RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 KIAA0040Q15053 153 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 RFTN2Q52LD8 501 aaPredicted RBP11.43□□□□□ -0.58
SMAD3-208ENST00000558827 ZNF385BQ569K4 471 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 CT45A2Q5DJT8 189 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 TBCELQ5QJ74 424 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 DCST1Q5T197 706 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 TIGD3Q6B0B8 471 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 ACAD11Q709F0 780 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 ULK2Q8IYT8 1036 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 LILRB4Q8NHJ6 448 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.43□□□□□ -0.58
SMAD3-208ENST00000558827 ASB5Q8WWX0 329 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 VSTM2LQ96N03 204 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 COL21A1Q96P44 957 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 CENPHQ9H3R5 247 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 RUBCNLQ9H714 662 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 ZNF395Q9H8N7 513 aaPredicted RBP11.43□□□□□ -0.58
SMAD3-208ENST00000558827 ACKR4Q9NPB9 350 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 KCNJ16Q9NPI9 418 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 EQTNQ9NQ60 294 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 NPDC1Q9NQX5 325 aaPredicted RBP11.43□□□□□ -0.58
SMAD3-208ENST00000558827 C1orf109Q9NX04 203 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 SIRT5Q9NXA8 310 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 SH3BP4Q9P0V3 963 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 LGALS13Q9UHV8 139 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 OR10H1Q9Y4A9 318 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 TRAF6Q9Y4K3 522 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 FBN2P35556 2912 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 PCNX3Q9H6A9 2034 aa11.43□□□□□ -0.58
SMAD3-208ENST00000558827 NUP214P35658 2090 aaPredicted RBP11.42□□□□□ -0.58
SMAD3-208ENST00000558827 HCFC1P51610 2035 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 PIP5K1BO14986 540 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 ACOX3O15254 700 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 SCO2O43819 266 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 GMFGO60234 142 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 SKAP2O75563 359 aaPredicted RBP11.42□□□□□ -0.58
SMAD3-208ENST00000558827 LYPLA1O75608 230 aaPredicted RBP11.42□□□□□ -0.58
SMAD3-208ENST00000558827 TOXO94900 526 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 NAGAP17050 411 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 BMP7P18075 431 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 SDC1P18827 310 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 PTPN6P29350 595 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 IL12BP29460 328 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 NTSP30990 170 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 KRT20P35900 424 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 STARP49675 285 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 PRKAG1P54619 331 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 DCAF7P61962 342 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 SRYQ05066 204 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 CRYZQ08257 329 aaKnown RBP11.42□□□□□ -0.58
SMAD3-208ENST00000558827 STX5Q13190 355 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 KRT71Q3SY84 523 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 KANK2Q63ZY3 851 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 EMBQ6PCB8 327 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 SEM1Q6ZVN7 128 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 SZRD1Q7Z422 152 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 GALNT10Q86SR1 603 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 RIBC1Q8N443 379 aaPredicted RBP11.42□□□□□ -0.58
SMAD3-208ENST00000558827 WDSUB1Q8N9V3 476 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 FAM83FQ8NEG4 500 aaPredicted RBP11.42□□□□□ -0.58
SMAD3-208ENST00000558827 C17orf47Q8NEP4 570 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 FBXO30Q8TB52 745 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 TWIST2Q8WVJ9 160 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 OTUB1Q96FW1 271 aaPredicted RBP11.42□□□□□ -0.58
SMAD3-208ENST00000558827 TMEM41AQ96HV5 264 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 PPP1R36Q96LQ0 422 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 AMDHD1Q96NU7 426 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 TIMP4Q99727 224 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 UGT2B28Q9BY64 529 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 TRIM8Q9BZR9 551 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 ROPN1BQ9BZX4 212 aaPredicted RBP11.42□□□□□ -0.58
SMAD3-208ENST00000558827 UBQLN3Q9H347 655 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 ROPN1Q9HAT0 212 aaPredicted RBP11.42□□□□□ -0.58
SMAD3-208ENST00000558827 FBXL2Q9UKC9 423 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 DNAJC15Q9Y5T4 150 aa11.42□□□□□ -0.58
SMAD3-208ENST00000558827 ARHGAP21Q5T5U3 1957 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 TACC2O95359 2948 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 GXYLT2A0PJZ3 443 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 UPK1AO00322 258 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 SNPHO15079 494 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 TO15178 435 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 PLOD3O60568 738 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 TSPAN2O60636 221 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 WDR1O75083 606 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 PEX11AO75192 247 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 BCAS2O75934 225 aaPredicted RBP11.41□□□□□ -0.58
SMAD3-208ENST00000558827 CHEK2O96017 543 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 HPNP05981 417 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 CYP4B1P13584 511 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 GPC1P35052 558 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 ZFP36L2P47974 494 aaKnown RBP11.41□□□□□ -0.58
SMAD3-208ENST00000558827 NAA20P61599 178 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 GAB1Q13480 694 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 CEBPEQ15744 281 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 CES4AQ5XG92 561 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 SLC30A6Q6NXT4 461 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 WDR93Q6P2C0 686 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 GDF7Q7Z4P5 450 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 EXOC3L1Q86VI1 746 aa11.41□□□□□ -0.58
SMAD3-208ENST00000558827 SAMD14Q8IZD0 417 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms