RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 VCXQ9H320 206 aa6.11□□□□□ -1.43
CAPN3-210ENST00000561817 ANKRA2Q9H9E1 313 aa6.11□□□□□ -1.43
CAPN3-210ENST00000561817 SMURF2Q9HAU4 748 aa6.11□□□□□ -1.43
CAPN3-210ENST00000561817 CLK4Q9HAZ1 481 aaKnown RBP6.11□□□□□ -1.43
CAPN3-210ENST00000561817 FSCN3Q9NQT6 498 aa6.11□□□□□ -1.43
CAPN3-210ENST00000561817 TPSG1Q9NRR2 321 aa6.11□□□□□ -1.43
CAPN3-210ENST00000561817 ZCCHC3Q9NUD5 404 aaKnown RBP6.11□□□□□ -1.43
CAPN3-210ENST00000561817 ADPRHL2Q9NX46 363 aa6.11□□□□□ -1.43
CAPN3-210ENST00000561817 THUMPD1Q9NXG2 353 aaKnown RBP6.11□□□□□ -1.43
CAPN3-210ENST00000561817 NLGN3Q9NZ94 848 aa6.11□□□□□ -1.43
CAPN3-210ENST00000561817 TMEM9Q9P0T7 183 aa6.11□□□□□ -1.43
CAPN3-210ENST00000561817 PDP2Q9P2J9 529 aa6.11□□□□□ -1.43
CAPN3-210ENST00000561817 PSME2Q9UL46 239 aa6.11□□□□□ -1.43
CAPN3-210ENST00000561817 PADI4Q9UM07 663 aa6.11□□□□□ -1.43
CAPN3-210ENST00000561817 ENTPD4Q9Y227 616 aa6.11□□□□□ -1.43
CAPN3-210ENST00000561817 ANGPT4Q9Y264 503 aa6.11□□□□□ -1.43
CAPN3-210ENST00000561817 GPR52Q9Y2T5 361 aa6.11□□□□□ -1.43
CAPN3-210ENST00000561817 ZNF451Q9Y4E5 1061 aa6.11□□□□□ -1.43
CAPN3-210ENST00000561817 TMEM184BQ9Y519 407 aaPredicted RBP6.11□□□□□ -1.43
CAPN3-210ENST00000561817 ZNF780BQ9Y6R6 833 aa6.11□□□□□ -1.43
CAPN3-210ENST00000561817 SCN2AQ99250 2005 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 A0A087WV62 115 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 A0A0A6YYC8 382 aaPredicted RBP6.1□□□□□ -1.43
CAPN3-210ENST00000561817 HYKKA2RU49 373 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 MAGEA13PA6NCF6 341 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 EIF4E1BA6NMX2 242 aaKnown RBP6.1□□□□□ -1.43
CAPN3-210ENST00000561817 G3V2T6 193 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 H0YAE9 185 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 I3L1I5 382 aaPredicted RBP6.1□□□□□ -1.43
CAPN3-210ENST00000561817 hCG_2039718K7EN88 272 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 SEMA7AO75326 666 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 NME6O75414 186 aaPredicted RBP6.1□□□□□ -1.43
CAPN3-210ENST00000561817 DIRAS1O95057 198 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 NSA2O95478 260 aaKnown RBP6.1□□□□□ -1.43
CAPN3-210ENST00000561817 ZBTB11O95625 1053 aaPredicted RBP6.1□□□□□ -1.43
CAPN3-210ENST00000561817 FABP3P05413 133 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 BCHEP06276 602 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 CT62P0C5K7 136 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 PF4V1P10720 104 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 GNSP15586 552 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 PNLIPP16233 465 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 PORP16435 677 aaPredicted RBP6.1□□□□□ -1.43
CAPN3-210ENST00000561817 ZNF23P17027 643 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 NAT1P18440 290 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 FPR1P21462 350 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 PRKACGP22612 351 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 TLX1P31314 330 aaPredicted RBP6.1□□□□□ -1.43
CAPN3-210ENST00000561817 GALNSP34059 522 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 CNR2P34972 360 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 HOXD12P35452 270 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 CAPGP40121 348 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 GRK6P43250 576 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 XCR1P46094 333 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 KCNJ5P48544 419 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 KHKP50053 298 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 CHN2P52757 468 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 HMGA2P52926 109 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 GPLD1P80108 840 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 MRPS35P82673 323 aaKnown RBP6.1□□□□□ -1.43
CAPN3-210ENST00000561817 SHC2P98077 582 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 ID2Q02363 134 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 PPP1R8Q12972 351 aaKnown RBP6.1□□□□□ -1.43
CAPN3-210ENST00000561817 TP53BP2Q13625 1128 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 LASP1Q14847 261 aaKnown RBP6.1□□□□□ -1.43
CAPN3-210ENST00000561817 PRICKLE4Q2TBC4 344 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 HLA-BQ31612 363 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 IFI44LQ53G44 452 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 NKAPLQ5M9Q1 402 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 FAAH2Q6GMR7 532 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 TCEAL6Q6IPX3 200 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 MFSD12Q6NUT3 480 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 CDC73Q6P1J9 531 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 FAHD1Q6P587 224 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 WDR74Q6RFH5 385 aaPredicted RBP6.1□□□□□ -1.43
CAPN3-210ENST00000561817 ANGPTL8Q6UXH0 198 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 ZNF574Q6ZN55 896 aaPredicted RBP6.1□□□□□ -1.43
CAPN3-210ENST00000561817 DGAT2L6Q6ZPD8 337 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 OLIG3Q7RTU3 272 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 TMPRSS9Q7Z410 1059 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 BTLAQ7Z6A9 289 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 STK32CQ86UX6 486 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 CYP4Z1Q86W10 505 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 HIPK1Q86Z02 1210 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 ARMC8Q8IUR7 673 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 NCSTNQ92542 709 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 TCEAL3Q969E4 200 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 SLC35A4Q96G79 324 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 TPD52L3Q96J77 140 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 DHRS1Q96LJ7 313 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 RDH12Q96NR8 316 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 OR7D2Q96RA2 312 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 ZNF300Q96RE9 604 aaPredicted RBP6.1□□□□□ -1.43
CAPN3-210ENST00000561817 EPYCQ99645 322 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 TREX2Q9BQ50 279 aaPredicted RBP6.1□□□□□ -1.43
CAPN3-210ENST00000561817 CCDC3Q9BQI4 270 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 WFDC6Q9BQY6 131 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 FUZQ9BT04 418 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 AMBRA1Q9C0C7 1298 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 SLC38A1Q9H2H9 487 aa6.1□□□□□ -1.43
CAPN3-210ENST00000561817 Q9H521 79 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms