RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 PYGBP11216 843 aa14.75□□□□□ -0.05
SNX1-213ENST00000561026 CYP4B1P13584 511 aa14.75□□□□□ -0.05
SNX1-213ENST00000561026 TIA1P31483 386 aaKnown RBP eCLIP14.75□□□□□ -0.059e-6■□□□□ 8.2
SNX1-213ENST00000561026 OPRM1P35372 400 aa14.75□□□□□ -0.05
SNX1-213ENST00000561026 AGFG1P52594 562 aaKnown RBP14.75□□□□□ -0.05
SNX1-213ENST00000561026 CORO7P57737 925 aa14.75□□□□□ -0.05
SNX1-213ENST00000561026 PSPHP78330 225 aa14.75□□□□□ -0.05
SNX1-213ENST00000561026 SLC29A2Q14542 456 aa14.75□□□□□ -0.05
SNX1-213ENST00000561026 CEBPEQ15744 281 aa14.75□□□□□ -0.05
SNX1-213ENST00000561026 ERCC6LQ2NKX8 1250 aa14.75□□□□□ -0.05
SNX1-213ENST00000561026 FLYWCH1Q4VC44 716 aa14.75□□□□□ -0.05
SNX1-213ENST00000561026 PLCZ1Q86YW0 608 aa14.75□□□□□ -0.05
SNX1-213ENST00000561026 OR14L1PQ8NHC6 308 aa14.75□□□□□ -0.05
SNX1-213ENST00000561026 NINJ1Q92982 152 aa14.75□□□□□ -0.05
SNX1-213ENST00000561026 KCNA7Q96RP8 456 aa14.75□□□□□ -0.05
SNX1-213ENST00000561026 ADOQ96SZ5 270 aa14.75□□□□□ -0.05
SNX1-213ENST00000561026 GIMAP4Q9NUV9 329 aa14.75□□□□□ -0.05
SNX1-213ENST00000561026 SIRT5Q9NXA8 310 aa14.75□□□□□ -0.05
SNX1-213ENST00000561026 DCDC2Q9UHG0 476 aa14.75□□□□□ -0.05
SNX1-213ENST00000561026 SERTM1A2A2V5 107 aa14.74□□□□□ -0.05
SNX1-213ENST00000561026 A6NNC1 897 aa14.74□□□□□ -0.05
SNX1-213ENST00000561026 PLOD3O60568 738 aa14.74□□□□□ -0.05
SNX1-213ENST00000561026 TSPAN2O60636 221 aa14.74□□□□□ -0.05
SNX1-213ENST00000561026 ERN1O75460 977 aaKnown RBP14.74□□□□□ -0.05
SNX1-213ENST00000561026 IL18BPO95998 194 aa14.74□□□□□ -0.05
SNX1-213ENST00000561026 ANXA4P09525 319 aaPredicted RBP14.74□□□□□ -0.05
SNX1-213ENST00000561026 FAM153BP0C7A2 387 aa14.74□□□□□ -0.05
SNX1-213ENST00000561026 MPIP34949 423 aa14.74□□□□□ -0.05
SNX1-213ENST00000561026 GSTM5P46439 218 aa14.74□□□□□ -0.05
SNX1-213ENST00000561026 SLCO1A2P46721 670 aa14.74□□□□□ -0.05
SNX1-213ENST00000561026 BTKQ06187 659 aa14.74□□□□□ -0.05
SNX1-213ENST00000561026 FAM153CQ494X1 144 aa14.74□□□□□ -0.05
SNX1-213ENST00000561026 ENPP6Q6UWR7 440 aa14.74□□□□□ -0.05
SNX1-213ENST00000561026 KIF18BQ86Y91 864 aa14.74□□□□□ -0.05
SNX1-213ENST00000561026 TRIM42Q8IWZ5 723 aa14.74□□□□□ -0.05
SNX1-213ENST00000561026 CNPY4Q8N129 248 aa14.74□□□□□ -0.05
SNX1-213ENST00000561026 C9orf106Q8NAJ2 232 aa14.74□□□□□ -0.05
SNX1-213ENST00000561026 OR7G2Q8NG99 324 aa14.74□□□□□ -0.05
SNX1-213ENST00000561026 RDH11Q8TC12 318 aa14.74□□□□□ -0.05
SNX1-213ENST00000561026 MZB1Q8WU39 189 aa14.74□□□□□ -0.05
SNX1-213ENST00000561026 TUBA1CQ9BQE3 449 aa14.74□□□□□ -0.05
SNX1-213ENST00000561026 EBPLQ9BY08 206 aa14.74□□□□□ -0.05
SNX1-213ENST00000561026 TXLNGYQ9BZA5 131 aa14.74□□□□□ -0.05
SNX1-213ENST00000561026 LIME1Q9H400 295 aa14.74□□□□□ -0.05
SNX1-213ENST00000561026 GSTO2Q9H4Y5 243 aa14.74□□□□□ -0.05
SNX1-213ENST00000561026 TAS2R10Q9NYW0 307 aa14.74□□□□□ -0.05
SNX1-213ENST00000561026 JKAMPQ9P055 326 aa14.74□□□□□ -0.05
SNX1-213ENST00000561026 PSMC3IPQ9P2W1 217 aaPredicted RBP14.74□□□□□ -0.05
SNX1-213ENST00000561026 CBLCQ9ULV8 474 aa14.74□□□□□ -0.05
SNX1-213ENST00000561026 WIF1Q9Y5W5 379 aa14.74□□□□□ -0.05
SNX1-213ENST00000561026 KIAA1549Q9HCM3 1950 aa14.74□□□□□ -0.05
SNX1-213ENST00000561026 TUBAL3A6NHL2 446 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 KIF2AO00139 706 aaPredicted RBP14.73□□□□□ -0.05
SNX1-213ENST00000561026 UBFD1O14562 309 aaKnown RBP14.73□□□□□ -0.05
SNX1-213ENST00000561026 DDCP20711 480 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 SRD5A2P31213 254 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 FOXA1P55317 472 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 GFRA1P56159 465 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 SRYQ05066 204 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 EFR3AQ14156 821 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 DAZAP2Q15038 168 aaPredicted RBP14.73□□□□□ -0.05
SNX1-213ENST00000561026 SPDYAQ5MJ70 313 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 SCIMPQ6UWF3 145 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 NPSR1Q6W5P4 371 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 LARP4Q71RC2 724 aaKnown RBP eCLIP14.73□□□□□ -0.05
SNX1-213ENST00000561026 ADGRE4PQ86SQ3 457 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 IFNEQ86WN2 208 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 FAM9CQ8IZT9 166 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 CCNYL1Q8N7R7 359 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 CEP112Q8N8E3 955 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 KIF18AQ8NI77 898 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 RNF138Q8WVD3 245 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 CCDC126Q96EE4 140 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 UCN2Q96RP3 112 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 FOXC2Q99958 501 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 SHCBP1LQ9BZQ2 653 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 STMN4Q9H169 189 aaPredicted RBP14.73□□□□□ -0.05
SNX1-213ENST00000561026 CXXC4Q9H2H0 198 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 FOLH1BQ9HBA9 442 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 MID1IP1Q9NPA3 183 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 CCM2LQ9NUG4 571 aaPredicted RBP14.73□□□□□ -0.05
SNX1-213ENST00000561026 TAS2R9Q9NYW1 312 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 SENP1Q9P0U3 644 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 TBK1Q9UHD2 729 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 ST6GALNAC2Q9UJ37 374 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 FBXL2Q9UKC9 423 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 EMCNQ9ULC0 261 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 MRPS18CQ9Y3D5 142 aaKnown RBP14.73□□□□□ -0.05
SNX1-213ENST00000561026 MPDZO75970 2070 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 PRRC2AP48634 2157 aaKnown RBP14.73□□□□□ -0.05
SNX1-213ENST00000561026 HRNRQ86YZ3 2850 aaPredicted RBP14.73□□□□□ -0.05
SNX1-213ENST00000561026 EEF1E1-BLOC1S5C9J1V9 151 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 G3V2L1 256 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 H0Y3Z8 333 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 EEF1E1O43324 174 aaKnown RBP14.73□□□□□ -0.05
SNX1-213ENST00000561026 TMIGD3P0DMS9 266 aaPredicted RBP14.73□□□□□ -0.05
SNX1-213ENST00000561026 EPXP11678 715 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 TACR1P25103 407 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 IL12BP29460 328 aa14.73□□□□□ -0.05
SNX1-213ENST00000561026 KRT20P35900 424 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms