.55
SCAMP2-204ENST00000563829 TRMT10AQ8TBZ6 339 aaKnown RBP11.65□□□□□ -0.55
SCAMP2-204ENST00000563829 SCARB1Q8WTV0 552 aa11.65□□□□□ -0.55
SCAMP2-204ENST00000563829 EGLN3Q9H6Z9 239 aa11.65□□□□□ -0.55
SCAMP2-204ENST00000563829 DNAJC11Q9NVH1 559 aa11.65□□□□□ -0.55
SCAMP2-204ENST00000563829 TEX10Q9NXF1 929 aaPredicted RBP11.65□□□□□ -0.55
SCAMP2-204ENST00000563829 KCND3Q9UK17 655 aa11.65□□□□□ -0.55
SCAMP2-204ENST00000563829 MRTO4Q9UKD2 239 aaKnown RBP11.65□□□□□ -0.55
SCAMP2-204ENST00000563829 CHST2Q9Y4C5 530 aa11.65□□□□□ -0.55
SCAMP2-204ENST00000563829 PLSCR5A0PG75 271 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 MTMR11A4FU01 709 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 ARL5CA6NH57 179 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 RRN3P2A6NIE6 340 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 C5orf58C9J3I9 102 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 D6RAR5 112 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 FAAHO00519 579 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 PRODHO43272 600 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 SGTAO43765 313 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 OR5F1O95221 314 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 BCHEP06276 602 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 RAE1P78406 368 aaKnown RBP11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 CDC42EP1Q00587 391 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 UPP1Q16831 310 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 ZNF630Q2M218 657 aaPredicted RBP11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 HBMQ6B0K9 141 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 OR5M10Q6IEU7 315 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 PYHIN1Q6K0P9 492 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 TNFAIP8L2Q6P589 184 aaPredicted RBP11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 ZNF613Q6PF04 617 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 RELL2Q8NC24 303 aaPredicted RBP11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 OR1S1Q8NH92 325 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 PLA2G12AQ9BZM1 189 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 MED9Q9NWA0 146 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 EXOSC1Q9Y3B2 195 aaKnown RBP11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 PLXNB2O15031 1838 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 PLXNA4Q9HCM2 1894 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 OR6C75A6NL08 312 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 FAM170BA6NMN3 283 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 F5H5T6 163 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 SAP18O00422 153 aaKnown RBP11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 PEX14O75381 377 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 ATG12O94817 140 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 TACR2P21452 398 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 PSMA3P25788 255 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 OC90Q02509 493 aaPredicted RBP11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 EEF1A2Q05639 463 aaKnown RBP11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 LGALS3BPQ08380 585 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 PABPC1L2AQ5JQF8 200 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 PRAMEF19Q5SWL8 479 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 ARMC12Q5T9G4 340 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 SLC25A25Q6KCM7 469 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 HMGN2P46Q86SG4 172 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 IZUMO1Q8IYV9 350 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 GPC2Q8N158 579 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 OR6J1Q8NGC5 347 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 NKX6-2Q9C056 277 aaPredicted RBP11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 TMEM38AQ9H6F2 299 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 SYNDIG1Q9H7V2 258 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 NANSQ9NR45 359 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 GULP1Q9UBP9 304 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 ST3GAL5Q9UNP4 418 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 PTPRDP23468 1912 aa11.64□□□□□ -0.55
SCAMP2-204ENST00000563829 MCRIP1C9JLW8 97 aa11.63□□□□□ -0.55
SCAMP2-204ENST00000563829 RNASET2O00584 256 aaKnown RBP11.63□□□□□ -0.55
SCAMP2-204ENST00000563829 SPDEFO95238 335 aa11.63□□□□□ -0.55
SCAMP2-204ENST00000563829 EGFP01133 1207 aa11.63□□□□□ -0.55
SCAMP2-204ENST00000563829 MMP11P24347 488 aa11.63□□□□□ -0.55
SCAMP2-204ENST00000563829 ASMTP46597 345 aa11.63□□□□□ -0.55
SCAMP2-204ENST00000563829 ZNF280AP59817 542 aaPredicted RBP11.63□□□□□ -0.55
SCAMP2-204ENST00000563829 MC2RQ01718 297 aa11.63□□□□□ -0.55
SCAMP2-204ENST00000563829 FGL1Q08830 312 aa11.63□□□□□ -0.55
SCAMP2-204ENST00000563829 MAP4K2Q12851 820 aa11.63□□□□□ -0.55
SCAMP2-204ENST00000563829 TMPRSS9Q7Z410 1059 aa11.63□□□□□ -0.55
SCAMP2-204ENST00000563829 ZER1Q7Z7L7 766 aa11.63□□□□□ -0.55
SCAMP2-204ENST00000563829 IQCHQ86VS3 1027 aa11.63□□□□□ -0.55
SCAMP2-204ENST00000563829 THEM5Q8N1Q8 247 aa11.63□□□□□ -0.55
SCAMP2-204ENST00000563829 BOLLQ8N9W6 283 aaKnown RBP11.63□□□□□ -0.55
SCAMP2-204ENST00000563829 FBXO15Q8NCQ5 510 aaPredicted RBP11.63□□□□□ -0.55
SCAMP2-204ENST00000563829 OR5T2Q8NGG2 359 aa11.63□□□□□ -0.55
SCAMP2-204ENST00000563829 GPA33Q99795 319 aa11.63□□□□□ -0.55
SCAMP2-204ENST00000563829 GSDMCQ9BYG8 508 aa11.63□□□□□ -0.55
SCAMP2-204ENST00000563829 WDR26Q9H7D7 661 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms