RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 TMEM200AQ86VY9 491 aa12.86□□□□□ -0.35
TPM1-223ENST00000560445 IFNEQ86WN2 208 aa12.86□□□□□ -0.35
TPM1-223ENST00000560445 OR9A2Q8NGT5 310 aa12.86□□□□□ -0.35
TPM1-223ENST00000560445 ZFP28Q8NHY6 868 aa12.86□□□□□ -0.35
TPM1-223ENST00000560445 CDC26Q8NHZ8 85 aa12.86□□□□□ -0.35
TPM1-223ENST00000560445 ZPLD1Q8TCW7 415 aa12.86□□□□□ -0.35
TPM1-223ENST00000560445 MZB1Q8WU39 189 aa12.86□□□□□ -0.35
TPM1-223ENST00000560445 TMBIM1Q969X1 311 aa12.86□□□□□ -0.35
TPM1-223ENST00000560445 APIPQ96GX9 242 aa12.86□□□□□ -0.35
TPM1-223ENST00000560445 VSTM2LQ96N03 204 aa12.86□□□□□ -0.35
TPM1-223ENST00000560445 TM9SF2Q99805 663 aa12.86□□□□□ -0.35
TPM1-223ENST00000560445 OR2B2Q9GZK3 357 aa12.86□□□□□ -0.35
TPM1-223ENST00000560445 L2HGDHQ9H9P8 463 aa12.86□□□□□ -0.35
TPM1-223ENST00000560445 DDX18Q9NVP1 670 aaKnown RBP12.86□□□□□ -0.35
TPM1-223ENST00000560445 TNFRSF10DQ9UBN6 386 aa12.86□□□□□ -0.35
TPM1-223ENST00000560445 HEY2Q9UBP5 337 aa12.86□□□□□ -0.35
TPM1-223ENST00000560445 ABCG2Q9UNQ0 655 aa12.86□□□□□ -0.35
TPM1-223ENST00000560445 MRPS18CQ9Y3D5 142 aaKnown RBP12.86□□□□□ -0.35
TPM1-223ENST00000560445 TIMM22Q9Y584 194 aa12.86□□□□□ -0.35
TPM1-223ENST00000560445 WIF1Q9Y5W5 379 aa12.86□□□□□ -0.35
TPM1-223ENST00000560445 G3V2L1 256 aa12.85□□□□□ -0.35
TPM1-223ENST00000560445 PLIN3O60664 434 aa12.85□□□□□ -0.35
TPM1-223ENST00000560445 GOSR1O95249 250 aa12.85□□□□□ -0.35
TPM1-223ENST00000560445 IL18BPO95998 194 aa12.85□□□□□ -0.35
TPM1-223ENST00000560445 CPN1P15169 458 aa12.85□□□□□ -0.35
TPM1-223ENST00000560445 KRT4P19013 534 aa12.85□□□□□ -0.35
TPM1-223ENST00000560445 CHMP24386 653 aa12.85□□□□□ -0.35
TPM1-223ENST00000560445 SRD5A2P31213 254 aa12.85□□□□□ -0.35
TPM1-223ENST00000560445 CEACAM8P31997 349 aaPredicted RBP12.85□□□□□ -0.35
TPM1-223ENST00000560445 ADH7P40394 386 aa12.85□□□□□ -0.35
TPM1-223ENST00000560445 KIR2DL3P43628 341 aa12.85□□□□□ -0.35
TPM1-223ENST00000560445 HTR6P50406 440 aa12.85□□□□□ -0.35
TPM1-223ENST00000560445 NCBP2P52298 156 aaKnown RBP eCLIP12.85□□□□□ -0.35
TPM1-223ENST00000560445 RAE1P78406 368 aaKnown RBP12.85□□□□□ -0.35
TPM1-223ENST00000560445 BTKQ06187 659 aa12.85□□□□□ -0.35
TPM1-223ENST00000560445 GANABQ14697 944 aaKnown RBP12.85□□□□□ -0.35
TPM1-223ENST00000560445 DECR1Q16698 335 aa12.85□□□□□ -0.35
TPM1-223ENST00000560445 VPS26BQ4G0F5 336 aa12.85□□□□□ -0.35
TPM1-223ENST00000560445 BICRALQ6AI39 1079 aa12.85□□□□□ -0.35
TPM1-223ENST00000560445 LARP4Q71RC2 724 aaKnown RBP eCLIP12.85□□□□□ -0.35
TPM1-223ENST00000560445 PLCZ1Q86YW0 608 aa12.85□□□□□ -0.35
TPM1-223ENST00000560445 GSPT2Q8IYD1 628 aaKnown RBP12.85□□□□□ -0.35
TPM1-223ENST00000560445 MMP21Q8N119 569 aa12.85□□□□□ -0.35
TPM1-223ENST00000560445 FAM83FQ8NEG4 500 aaPredicted RBP12.85□□□□□ -0.35
TPM1-223ENST00000560445 RNASE6Q93091 150 aaKnown RBP12.85□□□□□ -0.35
TPM1-223ENST00000560445 C11orf24Q96F05 449 aaPredicted RBP12.85□□□□□ -0.35
TPM1-223ENST00000560445 ZNF764Q96H86 408 aaPredicted RBP12.85□□□□□ -0.35
TPM1-223ENST00000560445 EBPLQ9BY08 206 aa12.85□□□□□ -0.35
TPM1-223ENST00000560445 UGT2B28Q9BY64 529 aa12.85□□□□□ -0.35
TPM1-223ENST00000560445 FOLH1BQ9HBA9 442 aa12.85□□□□□ -0.35
TPM1-223ENST00000560445 EML4Q9HC35 981 aaKnown RBP12.85□□□□□ -0.35
TPM1-223ENST00000560445 Q9N2J8 555 aa12.85□□□□□ -0.35
TPM1-223ENST00000560445 OXSMQ9NWU1 459 aa12.85□□□□□ -0.35
TPM1-223ENST00000560445 DKKL1Q9UK85 242 aa12.85□□□□□ -0.35
TPM1-223ENST00000560445 DTX4Q9Y2E6 619 aa12.85□□□□□ -0.35
TPM1-223ENST00000560445 TMED5Q9Y3A6 229 aa12.85□□□□□ -0.35
TPM1-223ENST00000560445 MBD3L4A6NDZ8 208 aaPredicted RBP12.84□□□□□ -0.35
TPM1-223ENST00000560445 MBD3L3A6NE82 208 aaPredicted RBP12.84□□□□□ -0.35
TPM1-223ENST00000560445 MBD3L5A6NJ08 208 aaPredicted RBP12.84□□□□□ -0.35
TPM1-223ENST00000560445 SMIM23A6NLE4 172 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 MYO1GB0I1T2 1018 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 H0Y3Z8 333 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 LINC01387J3KSC0 135 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 SYT5O00445 386 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 UGT2B11O75310 529 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 CD1EP15812 388 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 CHN1P15882 459 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 BMP7P18075 431 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 BMP5P22003 454 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 PRPH2P23942 346 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 CTSSP25774 331 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 UQCRC1P31930 480 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 SLCO1A2P46721 670 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 EEFSECP57772 596 aaKnown RBP12.84□□□□□ -0.35
TPM1-223ENST00000560445 WIPI1Q5MNZ9 446 aaPredicted RBP12.84□□□□□ -0.35
TPM1-223ENST00000560445 FNDC7Q5VTL7 733 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 RNF165Q6ZSG1 346 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 CHMP1BQ7LBR1 199 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 OR4K17Q8NGC6 315 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 GOT1L1Q8NHS2 421 aaPredicted RBP12.84□□□□□ -0.35
TPM1-223ENST00000560445 MBD3L2Q8NHZ7 208 aaPredicted RBP12.84□□□□□ -0.35
TPM1-223ENST00000560445 FAM222BQ8WU58 562 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 KAT2AQ92830 837 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 NTNG2Q96CW9 530 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 KCNA7Q96RP8 456 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 TRIB1Q96RU8 372 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 ADOQ96SZ5 270 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 CCT7Q99832 543 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 EPB41L4BQ9H329 900 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 PTGES2Q9H7Z7 377 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 SERHLQ9NQF3 203 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 C1orf109Q9NX04 203 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 MKS1Q9NXB0 559 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 TAS2R10Q9NYW0 307 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 STOML1Q9UBI4 398 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 EMCNQ9ULC0 261 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 MAPRE3Q9UPY8 281 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 TACC2O95359 2948 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 DCHS2Q6V1P9 2916 aa12.84□□□□□ -0.35
TPM1-223ENST00000560445 A0A1W2PPM1 405 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms