RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 SERHL2Q9H4I8 314 aa19.99■□□□□ 0.79
SNX1-206ENST00000559389 LEF1Q9UJU2 399 aaPredicted RBP19.99■□□□□ 0.79
SNX1-206ENST00000559389 FAF1Q9UNN5 650 aaPredicted RBP19.99■□□□□ 0.79
SNX1-206ENST00000559389 B3GNT3Q9Y2A9 372 aa19.99■□□□□ 0.79
SNX1-206ENST00000559389 NPFFR2Q9Y5X5 522 aa19.99■□□□□ 0.79
SNX1-206ENST00000559389 A0A096LPI6 279 aa19.98■□□□□ 0.79
SNX1-206ENST00000559389 TRAV17A0A0B4J275 112 aa19.98■□□□□ 0.79
SNX1-206ENST00000559389 GSNP06396 782 aa19.98■□□□□ 0.79
SNX1-206ENST00000559389 NAGAP17050 411 aa19.98■□□□□ 0.79
SNX1-206ENST00000559389 ZNF169Q14929 603 aaPredicted RBP19.98■□□□□ 0.79
SNX1-206ENST00000559389 MAPRE2Q15555 327 aa19.98■□□□□ 0.79
SNX1-206ENST00000559389 NTRK2Q16620 822 aa19.98■□□□□ 0.79
SNX1-206ENST00000559389 DUSP5Q16690 384 aa19.98■□□□□ 0.79
SNX1-206ENST00000559389 LRIF1Q5T3J3 769 aa19.98■□□□□ 0.79
SNX1-206ENST00000559389 IL20RBQ6UXL0 311 aa19.98■□□□□ 0.79
SNX1-206ENST00000559389 RTL4Q6ZR62 310 aa19.98■□□□□ 0.79
SNX1-206ENST00000559389 ZNF621Q6ZSS3 439 aa19.98■□□□□ 0.79
SNX1-206ENST00000559389 C6orf120Q7Z4R8 191 aa19.98■□□□□ 0.79
SNX1-206ENST00000559389 MTDHQ86UE4 582 aaKnown RBP19.98■□□□□ 0.79
SNX1-206ENST00000559389 HORMAD2Q8N7B1 307 aa19.98■□□□□ 0.79
SNX1-206ENST00000559389 GOLM1Q8NBJ4 401 aa19.98■□□□□ 0.79
SNX1-206ENST00000559389 SLC16A11Q8NCK7 471 aa19.98■□□□□ 0.79
SNX1-206ENST00000559389 SLC39A7Q92504 469 aa19.98■□□□□ 0.79
SNX1-206ENST00000559389 SLC9A6Q92581 669 aa19.98■□□□□ 0.79
SNX1-206ENST00000559389 JADE3Q92613 823 aa19.98■□□□□ 0.79
SNX1-206ENST00000559389 PNPLA2Q96AD5 504 aa19.98■□□□□ 0.79
SNX1-206ENST00000559389 STACQ99469 402 aa19.98■□□□□ 0.79
SNX1-206ENST00000559389 YIPF4Q9BSR8 244 aa19.98■□□□□ 0.79
SNX1-206ENST00000559389 MFRPQ9BY79 579 aa19.98■□□□□ 0.79
SNX1-206ENST00000559389 OR10H1Q9Y4A9 318 aa19.98■□□□□ 0.79
SNX1-206ENST00000559389 ANGPT2O15123 496 aa19.97■□□□□ 0.79
SNX1-206ENST00000559389 PPM1BO75688 479 aa19.97■□□□□ 0.79
SNX1-206ENST00000559389 SLC25A12O75746 678 aa19.97■□□□□ 0.79
SNX1-206ENST00000559389 ANP32DO95626 131 aa19.97■□□□□ 0.79
SNX1-206ENST00000559389 ALOX5P09917 674 aa19.97■□□□□ 0.79
SNX1-206ENST00000559389 CHI3L1P36222 383 aaPredicted RBP19.97■□□□□ 0.79
SNX1-206ENST00000559389 MAN2A2P49641 1150 aa19.97■□□□□ 0.79
SNX1-206ENST00000559389 RPS26P62854 115 aaKnown RBP19.97■□□□□ 0.79
SNX1-206ENST00000559389 KLRB1Q12918 225 aa19.97■□□□□ 0.79
SNX1-206ENST00000559389 CYP27C1Q4G0S4 372 aa19.97■□□□□ 0.79
SNX1-206ENST00000559389 GKAP1Q5VSY0 366 aaPredicted RBP19.97■□□□□ 0.79
SNX1-206ENST00000559389 SPINK14Q6IE38 97 aa19.97■□□□□ 0.79
SNX1-206ENST00000559389 RETREG3Q86VR2 466 aa19.97■□□□□ 0.79
SNX1-206ENST00000559389 OR4N2Q8NGD1 307 aa19.97■□□□□ 0.79
SNX1-206ENST00000559389 MIPOL1Q8TD10 442 aa19.97■□□□□ 0.79
SNX1-206ENST00000559389 ZFP90Q8TF47 636 aa19.97■□□□□ 0.79
SNX1-206ENST00000559389 TMBIM1Q969X1 311 aa19.97■□□□□ 0.79
SNX1-206ENST00000559389 OTUB1Q96FW1 271 aaPredicted RBP19.97■□□□□ 0.79
SNX1-206ENST00000559389 SCMH1Q96GD3 660 aa19.97■□□□□ 0.79
SNX1-206ENST00000559389 CCDC106Q9BWC9 280 aa19.97■□□□□ 0.79
SNX1-206ENST00000559389 PIGUQ9H490 435 aa19.97■□□□□ 0.79
SNX1-206ENST00000559389 SH2D2AQ9NP31 389 aa19.97■□□□□ 0.79
SNX1-206ENST00000559389 DUSP22Q9NRW4 184 aa19.97■□□□□ 0.79
SNX1-206ENST00000559389 GIN1Q9NXP7 522 aa19.97■□□□□ 0.79
SNX1-206ENST00000559389 NDUFAF1Q9Y375 327 aa19.97■□□□□ 0.79
SNX1-206ENST00000559389 CAPN14A8MX76 684 aa19.96■□□□□ 0.79
SNX1-206ENST00000559389 C1QCP02747 245 aa19.96■□□□□ 0.79
SNX1-206ENST00000559389 GABRA3P34903 492 aa19.96■□□□□ 0.79
SNX1-206ENST00000559389 MDGA2Q7Z553 956 aa19.96■□□□□ 0.79
SNX1-206ENST00000559389 SNX32Q86XE0 403 aa19.96■□□□□ 0.79
SNX1-206ENST00000559389 DPP10Q8N608 796 aa19.96■□□□□ 0.79
SNX1-206ENST00000559389 TEX19Q8NA77 164 aa19.96■□□□□ 0.79
SNX1-206ENST00000559389 OR10G3Q8NGC4 313 aa19.96■□□□□ 0.79
SNX1-206ENST00000559389 GPR151Q8TDV0 419 aa19.96■□□□□ 0.79
SNX1-206ENST00000559389 PIK3R3Q92569 461 aa19.96■□□□□ 0.79
SNX1-206ENST00000559389 SLC35A4Q96G79 324 aa19.96■□□□□ 0.79
SNX1-206ENST00000559389 SGCZQ96LD1 299 aa19.96■□□□□ 0.79
SNX1-206ENST00000559389 C5orf34Q96MH7 638 aa19.96■□□□□ 0.79
SNX1-206ENST00000559389 HES7Q9BYE0 225 aa19.96■□□□□ 0.79
SNX1-206ENST00000559389 MAP10Q9P2G4 905 aa19.96■□□□□ 0.79
SNX1-206ENST00000559389 CBLCQ9ULV8 474 aa19.96■□□□□ 0.79
SNX1-206ENST00000559389 PCDHGB6Q9Y5F9 930 aa19.96■□□□□ 0.79
SNX1-206ENST00000559389 TRBV5-3A0A0A0MS03 114 aa19.95■□□□□ 0.78
SNX1-206ENST00000559389 GXYLT2A0PJZ3 443 aa19.95■□□□□ 0.78
SNX1-206ENST00000559389 BBIP1A8MTZ0 92 aa19.95■□□□□ 0.78
SNX1-206ENST00000559389 FBP2O00757 339 aa19.95■□□□□ 0.78
SNX1-206ENST00000559389 NME2P1O60361 137 aa19.95■□□□□ 0.78
SNX1-206ENST00000559389 TSPAN2O60636 221 aa19.95■□□□□ 0.78
SNX1-206ENST00000559389 CD46P15529 392 aa19.95■□□□□ 0.78
SNX1-206ENST00000559389 NME2P22392 152 aa19.95■□□□□ 0.78
SNX1-206ENST00000559389 PIGAP37287 484 aa19.95■□□□□ 0.78
SNX1-206ENST00000559389 KHKP50053 298 aa19.95■□□□□ 0.78
SNX1-206ENST00000559389 FBXW4P57775 412 aa19.95■□□□□ 0.78
SNX1-206ENST00000559389 MRPS22P82650 360 aaKnown RBP19.95■□□□□ 0.78
SNX1-206ENST00000559389 NFATC3Q12968 1075 aa19.95■□□□□ 0.78
SNX1-206ENST00000559389 ZNF766Q5HY98 468 aa19.95■□□□□ 0.78
SNX1-206ENST00000559389 COQ5Q5HYK3 327 aa19.95■□□□□ 0.78
SNX1-206ENST00000559389 PTRH1Q86Y79 214 aaKnown RBP19.95■□□□□ 0.78
SNX1-206ENST00000559389 MSRB3Q8IXL7 192 aa19.95■□□□□ 0.78
SNX1-206ENST00000559389 COX18Q8N8Q8 333 aa19.95■□□□□ 0.78
SNX1-206ENST00000559389 ANKS4BQ8N8V4 417 aa19.95■□□□□ 0.78
SNX1-206ENST00000559389 Q8NA96 180 aa19.95■□□□□ 0.78
SNX1-206ENST00000559389 PSD4Q8NDX1 1056 aa19.95■□□□□ 0.78
SNX1-206ENST00000559389 OR5D16Q8NGK9 328 aa19.95■□□□□ 0.78
SNX1-206ENST00000559389 HGDQ93099 445 aa19.95■□□□□ 0.78
SNX1-206ENST00000559389 TMEM125Q96AQ2 219 aa19.95■□□□□ 0.78
SNX1-206ENST00000559389 RMND5BQ96G75 393 aaPredicted RBP19.95■□□□□ 0.78
SNX1-206ENST00000559389 AURKBQ96GD4 344 aaPredicted RBP19.95■□□□□ 0.78
SNX1-206ENST00000559389 OR7D2Q96RA2 312 aa19.95■□□□□ 0.78
SNX1-206ENST00000559389 TIMMDC1Q9NPL8 285 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms