RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 NTN4Q9HB63 628 aa15.4■□□□□ 0.06
TPM1-219ENST00000559397 ZCCHC3Q9NUD5 404 aaKnown RBP15.4■□□□□ 0.06
TPM1-219ENST00000559397 ZNF639Q9UID6 485 aa15.4■□□□□ 0.06
TPM1-219ENST00000559397 LRCH1Q9Y2L9 728 aa15.4■□□□□ 0.06
TPM1-219ENST00000559397 HS3ST3B1Q9Y662 390 aa15.4■□□□□ 0.06
TPM1-219ENST00000559397 LOC102723996A0A087X1L8 192 aa15.39■□□□□ 0.05
TPM1-219ENST00000559397 SYNDIG1LA6NDD5 238 aa15.39■□□□□ 0.05
TPM1-219ENST00000559397 HMGN4O00479 90 aa15.39■□□□□ 0.05
TPM1-219ENST00000559397 SOCS6O14544 535 aa15.39■□□□□ 0.05
TPM1-219ENST00000559397 ACOX3O15254 700 aa15.39■□□□□ 0.05
TPM1-219ENST00000559397 EMC8O43402 210 aa15.39■□□□□ 0.05
TPM1-219ENST00000559397 ZNF682O95780 498 aa15.39■□□□□ 0.05
TPM1-219ENST00000559397 TFPTP0C1Z6 253 aa15.39■□□□□ 0.05
TPM1-219ENST00000559397 WT1P19544 449 aaPredicted RBP15.39■□□□□ 0.05
TPM1-219ENST00000559397 RPS26P62854 115 aaKnown RBP15.39■□□□□ 0.05
TPM1-219ENST00000559397 TP53BP2Q13625 1128 aa15.39■□□□□ 0.05
TPM1-219ENST00000559397 CRB2Q5IJ48 1285 aa15.39■□□□□ 0.05
TPM1-219ENST00000559397 TNFAIP8L2Q6P589 184 aaPredicted RBP15.39■□□□□ 0.05
TPM1-219ENST00000559397 PPP1R32Q7Z5V6 425 aa15.39■□□□□ 0.05
TPM1-219ENST00000559397 GALNT10Q86SR1 603 aa15.39■□□□□ 0.05
TPM1-219ENST00000559397 PACRGLQ8N7B6 248 aa15.39■□□□□ 0.05
TPM1-219ENST00000559397 ADAMTS17Q8TE56 1095 aa15.39■□□□□ 0.05
TPM1-219ENST00000559397 SLC35G5Q96KT7 338 aa15.39■□□□□ 0.05
TPM1-219ENST00000559397 DGAT2Q96PD7 388 aa15.39■□□□□ 0.05
TPM1-219ENST00000559397 SLC29A1Q99808 456 aa15.39■□□□□ 0.05
TPM1-219ENST00000559397 VCXQ9H320 206 aa15.39■□□□□ 0.05
TPM1-219ENST00000559397 C8orf4Q9NR00 106 aa15.39■□□□□ 0.05
TPM1-219ENST00000559397 THUMPD1Q9NXG2 353 aaKnown RBP15.39■□□□□ 0.05
TPM1-219ENST00000559397 DNAJB9Q9UBS3 223 aa15.39■□□□□ 0.05
TPM1-219ENST00000559397 SSUH2Q9Y2M2 353 aa15.39■□□□□ 0.05
TPM1-219ENST00000559397 A0A1W2PQ72 361 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 PLOD2O00469 737 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 PCDH17O14917 1159 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 ATP1B1P05026 303 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 IFI6P09912 130 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 GALNSP34059 522 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 PTGER1P34995 402 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 SOX18P35713 384 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 TXNL4AP83876 142 aaKnown RBP15.38■□□□□ 0.05
TPM1-219ENST00000559397 PRR5P85299 388 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 MAPK11Q15759 364 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 CYBRD1Q53TN4 286 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 TMEM107Q6UX40 140 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 ZBTB49Q6ZSB9 765 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 CPEB2Q7Z5Q1 589 aaKnown RBP15.38■□□□□ 0.05
TPM1-219ENST00000559397 METTL25Q8N6Q8 603 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 SLC38A5Q8WUX1 472 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 NACC2Q96BF6 587 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 C8orf44Q96CB5 159 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 ZNF597Q96LX8 424 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 WDR77Q9BQA1 342 aaPredicted RBP15.38■□□□□ 0.05
TPM1-219ENST00000559397 C9orf16Q9BUW7 83 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 C3orf14Q9HBI5 128 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 ADAP2Q9NPF8 381 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 IL1RAPQ9NPH3 570 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 C19orf25Q9UFG5 118 aaPredicted RBP15.38■□□□□ 0.05
TPM1-219ENST00000559397 ANGPT4Q9Y264 503 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 ZNF451Q9Y4E5 1061 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 PCSK5Q92824 1860 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 DMXL2Q8TDJ6 3036 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 IGHV3-20A0A0C4DH32 117 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 SAC3D1A6NKF1 404 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 C1QTNF9BB2RNN3 333 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 KLK10O43240 276 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 C1QTNF9P0C862 333 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 AQP1P29972 269 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 OTX2P32243 289 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 EIF2S3P41091 472 aaKnown RBP15.38■□□□□ 0.05
TPM1-219ENST00000559397 MC3RP41968 323 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 MGAT2Q10469 447 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 ELAVL1Q15717 326 aaKnown RBP15.38■□□□□ 0.05
TPM1-219ENST00000559397 LTB4RQ15722 352 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 REEP3Q6NUK4 255 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 KIRREL2Q6UWL6 708 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 PIWIL3Q7Z3Z3 882 aaKnown RBP15.38■□□□□ 0.05
TPM1-219ENST00000559397 OR10Q1Q8NGQ4 319 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 TAMM41Q96BW9 452 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 RBM18Q96H35 190 aaKnown RBP15.38■□□□□ 0.05
TPM1-219ENST00000559397 HSH2DQ96JZ2 352 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 PELOQ9BRX2 385 aaKnown RBP15.38■□□□□ 0.05
TPM1-219ENST00000559397 OR51I1Q9H343 314 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 PNO1Q9NRX1 252 aaKnown RBP15.38■□□□□ 0.05
TPM1-219ENST00000559397 WDR70Q9NW82 654 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 ADPRHL2Q9NX46 363 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 OAZ3Q9UMX2 235 aa15.38■□□□□ 0.05
TPM1-219ENST00000559397 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.37■□□□□ 0.05
TPM1-219ENST00000559397 SOCS2O14508 198 aa15.37■□□□□ 0.05
TPM1-219ENST00000559397 EFSO43281 561 aa15.37■□□□□ 0.05
TPM1-219ENST00000559397 SUV39H1O43463 412 aa15.37■□□□□ 0.05
TPM1-219ENST00000559397 OR10H2O60403 315 aa15.37■□□□□ 0.05
TPM1-219ENST00000559397 IFNA16P05015 189 aa15.37■□□□□ 0.05
TPM1-219ENST00000559397 CT62P0C5K7 136 aa15.37■□□□□ 0.05
TPM1-219ENST00000559397 UQCRBP14927 111 aa15.37■□□□□ 0.05
TPM1-219ENST00000559397 NT5EP21589 574 aa15.37■□□□□ 0.05
TPM1-219ENST00000559397 MATN1P21941 496 aa15.37■□□□□ 0.05
TPM1-219ENST00000559397 HSPA13P48723 471 aa15.37■□□□□ 0.05
TPM1-219ENST00000559397 KHKP50053 298 aa15.37■□□□□ 0.05
TPM1-219ENST00000559397 ANXA11P50995 505 aaKnown RBP15.37■□□□□ 0.05
TPM1-219ENST00000559397 SELENOWP63302 87 aa15.37■□□□□ 0.05
TPM1-219ENST00000559397 PCOLCEQ15113 449 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms