RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 C16orf47Q6ZP98 133 aaPredicted RBP4.85□□□□□ -1.63
SPG11-220ENST00000559933 QSOX2Q6ZRP7 698 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 ZNF621Q6ZSS3 439 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 ASRGL1Q7L266 308 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 GPR155Q7Z3F1 870 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 RNF130Q86XS8 419 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 HPS6Q86YV9 775 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 ZNF595Q8IYB9 648 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 NLGN4XQ8N0W4 816 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 GALNT15Q8N3T1 639 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 HORMAD2Q8N7B1 307 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 NLGN4YQ8NFZ3 816 aaPredicted RBP4.85□□□□□ -1.63
SPG11-220ENST00000559933 OR10A6Q8NH74 314 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 FAM110BQ8TC76 370 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 ZFP90Q8TF47 636 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 PTPMT1Q8WUK0 201 aaPredicted RBP4.85□□□□□ -1.63
SPG11-220ENST00000559933 OR5P2Q8WZ92 322 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 TANKQ92844 425 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 MAL2Q969L2 176 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 TMEM125Q96AQ2 219 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 CCDC124Q96CT7 223 aaKnown RBP4.85□□□□□ -1.63
SPG11-220ENST00000559933 LRRC58Q96CX6 371 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 MTERF3Q96E29 417 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 ARSGQ96EG1 525 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 GIMAP5Q96F15 307 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 ZBED6CLQ96FA7 236 aaPredicted RBP4.85□□□□□ -1.63
SPG11-220ENST00000559933 ITCHQ96J02 903 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 SLC35G5Q96KT7 338 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 LRFN5Q96NI6 719 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 DGAT2Q96PD7 388 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 OR1F2PQ96R84 312 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 WDR77Q9BQA1 342 aaPredicted RBP4.85□□□□□ -1.63
SPG11-220ENST00000559933 GPATCH1Q9BRR8 931 aaKnown RBP4.85□□□□□ -1.63
SPG11-220ENST00000559933 CADM1Q9BY67 442 aaKnown RBP4.85□□□□□ -1.63
SPG11-220ENST00000559933 ALOXE3Q9BYJ1 711 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 OR8D2Q9GZM6 311 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 EPS8L2Q9H6S3 715 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 NANOGQ9H9S0 305 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 ZCCHC3Q9NUD5 404 aaKnown RBP4.85□□□□□ -1.63
SPG11-220ENST00000559933 ATAD3AQ9NVI7 634 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 C14orf105Q9NVL8 296 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 MS4A12Q9NXJ0 267 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 ADA2Q9NZK5 511 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 EHD3Q9NZN3 535 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 BTNL2Q9UIR0 455 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 VPS4AQ9UN37 437 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 CDC14AQ9UNH5 594 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 ERVK-19Q9WJR5 959 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 MAN2B2Q9Y2E5 1009 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 PCDHGA8Q9Y5G5 932 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.85□□□□□ -1.63
SPG11-220ENST00000559933 SEC16AO15027 2179 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 AHCTF1Q8WYP5 2266 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 MAST4O15021 2626 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 LAMA5O15230 3695 aa4.85□□□□□ -1.63
SPG11-220ENST00000559933 NCOR2Q9Y618 2525 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 NPIPA5A0A0B4J1W7 369 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 CENPVL1A0A0U1RR11 272 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 GXYLT2A0PJZ3 443 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 C17orf51A8MQB3 221 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 NPIPA7E9PJI5 369 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 CLDN4O14493 209 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 SOCS6O14544 535 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 GYG2O15488 501 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 ATP1B1P05026 303 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 KRT16P08779 473 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 SLC35E2P0CK97 266 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 NPIPA8P0DM63 369 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 PRKAR1AP10644 381 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 CDK4P11802 303 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 NCK1P16333 377 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 TNNI3P19429 210 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 S1PR1P21453 382 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 UQCRC2P22695 453 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 ADSLP30566 484 aaPredicted RBP4.84□□□□□ -1.63
SPG11-220ENST00000559933 TRHRP34981 398 aaPredicted RBP4.84□□□□□ -1.63
SPG11-220ENST00000559933 CHI3L1P36222 383 aaPredicted RBP4.84□□□□□ -1.63
SPG11-220ENST00000559933 RPL3P39023 403 aaKnown RBP4.84□□□□□ -1.63
SPG11-220ENST00000559933 CRATP43155 626 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 ID4P47928 161 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 CCT3P49368 545 aaKnown RBP4.84□□□□□ -1.63
SPG11-220ENST00000559933 EMP2P54851 167 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 HSD17B7P56937 341 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 PCBP3P57721 371 aaKnown RBP4.84□□□□□ -1.63
SPG11-220ENST00000559933 CORO7P57737 925 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 SKP1P63208 163 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 LIPEQ05469 1076 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 CHAF1BQ13112 559 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 STX5Q13190 355 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 ATP1A4Q13733 1029 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 PCOLCEQ15113 449 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 DPY19L1Q2PZI1 675 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 KRTAP19-4Q3LI73 84 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 RUNDC3AQ59EK9 446 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 ANXA8L1Q5VT79 327 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 SAXO2Q658L1 398 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 CPZQ66K79 652 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 FCRLBQ6BAA4 426 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 NIPAL1Q6NVV3 410 aa4.84□□□□□ -1.63
SPG11-220ENST00000559933 CYB5D1Q6P9G0 228 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms