RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 RHOXF2BP0C7M4 288 aa10.57□□□□□ -0.72
USP3-220ENST00000561381 TMIGD3P0DMS9 266 aaPredicted RBP10.57□□□□□ -0.72
USP3-220ENST00000561381 EPXP11678 715 aa10.57□□□□□ -0.72
USP3-220ENST00000561381 CYP4B1P13584 511 aa10.57□□□□□ -0.72
USP3-220ENST00000561381 CPN1P15169 458 aa10.57□□□□□ -0.72
USP3-220ENST00000561381 TCEA1P23193 301 aaKnown RBP10.57□□□□□ -0.72
USP3-220ENST00000561381 DNASE1P24855 282 aa10.57□□□□□ -0.72
USP3-220ENST00000561381 GCAP28676 217 aa10.57□□□□□ -0.72
USP3-220ENST00000561381 OPRM1P35372 400 aa10.57□□□□□ -0.72
USP3-220ENST00000561381 HTR6P50406 440 aa10.57□□□□□ -0.72
USP3-220ENST00000561381 DGKQP52824 942 aa10.57□□□□□ -0.72
USP3-220ENST00000561381 TRA2BP62995 288 aaKnown RBP10.57□□□□□ -0.72
USP3-220ENST00000561381 HMGCS1Q01581 520 aa10.57□□□□□ -0.72
USP3-220ENST00000561381 FOXD4Q12950 439 aaPredicted RBP10.57□□□□□ -0.72
USP3-220ENST00000561381 SNTA1Q13424 505 aa10.57□□□□□ -0.72
USP3-220ENST00000561381 RCAN2Q14206 197 aa10.57□□□□□ -0.72
USP3-220ENST00000561381 SF3B4Q15427 424 aaKnown RBP eCLIP10.57□□□□□ -0.722e-7■■■■■ 32.9
USP3-220ENST00000561381 ZNF678Q5SXM1 525 aa10.57□□□□□ -0.72
USP3-220ENST00000561381 OR5M10Q6IEU7 315 aa10.57□□□□□ -0.72
USP3-220ENST00000561381 MMGT1Q8N4V1 131 aa10.57□□□□□ -0.72
USP3-220ENST00000561381 CHDHQ8NE62 594 aaPredicted RBP10.57□□□□□ -0.72
USP3-220ENST00000561381 OR9A2Q8NGT5 310 aa10.57□□□□□ -0.72
USP3-220ENST00000561381 EXOSC8Q96B26 276 aaKnown RBP10.57□□□□□ -0.72
USP3-220ENST00000561381 INTS12Q96CB8 462 aaKnown RBP10.57□□□□□ -0.72
USP3-220ENST00000561381 POM121Q96HA1 1249 aa10.57□□□□□ -0.72
USP3-220ENST00000561381 COL21A1Q96P44 957 aa10.57□□□□□ -0.72
USP3-220ENST00000561381 TMEM237Q96Q45 408 aa10.57□□□□□ -0.72
USP3-220ENST00000561381 ADOQ96SZ5 270 aa10.57□□□□□ -0.72
USP3-220ENST00000561381 ACPTQ9BZG2 426 aa10.57□□□□□ -0.72
USP3-220ENST00000561381 OR2B2Q9GZK3 357 aa10.57□□□□□ -0.72
USP3-220ENST00000561381 PRODH2Q9UF12 536 aa10.57□□□□□ -0.72
USP3-220ENST00000561381 MCM8Q9UJA3 840 aa10.57□□□□□ -0.72
USP3-220ENST00000561381 DLGAP4Q9Y2H0 992 aa10.57□□□□□ -0.72
USP3-220ENST00000561381 GPR55Q9Y2T6 319 aaPredicted RBP10.57□□□□□ -0.72
USP3-220ENST00000561381 HRNRQ86YZ3 2850 aaPredicted RBP10.56□□□□□ -0.72
USP3-220ENST00000561381 A0A087WUV0 522 aaPredicted RBP10.56□□□□□ -0.72
USP3-220ENST00000561381 A0A1W2PPR1 153 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 OR6C70A6NIJ9 312 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 CLCA1A8K7I4 914 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 H0Y3Z8 333 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 PCDH7O60245 1069 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 CBR3O75828 277 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 IL18BPO95998 194 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 AVPP01185 164 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 SNRPAP09012 282 aaKnown RBP10.56□□□□□ -0.72
USP3-220ENST00000561381 CT45A8P0DMV1 189 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 CT45A9P0DMV2 189 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 LHX2P50458 406 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 GFRA1P56159 465 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 DCAF7P61962 342 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 RASA2Q15283 850 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 POU4F3Q15319 338 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 WHAMMP3Q1A5X7 153 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 PRSS53Q2L4Q9 553 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 CT45A2Q5DJT8 189 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 FBXW10Q5XX13 1052 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 SCIMPQ6UWF3 145 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 PAMR1Q6UXH9 720 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 NPSR1Q6W5P4 371 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 GPRIN3Q6ZVF9 776 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 ADGRE4PQ86SQ3 457 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 LUZP2Q86TE4 346 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 KIF18BQ86Y91 864 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 PLCZ1Q86YW0 608 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 GCNT2Q8N0V5 402 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 OR4N2Q8NGD1 307 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 ZNF675Q8TD23 568 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 SLC35A4Q96G79 324 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 APIPQ96GX9 242 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 BTBD9Q96Q07 612 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 RBM24Q9BX46 236 aaKnown RBP10.56□□□□□ -0.72
USP3-220ENST00000561381 EBPLQ9BY08 206 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 GSX1Q9H4S2 264 aaPredicted RBP10.56□□□□□ -0.72
USP3-220ENST00000561381 NMRK1Q9NWW6 199 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 TAS2R10Q9NYW0 307 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 WIF1Q9Y5W5 379 aa10.56□□□□□ -0.72
USP3-220ENST00000561381 EXOC1LA0A1B0GW35 172 aa10.55□□□□□ -0.72
USP3-220ENST00000561381 TSPAN2O60636 221 aa10.55□□□□□ -0.72
USP3-220ENST00000561381 ERN1O75460 977 aaKnown RBP10.55□□□□□ -0.72
USP3-220ENST00000561381 RCBTB2O95199 551 aa10.55□□□□□ -0.72
USP3-220ENST00000561381 ATE1O95260 518 aa10.55□□□□□ -0.72
USP3-220ENST00000561381 KRT6AP02538 564 aa10.55□□□□□ -0.72
USP3-220ENST00000561381 KRT6BP04259 564 aa10.55□□□□□ -0.72
USP3-220ENST00000561381 HSD3B1P14060 373 aa10.55□□□□□ -0.72
USP3-220ENST00000561381 HSD3B2P26439 372 aa10.55□□□□□ -0.72
USP3-220ENST00000561381 GCKP35557 465 aa10.55□□□□□ -0.72
USP3-220ENST00000561381 KRT6CP48668 564 aa10.55□□□□□ -0.72
USP3-220ENST00000561381 PPP2R2AP63151 447 aa10.55□□□□□ -0.72
USP3-220ENST00000561381 ADAM8P78325 824 aa10.55□□□□□ -0.72
USP3-220ENST00000561381 SORDQ00796 357 aa10.55□□□□□ -0.72
USP3-220ENST00000561381 BTKQ06187 659 aa10.55□□□□□ -0.72
USP3-220ENST00000561381 CSTF3Q12996 717 aaKnown RBP10.55□□□□□ -0.72
USP3-220ENST00000561381 LCE2AQ5TA79 106 aaPredicted RBP10.55□□□□□ -0.72
USP3-220ENST00000561381 ENPP6Q6UWR7 440 aa10.55□□□□□ -0.72
USP3-220ENST00000561381 LARP4Q71RC2 724 aaKnown RBP eCLIP10.55□□□□□ -0.72
USP3-220ENST00000561381 IFNEQ86WN2 208 aa10.55□□□□□ -0.72
USP3-220ENST00000561381 OR7G2Q8NG99 324 aa10.55□□□□□ -0.72
USP3-220ENST00000561381 METTL6Q8TCB7 284 aa10.55□□□□□ -0.72
USP3-220ENST00000561381 C16orf78Q8WTQ4 265 aa10.55□□□□□ -0.72
USP3-220ENST00000561381 ZNF592Q92610 1267 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms