RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 STSP08842 583 aa10.95□□□□□ -0.66
LDLR-212ENST00000560467 ZGLP1P0C6A0 271 aa10.95□□□□□ -0.66
LDLR-212ENST00000560467 CD1EP15812 388 aa10.95□□□□□ -0.66
LDLR-212ENST00000560467 GALNSP34059 522 aa10.95□□□□□ -0.66
LDLR-212ENST00000560467 FRKP42685 505 aaPredicted RBP10.95□□□□□ -0.66
LDLR-212ENST00000560467 STT3AP46977 705 aa10.95□□□□□ -0.66
LDLR-212ENST00000560467 EMP2P54851 167 aa10.95□□□□□ -0.66
LDLR-212ENST00000560467 ID2Q02363 134 aa10.95□□□□□ -0.66
LDLR-212ENST00000560467 LIPEQ05469 1076 aa10.95□□□□□ -0.66
LDLR-212ENST00000560467 FADDQ13158 208 aa10.95□□□□□ -0.66
LDLR-212ENST00000560467 ZNHIT3Q15649 155 aaPredicted RBP10.95□□□□□ -0.66
LDLR-212ENST00000560467 SYT16Q17RD7 645 aa10.95□□□□□ -0.66
LDLR-212ENST00000560467 ATAD3BQ5T9A4 648 aa10.95□□□□□ -0.66
LDLR-212ENST00000560467 FAM180AQ6UWF9 173 aa10.95□□□□□ -0.66
LDLR-212ENST00000560467 GALNT12Q8IXK2 581 aa10.95□□□□□ -0.66
LDLR-212ENST00000560467 SLC15A3Q8IY34 581 aa10.95□□□□□ -0.66
LDLR-212ENST00000560467 OR2T12Q8NG77 320 aa10.95□□□□□ -0.66
LDLR-212ENST00000560467 OR11G2Q8NGC1 345 aa10.95□□□□□ -0.66
LDLR-212ENST00000560467 FBXO27Q8NI29 283 aa10.95□□□□□ -0.66
LDLR-212ENST00000560467 PSMA8Q8TAA3 256 aa10.95□□□□□ -0.66
LDLR-212ENST00000560467 STT3BQ8TCJ2 826 aa10.95□□□□□ -0.66
LDLR-212ENST00000560467 DAZLQ92904 295 aaKnown RBP10.95□□□□□ -0.66
LDLR-212ENST00000560467 STMN2Q93045 179 aa10.95□□□□□ -0.66
LDLR-212ENST00000560467 THOC3Q96J01 351 aaKnown RBP10.95□□□□□ -0.66
LDLR-212ENST00000560467 MAGED4Q96JG8 741 aa10.95□□□□□ -0.66
LDLR-212ENST00000560467 SLC39A3Q9BRY0 314 aa10.95□□□□□ -0.66
LDLR-212ENST00000560467 LHPPQ9H008 270 aa10.95□□□□□ -0.66
LDLR-212ENST00000560467 ALG2Q9H553 416 aa10.95□□□□□ -0.66
LDLR-212ENST00000560467 EPS8L2Q9H6S3 715 aa10.95□□□□□ -0.66
LDLR-212ENST00000560467 CACYBPQ9HB71 228 aaKnown RBP10.95□□□□□ -0.66
LDLR-212ENST00000560467 SERHLQ9NQF3 203 aa10.95□□□□□ -0.66
LDLR-212ENST00000560467 OLAHQ9NV23 265 aa10.95□□□□□ -0.66
LDLR-212ENST00000560467 VAPAQ9P0L0 249 aa10.95□□□□□ -0.66
LDLR-212ENST00000560467 CFL2Q9Y281 166 aa10.95□□□□□ -0.66
LDLR-212ENST00000560467 MDC1Q14676 2089 aaKnown RBP10.94□□□□□ -0.66
LDLR-212ENST00000560467 PLOD2O00469 737 aa10.94□□□□□ -0.66
LDLR-212ENST00000560467 DNAJB6O75190 326 aa10.94□□□□□ -0.66
LDLR-212ENST00000560467 MED26O95402 600 aa10.94□□□□□ -0.66
LDLR-212ENST00000560467 ONECUT2O95948 504 aa10.94□□□□□ -0.66
LDLR-212ENST00000560467 IFNA14P01570 189 aa10.94□□□□□ -0.66
LDLR-212ENST00000560467 IFI6P09912 130 aa10.94□□□□□ -0.66
LDLR-212ENST00000560467 TCN1P20061 433 aaPredicted RBP10.94□□□□□ -0.66
LDLR-212ENST00000560467 CDKN2CP42773 168 aa10.94□□□□□ -0.66
LDLR-212ENST00000560467 MTPNP58546 118 aa10.94□□□□□ -0.66
LDLR-212ENST00000560467 KCNJ2P63252 427 aa10.94□□□□□ -0.66
LDLR-212ENST00000560467 DMTNQ08495 405 aa10.94□□□□□ -0.66
LDLR-212ENST00000560467 TRAP1Q12931 704 aaKnown RBP10.94□□□□□ -0.66
LDLR-212ENST00000560467 MFAP5Q13361 173 aa10.94□□□□□ -0.66
LDLR-212ENST00000560467 CEBPEQ15744 281 aa10.94□□□□□ -0.66
LDLR-212ENST00000560467 FAM180BQ6P0A1 224 aa10.94□□□□□ -0.66
LDLR-212ENST00000560467 ZCCHC12Q6PEW1 402 aa10.94□□□□□ -0.66
LDLR-212ENST00000560467 TMEM107Q6UX40 140 aa10.94□□□□□ -0.66
LDLR-212ENST00000560467 ISLR2Q6UXK2 745 aa10.94□□□□□ -0.66
LDLR-212ENST00000560467 C6orf120Q7Z4R8 191 aa10.94□□□□□ -0.66
LDLR-212ENST00000560467 NET1Q7Z628 596 aaPredicted RBP10.94□□□□□ -0.66
LDLR-212ENST00000560467 SERPINA11Q86U17 422 aa10.94□□□□□ -0.66
LDLR-212ENST00000560467 SLC30A8Q8IWU4 369 aa10.94□□□□□ -0.66
LDLR-212ENST00000560467 PRSS58Q8IYP2 241 aa10.94□□□□□ -0.66
LDLR-212ENST00000560467 VWA5B2Q8N398 1253 aa10.94□□□□□ -0.66
LDLR-212ENST00000560467 BCORP1Q8N888 145 aa10.94□□□□□ -0.66
LDLR-212ENST00000560467 OR52N2Q8NGI0 321 aa10.94□□□□□ -0.66
LDLR-212ENST00000560467 OR9A2Q8NGT5 310 aa10.94□□□□□ -0.66
LDLR-212ENST00000560467 TMEM125Q96AQ2 219 aa10.94□□□□□ -0.66
LDLR-212ENST00000560467 NACC2Q96BF6 587 aa10.94□□□□□ -0.66
LDLR-212ENST00000560467 ANKRD9Q96BM1 317 aaPredicted RBP10.94□□□□□ -0.66
LDLR-212ENST00000560467 CCDC124Q96CT7 223 aaKnown RBP10.94□□□□□ -0.66
LDLR-212ENST00000560467 ELP4Q96EB1 424 aa10.94□□□□□ -0.66
LDLR-212ENST00000560467 ZNF681Q96N22 645 aa10.94□□□□□ -0.66
LDLR-212ENST00000560467 SLC26A1Q9H2B4 701 aa10.94□□□□□ -0.66
LDLR-212ENST00000560467 PNO1Q9NRX1 252 aaKnown RBP10.94□□□□□ -0.66
LDLR-212ENST00000560467 EXD2Q9NVH0 621 aa10.94□□□□□ -0.66
LDLR-212ENST00000560467 SLAMF8Q9P0V8 285 aa10.94□□□□□ -0.66
LDLR-212ENST00000560467 COPS7AQ9UBW8 275 aa10.94□□□□□ -0.66
LDLR-212ENST00000560467 RRP15Q9Y3B9 282 aaKnown RBP10.94□□□□□ -0.66
LDLR-212ENST00000560467 MTORP42345 2549 aa10.94□□□□□ -0.66
LDLR-212ENST00000560467 CSMD2Q7Z408 3487 aa10.93□□□□□ -0.66
LDLR-212ENST00000560467 IGLV3-12A0A075B6K2 115 aa10.93□□□□□ -0.66
LDLR-212ENST00000560467 A0A087WV62 115 aa10.93□□□□□ -0.66
LDLR-212ENST00000560467 A0A1B0GUH1 482 aa10.93□□□□□ -0.66
LDLR-212ENST00000560467 ELOVL7A1L3X0 281 aa10.93□□□□□ -0.66
LDLR-212ENST00000560467 WASHC1A8K0Z3 465 aa10.93□□□□□ -0.66
LDLR-212ENST00000560467 ANKRD65E5RJM6 399 aa10.93□□□□□ -0.66
LDLR-212ENST00000560467 FXYD1O00168 92 aa10.93□□□□□ -0.66
LDLR-212ENST00000560467 JRKO75564 520 aa10.93□□□□□ -0.66
LDLR-212ENST00000560467 PDE5AO76074 875 aa10.93□□□□□ -0.66
LDLR-212ENST00000560467 HSD17B1P14061 328 aa10.93□□□□□ -0.66
LDLR-212ENST00000560467 GPX2P18283 190 aa10.93□□□□□ -0.66
LDLR-212ENST00000560467 MAOAP21397 527 aa10.93□□□□□ -0.66
LDLR-212ENST00000560467 KHKP50053 298 aa10.93□□□□□ -0.66
LDLR-212ENST00000560467 TDGF1P3P51864 188 aa10.93□□□□□ -0.66
LDLR-212ENST00000560467 RIPPLY3P57055 190 aa10.93□□□□□ -0.66
LDLR-212ENST00000560467 CORO7P57737 925 aa10.93□□□□□ -0.66
LDLR-212ENST00000560467 BTG2P78543 158 aa10.93□□□□□ -0.66
LDLR-212ENST00000560467 MAP4K2Q12851 820 aa10.93□□□□□ -0.66
LDLR-212ENST00000560467 TRIM25Q14258 630 aaKnown RBP10.93□□□□□ -0.66
LDLR-212ENST00000560467 ZNF267Q14586 743 aaPredicted RBP10.93□□□□□ -0.66
LDLR-212ENST00000560467 ELAVL1Q15717 326 aaKnown RBP10.93□□□□□ -0.66
LDLR-212ENST00000560467 SPRED3Q2MJR0 410 aa10.93□□□□□ -0.66
LDLR-212ENST00000560467 VWA2Q5GFL6 755 aa10.93□□□□□ -0.66
LDLR-212ENST00000560467 PIGGQ5H8A4 983 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms