RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 ARHGAP11AQ6P4F7 1023 aa13.59□□□□□ -0.23
RABGGTA-211ENST00000559850 TRILQ7L0X0 811 aa13.59□□□□□ -0.23
RABGGTA-211ENST00000559850 MAMDC2Q7Z304 686 aaPredicted RBP13.59□□□□□ -0.23
RABGGTA-211ENST00000559850 NUP54Q7Z3B4 507 aa13.59□□□□□ -0.23
RABGGTA-211ENST00000559850 SZRD1Q7Z422 152 aa13.59□□□□□ -0.23
RABGGTA-211ENST00000559850 RPRMLQ8N4K4 120 aa13.59□□□□□ -0.23
RABGGTA-211ENST00000559850 FBXO30Q8TB52 745 aa13.59□□□□□ -0.23
RABGGTA-211ENST00000559850 ITLN2Q8WWU7 325 aaPredicted RBP13.59□□□□□ -0.23
RABGGTA-211ENST00000559850 ERP27Q96DN0 273 aa13.59□□□□□ -0.23
RABGGTA-211ENST00000559850 OTUB1Q96FW1 271 aaPredicted RBP13.59□□□□□ -0.23
RABGGTA-211ENST00000559850 ZNF597Q96LX8 424 aa13.59□□□□□ -0.23
RABGGTA-211ENST00000559850 ANGPTL4Q9BY76 406 aa13.59□□□□□ -0.23
RABGGTA-211ENST00000559850 LDAHQ9H6V9 325 aa13.59□□□□□ -0.23
RABGGTA-211ENST00000559850 EXO5Q9H790 373 aa13.59□□□□□ -0.23
RABGGTA-211ENST00000559850 PNPLA3Q9NST1 481 aa13.59□□□□□ -0.23
RABGGTA-211ENST00000559850 TAS2R9Q9NYW1 312 aa13.59□□□□□ -0.23
RABGGTA-211ENST00000559850 FLRT3Q9NZU0 649 aa13.59□□□□□ -0.23
RABGGTA-211ENST00000559850 SPRR3Q9UBC9 169 aa13.59□□□□□ -0.23
RABGGTA-211ENST00000559850 SPTAN1Q13813 2472 aaKnown RBP13.58□□□□□ -0.23
RABGGTA-211ENST00000559850 A0A087WV62 115 aa13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 PLOD2O00469 737 aa13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 SCAMP2O15127 329 aaKnown RBP13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 TSPAN2O60636 221 aa13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 TBX19O60806 448 aa13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 COQ9O75208 318 aa13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 TRAPPC6AO75865 159 aa13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 PSMG1O95456 288 aa13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 LAMP1P11279 417 aa13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 G6PDP11413 515 aa13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 NAGAP17050 411 aa13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 GRK2P25098 689 aa13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 MAPK1P28482 360 aa13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 RFX3P48380 749 aa13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 MAN2A2P49641 1150 aa13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 RPL14P50914 215 aaKnown RBP13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 MANFP55145 182 aaKnown RBP13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 PSG6Q00889 435 aa13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 SLC10A1Q14973 349 aa13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 TOMM20Q15388 145 aa13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 CDSNQ15517 529 aa13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 EMC4Q5J8M3 183 aa13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 ANGPTL8Q6UXH0 198 aa13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 MRGPRGQ86SM5 289 aa13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 OR2L13Q8N349 312 aa13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 COL21A1Q96P44 957 aa13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 GNRHR2Q96P88 292 aa13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 NUF2Q9BZD4 464 aa13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 AKTIPQ9H8T0 292 aa13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 KLRF1Q9NZS2 232 aa13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 MARCOQ9UEW3 520 aaPredicted RBP13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 ATP6V1HQ9UI12 483 aa13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 MAPRE3Q9UPY8 281 aa13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 OR10H1Q9Y4A9 318 aa13.58□□□□□ -0.24
RABGGTA-211ENST00000559850 DOPEY1Q5JWR5 2465 aa13.57□□□□□ -0.24
RABGGTA-211ENST00000559850 TRGV5A0A0B4J1U4 118 aa13.57□□□□□ -0.24
RABGGTA-211ENST00000559850 GXYLT2A0PJZ3 443 aa13.57□□□□□ -0.24
RABGGTA-211ENST00000559850 ANKRD33BA6NCL7 494 aa13.57□□□□□ -0.24
RABGGTA-211ENST00000559850 PRAMEF25A6NGN4 478 aa13.57□□□□□ -0.24
RABGGTA-211ENST00000559850 ICOSLGO75144 302 aa13.57□□□□□ -0.24
RABGGTA-211ENST00000559850 IGHG3P01860 377 aa13.57□□□□□ -0.24
RABGGTA-211ENST00000559850 IL12BP29460 328 aa13.57□□□□□ -0.24
RABGGTA-211ENST00000559850 RPP38P78345 283 aaKnown RBP13.57□□□□□ -0.24
RABGGTA-211ENST00000559850 GAB1Q13480 694 aa13.57□□□□□ -0.24
RABGGTA-211ENST00000559850 TBCELQ5QJ74 424 aa13.57□□□□□ -0.24
RABGGTA-211ENST00000559850 ZNF585AQ6P3V2 769 aa13.57□□□□□ -0.24
RABGGTA-211ENST00000559850 PAOXQ6QHF9 649 aa13.57□□□□□ -0.24
RABGGTA-211ENST00000559850 LARP4Q71RC2 724 aaKnown RBP eCLIP13.57□□□□□ -0.24
RABGGTA-211ENST00000559850 GALNT10Q86SR1 603 aa13.57□□□□□ -0.24
RABGGTA-211ENST00000559850 MARVELD2Q8N4S9 558 aa13.57□□□□□ -0.24
RABGGTA-211ENST00000559850 NUP43Q8NFH3 380 aa13.57□□□□□ -0.24
RABGGTA-211ENST00000559850 ZFP28Q8NHY6 868 aa13.57□□□□□ -0.24
RABGGTA-211ENST00000559850 PIK3R3Q92569 461 aa13.57□□□□□ -0.24
RABGGTA-211ENST00000559850 SLC35A4Q96G79 324 aa13.57□□□□□ -0.24
RABGGTA-211ENST00000559850 SECISBP2Q96T21 854 aaKnown RBP13.57□□□□□ -0.24
RABGGTA-211ENST00000559850 YIPF4Q9BSR8 244 aa13.57□□□□□ -0.24
RABGGTA-211ENST00000559850 OSBPL11Q9BXB4 747 aa13.57□□□□□ -0.24
RABGGTA-211ENST00000559850 NKIRAS1Q9NYS0 192 aa13.57□□□□□ -0.24
RABGGTA-211ENST00000559850 EIF3LQ9Y262 564 aaKnown RBP13.57□□□□□ -0.24
RABGGTA-211ENST00000559850 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.57□□□□□ -0.24
RABGGTA-211ENST00000559850 C15orf41Q9Y2V0 281 aa13.57□□□□□ -0.24
RABGGTA-211ENST00000559850 PHF3Q92576 2039 aaKnown RBP13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 SPTBN1Q01082 2364 aaKnown RBP13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 OR6C70A6NIJ9 312 aa13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 SLITRK5O94991 958 aa13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 SNX4O95219 450 aa13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 KITP10721 976 aa13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 PRPS2P11908 318 aa13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 CYP4B1P13584 511 aa13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 GRNP28799 593 aaKnown RBP13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 GABRA3P34903 492 aa13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 KRT20P35900 424 aa13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 FRKP42685 505 aaPredicted RBP13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 DIO3P55073 304 aa13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 EMX2Q04743 252 aa13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 GXYLT1Q4G148 440 aa13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 EIPR1Q53HC9 387 aa13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 CPTPQ5TA50 214 aa13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 ZNF787Q6DD87 383 aa13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 OR5M10Q6IEU7 315 aa13.56□□□□□ -0.24
RABGGTA-211ENST00000559850 R3HCC1LQ7Z5L2 792 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms