RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 SPATA4Q8NEY3 305 aa16.9■□□□□ 0.3
NME3-204ENST00000563498 ADCY4Q8NFM4 1077 aa16.9■□□□□ 0.3
NME3-204ENST00000563498 RNF138Q8WVD3 245 aa16.9■□□□□ 0.3
NME3-204ENST00000563498 TMBIM1Q969X1 311 aa16.9■□□□□ 0.3
NME3-204ENST00000563498 TM4SF18Q96CE8 201 aa16.9■□□□□ 0.3
NME3-204ENST00000563498 KLHL29Q96CT2 875 aa16.9■□□□□ 0.3
NME3-204ENST00000563498 ERP27Q96DN0 273 aa16.9■□□□□ 0.3
NME3-204ENST00000563498 Q96MF0 132 aa16.9■□□□□ 0.3
NME3-204ENST00000563498 ZNF681Q96N22 645 aa16.9■□□□□ 0.3
NME3-204ENST00000563498 BTBD9Q96Q07 612 aa16.9■□□□□ 0.3
NME3-204ENST00000563498 ELOVL6Q9H5J4 265 aa16.9■□□□□ 0.3
NME3-204ENST00000563498 KLHL28Q9NXS3 571 aa16.9■□□□□ 0.3
NME3-204ENST00000563498 PCTPQ9UKL6 214 aa16.9■□□□□ 0.3
NME3-204ENST00000563498 REM1O75628 298 aa16.89■□□□□ 0.29
NME3-204ENST00000563498 BCAS2O75934 225 aaPredicted RBP16.89■□□□□ 0.29
NME3-204ENST00000563498 TYK2P29597 1187 aa16.89■□□□□ 0.29
NME3-204ENST00000563498 SERPINB8P50452 374 aa16.89■□□□□ 0.29
NME3-204ENST00000563498 TRA2BP62995 288 aaKnown RBP16.89■□□□□ 0.29
NME3-204ENST00000563498 DUSP2Q05923 314 aa16.89■□□□□ 0.29
NME3-204ENST00000563498 GALNT1Q10472 559 aaPredicted RBP16.89■□□□□ 0.29
NME3-204ENST00000563498 EFR3AQ14156 821 aa16.89■□□□□ 0.29
NME3-204ENST00000563498 C20orf204Q6ZNR8 217 aa16.89■□□□□ 0.29
NME3-204ENST00000563498 P4HA3Q7Z4N8 544 aa16.89■□□□□ 0.29
NME3-204ENST00000563498 YTHDF3Q7Z739 585 aaKnown RBP16.89■□□□□ 0.29
NME3-204ENST00000563498 FBXO25Q8TCJ0 367 aa16.89■□□□□ 0.29
NME3-204ENST00000563498 ZNF675Q8TD23 568 aa16.89■□□□□ 0.29
NME3-204ENST00000563498 CNRIP1Q96F85 164 aaPredicted RBP16.89■□□□□ 0.29
NME3-204ENST00000563498 CCL19Q99731 98 aa16.89■□□□□ 0.29
NME3-204ENST00000563498 MED18Q9BUE0 208 aa16.89■□□□□ 0.29
NME3-204ENST00000563498 FAIM2Q9BWQ8 316 aa16.89■□□□□ 0.29
NME3-204ENST00000563498 BRF2Q9HAW0 419 aa16.89■□□□□ 0.29
NME3-204ENST00000563498 ZBTB26Q9HCK0 441 aa16.89■□□□□ 0.29
NME3-204ENST00000563498 ELOVL5Q9NYP7 299 aa16.89■□□□□ 0.29
NME3-204ENST00000563498 DKKL1Q9UK85 242 aa16.89■□□□□ 0.29
NME3-204ENST00000563498 SLC12A4Q9UP95 1085 aa16.89■□□□□ 0.29
NME3-204ENST00000563498 UTP11Q9Y3A2 253 aaKnown RBP16.89■□□□□ 0.29
NME3-204ENST00000563498 ZNF780BQ9Y6R6 833 aa16.89■□□□□ 0.29
NME3-204ENST00000563498 ARID1AO14497 2285 aa16.88■□□□□ 0.29
NME3-204ENST00000563498 SLC22A20A6NK97 555 aa16.88■□□□□ 0.29
NME3-204ENST00000563498 ZIC3O60481 467 aa16.88■□□□□ 0.29
NME3-204ENST00000563498 TSPAN2O60636 221 aa16.88■□□□□ 0.29
NME3-204ENST00000563498 SMNDC1O75940 238 aaKnown RBP eCLIP16.88■□□□□ 0.29
NME3-204ENST00000563498 ALDOAP04075 364 aaKnown RBP16.88■□□□□ 0.29
NME3-204ENST00000563498 RBP1P09455 135 aa16.88■□□□□ 0.29
NME3-204ENST00000563498 CT45A8P0DMV1 189 aa16.88■□□□□ 0.29
NME3-204ENST00000563498 CT45A9P0DMV2 189 aa16.88■□□□□ 0.29
NME3-204ENST00000563498 PCSK2P16519 638 aa16.88■□□□□ 0.29
NME3-204ENST00000563498 DPP4P27487 766 aa16.88■□□□□ 0.29
NME3-204ENST00000563498 UGT2B10P36537 528 aa16.88■□□□□ 0.29
NME3-204ENST00000563498 MRPS35P82673 323 aaKnown RBP16.88■□□□□ 0.29
NME3-204ENST00000563498 CT45A2Q5DJT8 189 aa16.88■□□□□ 0.29
NME3-204ENST00000563498 ZNF474Q6S9Z5 364 aaPredicted RBP16.88■□□□□ 0.29
NME3-204ENST00000563498 CHMP1BQ7LBR1 199 aa16.88■□□□□ 0.29
NME3-204ENST00000563498 PIK3IP1Q96FE7 263 aa16.88■□□□□ 0.29
NME3-204ENST00000563498 PGM2Q96G03 612 aa16.88■□□□□ 0.29
NME3-204ENST00000563498 FAM111AQ96PZ2 611 aa16.88■□□□□ 0.29
NME3-204ENST00000563498 ADOQ96SZ5 270 aa16.88■□□□□ 0.29
NME3-204ENST00000563498 SLC39A3Q9BRY0 314 aa16.88■□□□□ 0.29
NME3-204ENST00000563498 KIAA1324LA8MWY0 1029 aaPredicted RBP16.87■□□□□ 0.29
NME3-204ENST00000563498 PEPDP12955 493 aa16.87■□□□□ 0.29
NME3-204ENST00000563498 GRK2P25098 689 aa16.87■□□□□ 0.29
NME3-204ENST00000563498 PNLIPRP2P54317 469 aa16.87■□□□□ 0.29
NME3-204ENST00000563498 GAS1P54826 345 aa16.87■□□□□ 0.29
NME3-204ENST00000563498 DSCR4P56555 118 aaPredicted RBP16.87■□□□□ 0.29
NME3-204ENST00000563498 B3GALT5-AS1P59052 145 aa16.87■□□□□ 0.29
NME3-204ENST00000563498 FGFBP1Q14512 234 aa16.87■□□□□ 0.29
NME3-204ENST00000563498 LTB4RQ15722 352 aa16.87■□□□□ 0.29
NME3-204ENST00000563498 ZNF628Q5EBL2 1059 aa16.87■□□□□ 0.29
NME3-204ENST00000563498 SGO1Q5FBB7 561 aa16.87■□□□□ 0.29
NME3-204ENST00000563498 VWA1Q6PCB0 445 aa16.87■□□□□ 0.29
NME3-204ENST00000563498 ZDHHC24Q6UX98 284 aa16.87■□□□□ 0.29
NME3-204ENST00000563498 BTLAQ7Z6A9 289 aa16.87■□□□□ 0.29
NME3-204ENST00000563498 MILR1Q7Z6M3 343 aa16.87■□□□□ 0.29
NME3-204ENST00000563498 CNEP1R1Q8N9A8 125 aa16.87■□□□□ 0.29
NME3-204ENST00000563498 OR4F6Q8NGB9 312 aa16.87■□□□□ 0.29
NME3-204ENST00000563498 PHF21BQ96EK2 531 aa16.87■□□□□ 0.29
NME3-204ENST00000563498 MARK4Q96L34 752 aa16.87■□□□□ 0.29
NME3-204ENST00000563498 NSUN5Q96P11 429 aaKnown RBP16.87■□□□□ 0.29
NME3-204ENST00000563498 MDFIQ99750 246 aa16.87■□□□□ 0.29
NME3-204ENST00000563498 RAB17Q9H0T7 212 aa16.87■□□□□ 0.29
NME3-204ENST00000563498 UBTD1Q9HAC8 227 aa16.87■□□□□ 0.29
NME3-204ENST00000563498 NMRK1Q9NWW6 199 aa16.87■□□□□ 0.29
NME3-204ENST00000563498 EMC8O43402 210 aa16.86■□□□□ 0.29
NME3-204ENST00000563498 POU2F1P14859 743 aa16.86■□□□□ 0.29
NME3-204ENST00000563498 PCSK6P29122 969 aa16.86■□□□□ 0.29
NME3-204ENST00000563498 CCKARP32238 428 aa16.86■□□□□ 0.29
NME3-204ENST00000563498 KRT20P35900 424 aa16.86■□□□□ 0.29
NME3-204ENST00000563498 KIR2DL2P43627 348 aaPredicted RBP16.86■□□□□ 0.29
NME3-204ENST00000563498 EEFSECP57772 596 aaKnown RBP16.86■□□□□ 0.29
NME3-204ENST00000563498 MRPS22P82650 360 aaKnown RBP16.86■□□□□ 0.29
NME3-204ENST00000563498 OR5M10Q6IEU7 315 aa16.86■□□□□ 0.29
NME3-204ENST00000563498 LARP4Q71RC2 724 aaKnown RBP eCLIP16.86■□□□□ 0.29
NME3-204ENST00000563498 PLD6Q8N2A8 252 aaKnown RBP16.86■□□□□ 0.29
NME3-204ENST00000563498 MEIOBQ8N635 442 aa16.86■□□□□ 0.29
NME3-204ENST00000563498 PPP1R14CQ8TAE6 165 aa16.86■□□□□ 0.29
NME3-204ENST00000563498 SELENOMQ8WWX9 145 aa16.86■□□□□ 0.29
NME3-204ENST00000563498 MRRFQ96E11 262 aaKnown RBP16.86■□□□□ 0.29
NME3-204ENST00000563498 VSTM2LQ96N03 204 aa16.86■□□□□ 0.29
NME3-204ENST00000563498 GSX2Q9BZM3 304 aa16.86■□□□□ 0.29
NME3-204ENST00000563498 VPS11Q9H270 941 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms