RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 ZNF708P17019 499 aa10.73□□□□□ -0.69
CARMIL3-204ENST00000561354 CNTFP26441 200 aa10.73□□□□□ -0.69
CARMIL3-204ENST00000561354 ECHS1P30084 290 aa10.73□□□□□ -0.69
CARMIL3-204ENST00000561354 LHX2P50458 406 aa10.73□□□□□ -0.69
CARMIL3-204ENST00000561354 MAPK12P53778 367 aa10.73□□□□□ -0.69
CARMIL3-204ENST00000561354 PLTPP55058 493 aa10.73□□□□□ -0.69
CARMIL3-204ENST00000561354 CLDN18P56856 261 aa10.73□□□□□ -0.69
CARMIL3-204ENST00000561354 HMGCS1Q01581 520 aa10.73□□□□□ -0.69
CARMIL3-204ENST00000561354 EXOSC7Q15024 291 aaKnown RBP10.73□□□□□ -0.69
CARMIL3-204ENST00000561354 Q5PR19 223 aa10.73□□□□□ -0.69
CARMIL3-204ENST00000561354 MROH9Q5TGP6 573 aa10.73□□□□□ -0.69
CARMIL3-204ENST00000561354 TAOK1Q7L7X3 1001 aa10.73□□□□□ -0.69
CARMIL3-204ENST00000561354 CROCCP2Q86T23 111 aa10.73□□□□□ -0.69
CARMIL3-204ENST00000561354 PLCZ1Q86YW0 608 aa10.73□□□□□ -0.69
CARMIL3-204ENST00000561354 P3H2Q8IVL5 708 aa10.73□□□□□ -0.69
CARMIL3-204ENST00000561354 GCNT2Q8N0V5 402 aa10.73□□□□□ -0.69
CARMIL3-204ENST00000561354 OR52B6Q8NGF0 335 aa10.73□□□□□ -0.69
CARMIL3-204ENST00000561354 ATP6V1E2Q96A05 226 aa10.73□□□□□ -0.69
CARMIL3-204ENST00000561354 TMCO6Q96DC7 493 aa10.73□□□□□ -0.69
CARMIL3-204ENST00000561354 MRPL1Q9BYD6 325 aaKnown RBP10.73□□□□□ -0.69
CARMIL3-204ENST00000561354 TAS2R10Q9NYW0 307 aa10.73□□□□□ -0.69
CARMIL3-204ENST00000561354 CPSF2Q9P2I0 782 aaKnown RBP10.73□□□□□ -0.69
CARMIL3-204ENST00000561354 PRODH2Q9UF12 536 aa10.73□□□□□ -0.69
CARMIL3-204ENST00000561354 PSME2Q9UL46 239 aa10.73□□□□□ -0.69
CARMIL3-204ENST00000561354 PLLPQ9Y342 182 aa10.73□□□□□ -0.69
CARMIL3-204ENST00000561354 MED12LQ86YW9 2145 aa10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 FRG2CA6NGY1 282 aa10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 H3BQF6 201 aa10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 STX16-NPEPL1H3BU86 382 aa10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 PLOD2O00469 737 aa10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 STX16O14662 325 aa10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 ABCB7O75027 752 aa10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 ERAL1O75616 437 aaKnown RBP10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 FEN1P39748 380 aaKnown RBP10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 ARL1P40616 181 aaPredicted RBP10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 MC3RP41968 323 aa10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 STARP49675 285 aa10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 EMDP50402 254 aa10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 CCNG1P51959 295 aa10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 IFT88Q13099 833 aa10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 TRAF3Q13114 568 aa10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 BCL2A1Q16548 175 aa10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 GGTA1PQ4G0N0 100 aa10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 TECRLQ5HYJ1 363 aa10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 TTC19Q6DKK2 380 aaPredicted RBP10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 GRAMD2AQ8IUY3 354 aa10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 PTGR2Q8N8N7 351 aaPredicted RBP10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 GBP7Q8N8V2 638 aaPredicted RBP10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 SIMC1Q8NDZ2 872 aa10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 OR52R1Q8NGF1 315 aa10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 RDH11Q8TC12 318 aa10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 FBXO25Q8TCJ0 367 aa10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 NUDT8Q8WV74 236 aa10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 TM4SF18Q96CE8 201 aa10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 SLC35A4Q96G79 324 aa10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 COL21A1Q96P44 957 aa10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 ZBTB26Q9HCK0 441 aa10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 ZNF226Q9NYT6 803 aa10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 C6orf203Q9P0P8 240 aaPredicted RBP10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 TMCO1Q9UM00 188 aa10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 GPR55Q9Y2T6 319 aaPredicted RBP10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 FN1P02751 2386 aaKnown RBP10.72□□□□□ -0.69
CARMIL3-204ENST00000561354 DNHD1Q96M86 4753 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 A0A1W2PNV4 684 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 DEFB108AA8MXU0 73 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 BCAS2O75934 225 aaPredicted RBP10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 TGM6O95932 706 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 ALDOAP04075 364 aaKnown RBP10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 FPR1P21462 350 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 TYK2P29597 1187 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 CPOXP36551 454 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 TRA2BP62995 288 aaKnown RBP10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 PSPHP78330 225 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 FAM27E3Q08E93 113 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 GALNT1Q10472 559 aaPredicted RBP10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 ACKR1Q16570 336 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 TRMT12Q53H54 448 aaKnown RBP10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 OR2A2Q6IF42 318 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 PLXDC2Q6UX71 529 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 COMMD6Q7Z4G1 85 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 CCDC25Q86WR0 208 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 CIARTQ8N365 385 aaPredicted RBP10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 ADCY4Q8NFM4 1077 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 ZNF675Q8TD23 568 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 RNF138Q8WVD3 245 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 TMBIM1Q969X1 311 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 KLHL29Q96CT2 875 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 ERP27Q96DN0 273 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 STARD4Q96DR4 205 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 CNRIP1Q96F85 164 aaPredicted RBP10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 ZNF681Q96N22 645 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 SFXN2Q96NB2 322 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 WFIKKN1Q96NZ8 548 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 BTBD9Q96Q07 612 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 BDH2Q9BUT1 245 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 ELOVL6Q9H5J4 265 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 BRF2Q9HAW0 419 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 ZDHHC18Q9NUE0 388 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 ELOVL5Q9NYP7 299 aa10.71□□□□□ -0.69
CARMIL3-204ENST00000561354 EHD3Q9NZN3 535 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms