RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 SHEQ5VZ18 495 aa11.78□□□□□ -0.52
SF3B3-202ENST00000562722 C8orf74Q6P047 294 aa11.78□□□□□ -0.52
SF3B3-202ENST00000562722 LETMD1Q6P1Q0 360 aa11.78□□□□□ -0.52
SF3B3-202ENST00000562722 LARP4Q71RC2 724 aaKnown RBP eCLIP11.78□□□□□ -0.52
SF3B3-202ENST00000562722 UBQLNLQ8IYU4 475 aa11.78□□□□□ -0.52
SF3B3-202ENST00000562722 CCDC116Q8IYX3 515 aa11.78□□□□□ -0.52
SF3B3-202ENST00000562722 CNEP1R1Q8N9A8 125 aa11.78□□□□□ -0.52
SF3B3-202ENST00000562722 OR4K17Q8NGC6 315 aa11.78□□□□□ -0.52
SF3B3-202ENST00000562722 SMPDL3BQ92485 455 aa11.78□□□□□ -0.52
SF3B3-202ENST00000562722 KAT2AQ92830 837 aa11.78□□□□□ -0.52
SF3B3-202ENST00000562722 NTNG2Q96CW9 530 aa11.78□□□□□ -0.52
SF3B3-202ENST00000562722 CNRIP1Q96F85 164 aaPredicted RBP11.78□□□□□ -0.52
SF3B3-202ENST00000562722 FAM111AQ96PZ2 611 aa11.78□□□□□ -0.52
SF3B3-202ENST00000562722 BRF2Q9HAW0 419 aa11.78□□□□□ -0.52
SF3B3-202ENST00000562722 GIMAP4Q9NUV9 329 aa11.78□□□□□ -0.52
SF3B3-202ENST00000562722 CLCF1Q9UBD9 225 aa11.78□□□□□ -0.52
SF3B3-202ENST00000562722 GPR55Q9Y2T6 319 aaPredicted RBP11.78□□□□□ -0.52
SF3B3-202ENST00000562722 A0A1B0GTL3 188 aa11.77□□□□□ -0.53
SF3B3-202ENST00000562722 A0A1W2PNV4 684 aa11.77□□□□□ -0.53
SF3B3-202ENST00000562722 GNG14A0A1W2PPG7 69 aa11.77□□□□□ -0.53
SF3B3-202ENST00000562722 A8MXE2 369 aa11.77□□□□□ -0.53
SF3B3-202ENST00000562722 PPP6CO00743 305 aa11.77□□□□□ -0.53
SF3B3-202ENST00000562722 TO15178 435 aa11.77□□□□□ -0.53
SF3B3-202ENST00000562722 SMPD2O60906 423 aa11.77□□□□□ -0.53
SF3B3-202ENST00000562722 NME6O75414 186 aaPredicted RBP11.77□□□□□ -0.53
SF3B3-202ENST00000562722 IL3P08700 152 aa11.77□□□□□ -0.53
SF3B3-202ENST00000562722 RPS17P08708 135 aaKnown RBP11.77□□□□□ -0.53
SF3B3-202ENST00000562722 DPP4P27487 766 aa11.77□□□□□ -0.53
SF3B3-202ENST00000562722 LHX2P50458 406 aa11.77□□□□□ -0.53
SF3B3-202ENST00000562722 CORO7P57737 925 aa11.77□□□□□ -0.53
SF3B3-202ENST00000562722 TRA2BP62995 288 aaKnown RBP11.77□□□□□ -0.53
SF3B3-202ENST00000562722 ZNF628Q5EBL2 1059 aa11.77□□□□□ -0.53
SF3B3-202ENST00000562722 Q5PR19 223 aa11.77□□□□□ -0.53
SF3B3-202ENST00000562722 UBAP2Q5T6F2 1119 aaKnown RBP11.77□□□□□ -0.53
SF3B3-202ENST00000562722 FAM219BQ5XKK7 198 aa11.77□□□□□ -0.53
SF3B3-202ENST00000562722 ADGRE4PQ86SQ3 457 aa11.77□□□□□ -0.53
SF3B3-202ENST00000562722 OR9A2Q8NGT5 310 aa11.77□□□□□ -0.53
SF3B3-202ENST00000562722 ZNF483Q8TF39 744 aaPredicted RBP11.77□□□□□ -0.53
SF3B3-202ENST00000562722 EXOSC8Q96B26 276 aaKnown RBP11.77□□□□□ -0.53
SF3B3-202ENST00000562722 EFHD2Q96C19 240 aaPredicted RBP11.77□□□□□ -0.53
SF3B3-202ENST00000562722 CTHRC1Q96CG8 243 aa11.77□□□□□ -0.53
SF3B3-202ENST00000562722 UCN2Q96RP3 112 aa11.77□□□□□ -0.53
SF3B3-202ENST00000562722 MRPL57Q9BQC6 102 aaKnown RBP11.77□□□□□ -0.53
SF3B3-202ENST00000562722 LRRC1Q9BTT6 524 aa11.77□□□□□ -0.53
SF3B3-202ENST00000562722 G6PC3Q9BUM1 346 aa11.77□□□□□ -0.53
SF3B3-202ENST00000562722 MRPL46Q9H2W6 279 aaKnown RBP11.77□□□□□ -0.53
SF3B3-202ENST00000562722 ANKRA2Q9H9E1 313 aa11.77□□□□□ -0.53
SF3B3-202ENST00000562722 ZDHHC18Q9NUE0 388 aa11.77□□□□□ -0.53
SF3B3-202ENST00000562722 KLHL28Q9NXS3 571 aa11.77□□□□□ -0.53
SF3B3-202ENST00000562722 C6orf203Q9P0P8 240 aaPredicted RBP11.77□□□□□ -0.53
SF3B3-202ENST00000562722 VPS29Q9UBQ0 182 aa11.77□□□□□ -0.53
SF3B3-202ENST00000562722 TRPS1Q9UHF7 1281 aa11.77□□□□□ -0.53
SF3B3-202ENST00000562722 DLGAP4Q9Y2H0 992 aa11.77□□□□□ -0.53
SF3B3-202ENST00000562722 OR10H1Q9Y4A9 318 aa11.77□□□□□ -0.53
SF3B3-202ENST00000562722 TESMINQ9Y4I5 508 aa11.77□□□□□ -0.53
SF3B3-202ENST00000562722 EXPH5Q8NEV8 1989 aa11.77□□□□□ -0.53
SF3B3-202ENST00000562722 NAV3Q8IVL0 2385 aa11.77□□□□□ -0.53
SF3B3-202ENST00000562722 HRNRQ86YZ3 2850 aaPredicted RBP11.77□□□□□ -0.53
SF3B3-202ENST00000562722 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 A0A1W2PPR1 153 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 SLC22A20A6NK97 555 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 A8MT66 165 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 POC1B-GALNT4F8VUJ3 575 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 MSTNO14793 375 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 SCO2O43819 266 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 PCDH7O60245 1069 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 TNFSF13O75888 250 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 OR4F21O95013 312 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 TGM6O95932 706 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 KRT6AP02538 564 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 KRT6BP04259 564 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 COL6A2P12110 1019 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 ZNF708P17019 499 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 GRK2P25098 689 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 KRT6CP48668 564 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 SERPINB9P50453 376 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 CLDN18P56856 261 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 SIRPAP78324 504 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 MRPS22P82650 360 aaKnown RBP11.76□□□□□ -0.53
SF3B3-202ENST00000562722 CKAP4Q07065 602 aaKnown RBP11.76□□□□□ -0.53
SF3B3-202ENST00000562722 ZNF155Q12901 538 aaPredicted RBP11.76□□□□□ -0.53
SF3B3-202ENST00000562722 TCHHL1Q5QJ38 904 aaPredicted RBP11.76□□□□□ -0.53
SF3B3-202ENST00000562722 SH2D4BQ5SQS7 431 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 RAET1LQ5VY80 246 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 OR2A2Q6IF42 318 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 SYT10Q6XYQ8 523 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 SLC44A2Q8IWA5 706 aaPredicted RBP11.76□□□□□ -0.53
SF3B3-202ENST00000562722 MEIOBQ8N635 442 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 CDYL2Q8N8U2 506 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 ZNF675Q8TD23 568 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 ZNF592Q92610 1267 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 PIK3IP1Q96FE7 263 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 SLC35A4Q96G79 324 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 ZNF681Q96N22 645 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 DOCK7Q96N67 2140 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 BTBD9Q96Q07 612 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 PAFAH2Q99487 392 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 MED18Q9BUE0 208 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 UBTD1Q9HAC8 227 aa11.76□□□□□ -0.53
SF3B3-202ENST00000562722 ZNF226Q9NYT6 803 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms