RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 SLC12A4Q9UP95 1085 aa4.8□□□□□ -1.64
CNOT1-205ENST00000563283 FARSAQ9Y285 508 aaKnown RBP4.8□□□□□ -1.64
CNOT1-205ENST00000563283 PTGDR2Q9Y5Y4 395 aa4.8□□□□□ -1.64
CNOT1-205ENST00000563283 AP1M2Q9Y6Q5 423 aa4.8□□□□□ -1.64
CNOT1-205ENST00000563283 RELNP78509 3460 aa4.8□□□□□ -1.64
CNOT1-205ENST00000563283 HELZ2Q9BYK8 2649 aaKnown RBP4.8□□□□□ -1.64
CNOT1-205ENST00000563283 SCN3AQ9NY46 2000 aa4.8□□□□□ -1.64
CNOT1-205ENST00000563283 TNRC6AQ8NDV7 1962 aaKnown RBP4.8□□□□□ -1.64
CNOT1-205ENST00000563283 NUP210LQ5VU65 1888 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 ZNF462Q96JM2 2506 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 ATP6AP2A0A1C7CYW4 349 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 HYKKA2RU49 373 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 LRIT2A6NDA9 550 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 OR2W5A6NFC9 320 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 ZNF860A6NHJ4 632 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 LRRC3CA6NJW4 275 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 VSTM2BA6NLU5 285 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 FOXE1O00358 373 aaPredicted RBP4.79□□□□□ -1.64
CNOT1-205ENST00000563283 RTCAO00442 366 aaKnown RBP4.79□□□□□ -1.64
CNOT1-205ENST00000563283 TXNDC9O14530 226 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 DSCR3O14972 297 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 ERI3O43414 337 aaKnown RBP4.79□□□□□ -1.64
CNOT1-205ENST00000563283 SRPX2O60687 465 aaPredicted RBP4.79□□□□□ -1.64
CNOT1-205ENST00000563283 EDF1O60869 148 aaKnown RBP4.79□□□□□ -1.64
CNOT1-205ENST00000563283 DIAPH2O60879 1101 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 RBMXL2O75526 392 aaKnown RBP4.79□□□□□ -1.64
CNOT1-205ENST00000563283 CREG1O75629 220 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 ATP6AP2O75787 350 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 ETHE1O95571 254 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 SERPINA6P08185 405 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 FGF4P08620 206 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 SMIM10L1P0DMW3 83 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 PRKAR1AP10644 381 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 IL1RNP18510 177 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 GSTM2P28161 218 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 PTPN4P29074 926 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 HNRNPH1P31943 449 aaKnown RBP4.79□□□□□ -1.64
CNOT1-205ENST00000563283 SSR2P43308 183 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 OR1D4P47884 311 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 PLA2G16P53816 162 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 RAB8AP61006 207 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 STXBP1P61764 594 aaKnown RBP4.79□□□□□ -1.64
CNOT1-205ENST00000563283 HMGCS1Q01581 520 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 BTKQ06187 659 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 TGM3Q08188 693 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 CSTF3Q12996 717 aaKnown RBP4.79□□□□□ -1.64
CNOT1-205ENST00000563283 DNASE1L3Q13609 305 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 LY6DQ14210 128 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 ERV3-1Q14264 604 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 ODF1Q14990 250 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 NDUFA9Q16795 377 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 SYT16Q17RD7 645 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 UGT3A2Q3SY77 523 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 GALNTL6Q49A17 601 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 DEFB134Q4QY38 66 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 TMEM35AQ53FP2 167 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 C10orf62Q5T681 223 aaPredicted RBP4.79□□□□□ -1.64
CNOT1-205ENST00000563283 KHDRBS2Q5VWX1 349 aaKnown RBP4.79□□□□□ -1.64
CNOT1-205ENST00000563283 CYB5D1Q6P9G0 228 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 ABHD13Q7L211 337 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 LRRC34Q8IZ02 419 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 KIRREL3Q8IZU9 778 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 ENDOVQ8N8Q3 282 aaKnown RBP4.79□□□□□ -1.64
CNOT1-205ENST00000563283 GBP7Q8N8V2 638 aaPredicted RBP4.79□□□□□ -1.64
CNOT1-205ENST00000563283 AMER3Q8N944 861 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 NT5CQ8TCD5 201 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 CREB3L4Q8TEY5 395 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 STARD8Q92502 1023 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 MR1Q95460 341 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 C19orf60Q96EN9 201 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 CMTM7Q96FZ5 175 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 SMIM10Q96HG1 83 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 FAR2Q96K12 515 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 TRIB1Q96RU8 372 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 SERPINI1Q99574 410 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 VRK1Q99986 396 aaPredicted RBP4.79□□□□□ -1.64
CNOT1-205ENST00000563283 C17orf62Q9BQA9 187 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 CENPKQ9BS16 269 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 SARGQ9BW04 601 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 SORBS1Q9BX66 1292 aaKnown RBP4.79□□□□□ -1.64
CNOT1-205ENST00000563283 MS4A8Q9BY19 250 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 MRPL1Q9BYD6 325 aaKnown RBP4.79□□□□□ -1.64
CNOT1-205ENST00000563283 NUF2Q9BZD4 464 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 ACPTQ9BZG2 426 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 TUBB1Q9H4B7 451 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 KLHL31Q9H511 634 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 RABEP2Q9H5N1 569 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 CCDC134Q9H6E4 229 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 COPS7BQ9H9Q2 264 aaPredicted RBP4.79□□□□□ -1.64
CNOT1-205ENST00000563283 GPN2Q9H9Y4 310 aaPredicted RBP4.79□□□□□ -1.64
CNOT1-205ENST00000563283 PFDN4Q9NQP4 134 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 CUTCQ9NTM9 273 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 TXLNGQ9NUQ3 528 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 NMRK1Q9NWW6 199 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 ASB6Q9NWX5 421 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 CTSFQ9UBX1 484 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 HAO1Q9UJM8 370 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 DNAJC15Q9Y5T4 150 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 SCN2AQ99250 2005 aa4.79□□□□□ -1.64
CNOT1-205ENST00000563283 IGLV3-12A0A075B6K2 115 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms