RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 NCALDP61601 193 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 RPS15P62841 145 aaKnown RBP5.08□□□□□ -1.6
ZEB1-220ENST00000560909 ID2Q02363 134 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 NFYCQ13952 458 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 COL9A2Q14055 689 aaPredicted RBP5.08□□□□□ -1.6
ZEB1-220ENST00000560909 LTB4RQ15722 352 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 ADRM1Q16186 407 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 ZSCAN26Q16670 478 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 GTDC1Q4AE62 458 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 MINDY4Q4G0A6 757 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 TRMT12Q53H54 448 aaKnown RBP5.08□□□□□ -1.6
ZEB1-220ENST00000560909 SFT2D3Q587I9 215 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 PLAG1Q6DJT9 500 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.08□□□□□ -1.6
ZEB1-220ENST00000560909 NANOGP8Q6NSW7 305 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 MFSD12Q6NUT3 480 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 H3F3CQ6NXT2 135 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 FAM180BQ6P0A1 224 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 FDX2Q6P4F2 183 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 BHLHB9Q6PI77 547 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 FAM111BQ6SJ93 734 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 LANCL3Q6ZV70 420 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 NDUFAF7Q7L592 441 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 C6orf120Q7Z4R8 191 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 ARPINQ7Z6K5 226 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 ZAR1Q86SH2 424 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 DHDDSQ86SQ9 333 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 SERPINA11Q86U17 422 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 ANKRD46Q86W74 232 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 GALNT12Q8IXK2 581 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 PGAM4Q8N0Y7 254 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 TRIML2Q8N7C3 387 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 C17orf47Q8NEP4 570 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 OR11G2Q8NGC1 345 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 OR56A1Q8NGH5 318 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 OR52N2Q8NGI0 321 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 OR1N1Q8NGS0 311 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 OR9A2Q8NGT5 310 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 CDC26Q8NHZ8 85 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 M1APQ8TC57 530 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 FAM110BQ8TC76 370 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 ELP5Q8TE02 316 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 DAZLQ92904 295 aaKnown RBP5.08□□□□□ -1.6
ZEB1-220ENST00000560909 RIT1Q92963 219 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 ADIPOR1Q96A54 375 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 TMEM125Q96AQ2 219 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 PPWD1Q96BP3 646 aaKnown RBP5.08□□□□□ -1.6
ZEB1-220ENST00000560909 ART5Q96L15 291 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 VSTM2LQ96N03 204 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 ZNF583Q96ND8 569 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 IP6K3Q96PC2 410 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 DGAT2Q96PD7 388 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 BTBD9Q96Q07 612 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 PANX1Q96RD7 426 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 NPAS2Q99743 824 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 SH3GL1Q99961 368 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 MESP1Q9BRJ9 268 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 BTBD10Q9BSF8 475 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 SPATA9Q9BWV2 254 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 RBCK1Q9BYM8 510 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 DPH1Q9BZG8 443 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 LRMDAQ9H2I8 198 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 SERHL2Q9H4I8 314 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 IKZF5Q9H5V7 419 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 SOX17Q9H6I2 414 aaPredicted RBP5.08□□□□□ -1.6
ZEB1-220ENST00000560909 KAT8Q9H7Z6 458 aaKnown RBP5.08□□□□□ -1.6
ZEB1-220ENST00000560909 NANOGQ9H9S0 305 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 TPT1P8Q9HAU6 139 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 C3orf14Q9HBI5 128 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 CMTM6Q9NX76 183 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 NDE1Q9NXR1 346 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 C19orf25Q9UFG5 118 aaPredicted RBP5.08□□□□□ -1.6
ZEB1-220ENST00000560909 GPN3Q9UHW5 284 aaPredicted RBP5.08□□□□□ -1.6
ZEB1-220ENST00000560909 ZNF223Q9UK11 482 aaPredicted RBP5.08□□□□□ -1.6
ZEB1-220ENST00000560909 PRPF19Q9UMS4 504 aaKnown RBP5.08□□□□□ -1.6
ZEB1-220ENST00000560909 VPS4AQ9UN37 437 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 PCDHGB4Q9UN71 923 aa5.08□□□□□ -1.6
ZEB1-220ENST00000560909 PTRH2Q9Y3E5 179 aaKnown RBP5.08□□□□□ -1.6
ZEB1-220ENST00000560909 MAP1BP46821 2468 aaKnown RBP5.07□□□□□ -1.6
ZEB1-220ENST00000560909 CNTRLQ7Z7A1 2325 aa5.07□□□□□ -1.6
ZEB1-220ENST00000560909 PRAMEF27A3QJZ7 478 aa5.07□□□□□ -1.6
ZEB1-220ENST00000560909 TMEM200CA6NKL6 621 aa5.07□□□□□ -1.6
ZEB1-220ENST00000560909 OR6C76A6NM76 312 aa5.07□□□□□ -1.6
ZEB1-220ENST00000560909 C17orf105B2RV13 164 aa5.07□□□□□ -1.6
ZEB1-220ENST00000560909 HRKO00198 91 aa5.07□□□□□ -1.6
ZEB1-220ENST00000560909 CLIC1O00299 241 aa5.07□□□□□ -1.6
ZEB1-220ENST00000560909 TLX3O43711 291 aaPredicted RBP5.07□□□□□ -1.6
ZEB1-220ENST00000560909 OR10H2O60403 315 aa5.07□□□□□ -1.6
ZEB1-220ENST00000560909 EIF4EBP3O60516 100 aaPredicted RBP5.07□□□□□ -1.6
ZEB1-220ENST00000560909 ICMTO60725 284 aa5.07□□□□□ -1.6
ZEB1-220ENST00000560909 NKX2-2O95096 273 aa5.07□□□□□ -1.6
ZEB1-220ENST00000560909 CPSF4O95639 269 aaKnown RBP5.07□□□□□ -1.6
ZEB1-220ENST00000560909 HPP00738 406 aa5.07□□□□□ -1.6
ZEB1-220ENST00000560909 C1QCP02747 245 aa5.07□□□□□ -1.6
ZEB1-220ENST00000560909 HMGN2P05204 90 aaKnown RBP5.07□□□□□ -1.6
ZEB1-220ENST00000560909 GSNP06396 782 aa5.07□□□□□ -1.6
ZEB1-220ENST00000560909 CT45A8P0DMV1 189 aa5.07□□□□□ -1.6
ZEB1-220ENST00000560909 CT45A9P0DMV2 189 aa5.07□□□□□ -1.6
ZEB1-220ENST00000560909 HSD17B1P14061 328 aa5.07□□□□□ -1.6
ZEB1-220ENST00000560909 LIFP15018 202 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms