RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 CASP3P42574 277 aa18.27■□□□□ 0.52
TSPAN3-210ENST00000561277 ZNHIT3Q15649 155 aaPredicted RBP18.27■□□□□ 0.52
TSPAN3-210ENST00000561277 TBCELQ5QJ74 424 aa18.27■□□□□ 0.52
TSPAN3-210ENST00000561277 BNC2Q6ZN30 1099 aaPredicted RBP18.27■□□□□ 0.52
TSPAN3-210ENST00000561277 NUP54Q7Z3B4 507 aa18.27■□□□□ 0.52
TSPAN3-210ENST00000561277 FJX1Q86VR8 437 aa18.27■□□□□ 0.52
TSPAN3-210ENST00000561277 FAM109AQ8N4B1 249 aa18.27■□□□□ 0.52
TSPAN3-210ENST00000561277 NUP43Q8NFH3 380 aa18.27■□□□□ 0.52
TSPAN3-210ENST00000561277 PIWIL2Q8TC59 973 aaKnown RBP18.27■□□□□ 0.52
TSPAN3-210ENST00000561277 ZNF597Q96LX8 424 aa18.27■□□□□ 0.52
TSPAN3-210ENST00000561277 COL21A1Q96P44 957 aa18.27■□□□□ 0.52
TSPAN3-210ENST00000561277 NODALQ96S42 347 aa18.27■□□□□ 0.52
TSPAN3-210ENST00000561277 DPY30Q9C005 99 aa18.27■□□□□ 0.52
TSPAN3-210ENST00000561277 C3orf14Q9HBI5 128 aa18.27■□□□□ 0.52
TSPAN3-210ENST00000561277 ZFP64Q9NPA5 681 aa18.27■□□□□ 0.52
TSPAN3-210ENST00000561277 SNX8Q9Y5X2 465 aa18.27■□□□□ 0.52
TSPAN3-210ENST00000561277 A0A1B0GTH9 108 aa18.26■□□□□ 0.51
TSPAN3-210ENST00000561277 LRRC3CA6NJW4 275 aa18.26■□□□□ 0.51
TSPAN3-210ENST00000561277 IFI6P09912 130 aa18.26■□□□□ 0.51
TSPAN3-210ENST00000561277 RNF224P0DH78 156 aa18.26■□□□□ 0.51
TSPAN3-210ENST00000561277 ABOP16442 354 aa18.26■□□□□ 0.51
TSPAN3-210ENST00000561277 MASP1P48740 699 aa18.26■□□□□ 0.51
TSPAN3-210ENST00000561277 NME5P56597 212 aa18.26■□□□□ 0.51
TSPAN3-210ENST00000561277 C4orf17Q53FE4 359 aa18.26■□□□□ 0.51
TSPAN3-210ENST00000561277 TMEM198Q66K66 360 aa18.26■□□□□ 0.51
TSPAN3-210ENST00000561277 NXNQ6DKJ4 435 aa18.26■□□□□ 0.51
TSPAN3-210ENST00000561277 RGS9BPQ6ZS82 235 aa18.26■□□□□ 0.51
TSPAN3-210ENST00000561277 LRRC34Q8IZ02 419 aa18.26■□□□□ 0.51
TSPAN3-210ENST00000561277 FBXO30Q8TB52 745 aa18.26■□□□□ 0.51
TSPAN3-210ENST00000561277 EFHD2Q96C19 240 aaPredicted RBP18.26■□□□□ 0.51
TSPAN3-210ENST00000561277 COQ8BQ96D53 544 aa18.26■□□□□ 0.51
TSPAN3-210ENST00000561277 DUSP26Q9BV47 211 aa18.26■□□□□ 0.51
TSPAN3-210ENST00000561277 BHLHE41Q9C0J9 482 aaPredicted RBP18.26■□□□□ 0.51
TSPAN3-210ENST00000561277 ACBD3Q9H3P7 528 aa18.26■□□□□ 0.51
TSPAN3-210ENST00000561277 ZDHHC11Q9H8X9 412 aa18.26■□□□□ 0.51
TSPAN3-210ENST00000561277 Q9N2J8 555 aa18.26■□□□□ 0.51
TSPAN3-210ENST00000561277 SLCO1B3Q9NPD5 702 aa18.26■□□□□ 0.51
TSPAN3-210ENST00000561277 INTS9Q9NV88 658 aaKnown RBP18.26■□□□□ 0.51
TSPAN3-210ENST00000561277 ZNF446Q9NWS9 450 aa18.26■□□□□ 0.51
TSPAN3-210ENST00000561277 KLRF1Q9NZS2 232 aa18.26■□□□□ 0.51
TSPAN3-210ENST00000561277 TINAGQ9UJW2 476 aa18.26■□□□□ 0.51
TSPAN3-210ENST00000561277 ANKRD33BA6NCL7 494 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 OR6C70A6NIJ9 312 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 EMC8O43402 210 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 C6orf47O95873 294 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 CELA3AP09093 270 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 ALDOCP09972 364 aaKnown RBP18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 RFPL3SP0C7P2 107 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 C21orf58P58505 322 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 MLC1Q15049 377 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 OGFOD2Q6N063 350 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 MAVSQ7Z434 540 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 FGD2Q7Z6J4 655 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 CHERPQ8IWX8 916 aaKnown RBP18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 SSC4DQ8WTU2 575 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 OR5P2Q8WZ92 322 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 MS4A4EQ96PG1 132 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 ANGPTL4Q9BY76 406 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 ZNF703Q9H7S9 590 aaPredicted RBP18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 GALNT9Q9HCQ5 603 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 SIRT3Q9NTG7 399 aaPredicted RBP18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 ZCCHC3Q9NUD5 404 aaKnown RBP18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 LIPGQ9Y5X9 500 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 C2orf72A6NCS6 295 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 CFLARO15519 480 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 ABCB7O75027 752 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 SNX4O95219 450 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 RFX3P48380 749 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 CASP6P55212 293 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 PSPHP78330 225 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 PRR5P85299 388 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 GAB1Q13480 694 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 C3AR1Q16581 482 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 HYAL4Q2M3T9 481 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 SLC9B1Q4ZJI4 515 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 OR4F3Q6IEY1 312 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 CAMKMTQ7Z624 323 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 PACS2Q86VP3 889 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 SPPL2CQ8IUH8 684 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 NATD1Q8N6N6 113 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 CEP70Q8NHQ1 597 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 SLC9A6Q92581 669 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 TMCO6Q96DC7 493 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 FAM120BQ96EK7 910 aaKnown RBP18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 OTUB1Q96FW1 271 aaPredicted RBP18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 SLC35A4Q96G79 324 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 C7orf26Q96N11 449 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 LMF2Q9BU23 707 aaKnown RBP18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 OSBPL11Q9BXB4 747 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 CBLCQ9ULV8 474 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 MAPRE3Q9UPY8 281 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 NINQ8N4C6 2090 aa18.25■□□□□ 0.51
TSPAN3-210ENST00000561277 PRAMEF25A6NGN4 478 aa18.24■□□□□ 0.51
TSPAN3-210ENST00000561277 TSPAN2O60636 221 aa18.24■□□□□ 0.51
TSPAN3-210ENST00000561277 TRIM3O75382 744 aaPredicted RBP18.24■□□□□ 0.51
TSPAN3-210ENST00000561277 GABRA3P34903 492 aa18.24■□□□□ 0.51
TSPAN3-210ENST00000561277 PTGS2P35354 604 aa18.24■□□□□ 0.51
TSPAN3-210ENST00000561277 SOAT1P35610 550 aa18.24■□□□□ 0.51
TSPAN3-210ENST00000561277 CA7P43166 264 aa18.24■□□□□ 0.51
TSPAN3-210ENST00000561277 EFR3AQ14156 821 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms