RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 HEPHL1Q6MZM0 1159 aa15.66■□□□□ 0.1
SNX1-203ENST00000558040 CYP2R1Q6VVX0 501 aa15.66■□□□□ 0.1
SNX1-203ENST00000558040 WDR53Q7Z5U6 358 aaPredicted RBP15.66■□□□□ 0.1
SNX1-203ENST00000558040 SPATA24Q86W54 205 aa15.66■□□□□ 0.1
SNX1-203ENST00000558040 AQP12AQ8IXF9 295 aa15.66■□□□□ 0.1
SNX1-203ENST00000558040 ZNF321PQ8N8H1 164 aa15.66■□□□□ 0.1
SNX1-203ENST00000558040 NFAM1Q8NET5 270 aaPredicted RBP15.66■□□□□ 0.1
SNX1-203ENST00000558040 OR52E4Q8NGH9 312 aa15.66■□□□□ 0.1
SNX1-203ENST00000558040 CDS1Q92903 461 aa15.66■□□□□ 0.1
SNX1-203ENST00000558040 TMEM19Q96HH6 336 aa15.66■□□□□ 0.1
SNX1-203ENST00000558040 BTBD9Q96Q07 612 aa15.66■□□□□ 0.1
SNX1-203ENST00000558040 TRNT1Q96Q11 434 aaKnown RBP15.66■□□□□ 0.1
SNX1-203ENST00000558040 BTBD2Q9BX70 525 aa15.66■□□□□ 0.1
SNX1-203ENST00000558040 ITPAQ9BY32 194 aa15.66■□□□□ 0.1
SNX1-203ENST00000558040 SEMA4CQ9C0C4 833 aa15.66■□□□□ 0.1
SNX1-203ENST00000558040 KLK13Q9UKR3 277 aa15.66■□□□□ 0.1
SNX1-203ENST00000558040 CNOT1A5YKK6 2376 aaKnown RBP15.65■□□□□ 0.1
SNX1-203ENST00000558040 NSG1A0A0A6YYJ2 146 aa15.65■□□□□ 0.1
SNX1-203ENST00000558040 C2orf92A0A1B0GVN3 265 aa15.65■□□□□ 0.1
SNX1-203ENST00000558040 A8MVJ9 347 aa15.65■□□□□ 0.1
SNX1-203ENST00000558040 NME6O75414 186 aaPredicted RBP15.65■□□□□ 0.1
SNX1-203ENST00000558040 IFNA14P01570 189 aa15.65■□□□□ 0.1
SNX1-203ENST00000558040 COX6A1P12074 109 aa15.65■□□□□ 0.1
SNX1-203ENST00000558040 ATP6V1B2P21281 511 aa15.65■□□□□ 0.1
SNX1-203ENST00000558040 F8A1P23610 371 aa15.65■□□□□ 0.1
SNX1-203ENST00000558040 PLA2G5P39877 138 aa15.65■□□□□ 0.1
SNX1-203ENST00000558040 PPICP45877 212 aa15.65■□□□□ 0.1
SNX1-203ENST00000558040 CLCN2P51788 898 aa15.65■□□□□ 0.1
SNX1-203ENST00000558040 GPR143P51810 404 aa15.65■□□□□ 0.1
SNX1-203ENST00000558040 PSPHP78330 225 aa15.65■□□□□ 0.1
SNX1-203ENST00000558040 POU6F2P78424 691 aaPredicted RBP15.65■□□□□ 0.1
SNX1-203ENST00000558040 PSG6Q00889 435 aa15.65■□□□□ 0.1
SNX1-203ENST00000558040 EBPQ15125 230 aaKnown RBP15.65■□□□□ 0.1
SNX1-203ENST00000558040 ARHGAP11BQ3KRB8 267 aa15.65■□□□□ 0.1
SNX1-203ENST00000558040 TBC1D25Q3MII6 688 aa15.65■□□□□ 0.1
SNX1-203ENST00000558040 KIRREL2Q6UWL6 708 aa15.65■□□□□ 0.1
SNX1-203ENST00000558040 HSDL2Q6YN16 418 aa15.65■□□□□ 0.1
SNX1-203ENST00000558040 NDUFAF7Q7L592 441 aa15.65■□□□□ 0.1
SNX1-203ENST00000558040 PPP1R32Q7Z5V6 425 aa15.65■□□□□ 0.1
SNX1-203ENST00000558040 PATL1Q86TB9 770 aaKnown RBP15.65■□□□□ 0.1
SNX1-203ENST00000558040 SPPL2CQ8IUH8 684 aa15.65■□□□□ 0.1
SNX1-203ENST00000558040 EID3Q8N140 333 aa15.65■□□□□ 0.1
SNX1-203ENST00000558040 CHDHQ8NE62 594 aaPredicted RBP15.65■□□□□ 0.1
SNX1-203ENST00000558040 OR11G2Q8NGC1 345 aa15.65■□□□□ 0.1
SNX1-203ENST00000558040 OR8K3Q8NH51 312 aa15.65■□□□□ 0.1
SNX1-203ENST00000558040 BBS10Q8TAM1 723 aa15.65■□□□□ 0.1
SNX1-203ENST00000558040 STMN2Q93045 179 aa15.65■□□□□ 0.1
SNX1-203ENST00000558040 RSRC1Q96IZ7 334 aaKnown RBP15.65■□□□□ 0.1
SNX1-203ENST00000558040 RNF145Q96MT1 663 aa15.65■□□□□ 0.1
SNX1-203ENST00000558040 IP6K3Q96PC2 410 aa15.65■□□□□ 0.1
SNX1-203ENST00000558040 GAL3ST4Q96RP7 486 aa15.65■□□□□ 0.1
SNX1-203ENST00000558040 OR10H1Q9Y4A9 318 aa15.65■□□□□ 0.1
SNX1-203ENST00000558040 CCDC88CQ9P219 2028 aa15.65■□□□□ 0.1
SNX1-203ENST00000558040 FRG2CA6NGY1 282 aa15.64■□□□□ 0.09
SNX1-203ENST00000558040 A8MUI8 341 aa15.64■□□□□ 0.09
SNX1-203ENST00000558040 PEX12O00623 359 aa15.64■□□□□ 0.09
SNX1-203ENST00000558040 ICAM2P13598 275 aa15.64■□□□□ 0.09
SNX1-203ENST00000558040 DRD5P21918 477 aa15.64■□□□□ 0.09
SNX1-203ENST00000558040 KDELR2P33947 212 aa15.64■□□□□ 0.09
SNX1-203ENST00000558040 TRHRP34981 398 aaPredicted RBP15.64■□□□□ 0.09
SNX1-203ENST00000558040 CCNIQ14094 377 aa15.64■□□□□ 0.09
SNX1-203ENST00000558040 ELOAQ14241 798 aaKnown RBP15.64■□□□□ 0.09
SNX1-203ENST00000558040 SYPL1Q16563 259 aa15.64■□□□□ 0.09
SNX1-203ENST00000558040 BTBD16Q32M84 506 aa15.64■□□□□ 0.09
SNX1-203ENST00000558040 LRRC23Q53EV4 343 aaPredicted RBP15.64■□□□□ 0.09
SNX1-203ENST00000558040 DCST2Q5T1A1 773 aa15.64■□□□□ 0.09
SNX1-203ENST00000558040 PLAG1Q6DJT9 500 aa15.64■□□□□ 0.09
SNX1-203ENST00000558040 LRRC74BQ6ZQY2 392 aa15.64■□□□□ 0.09
SNX1-203ENST00000558040 CCDC80Q76M96 950 aa15.64■□□□□ 0.09
SNX1-203ENST00000558040 KRT73Q86Y46 540 aa15.64■□□□□ 0.09
SNX1-203ENST00000558040 C9orf40Q8IXQ3 194 aa15.64■□□□□ 0.09
SNX1-203ENST00000558040 ANKFN1Q8N957 763 aa15.64■□□□□ 0.09
SNX1-203ENST00000558040 GOLM1Q8NBJ4 401 aa15.64■□□□□ 0.09
SNX1-203ENST00000558040 APCDD1LQ8NCL9 501 aa15.64■□□□□ 0.09
SNX1-203ENST00000558040 C17orf47Q8NEP4 570 aa15.64■□□□□ 0.09
SNX1-203ENST00000558040 OR5L2Q8NGL0 311 aa15.64■□□□□ 0.09
SNX1-203ENST00000558040 M1APQ8TC57 530 aa15.64■□□□□ 0.09
SNX1-203ENST00000558040 PIK3R3Q92569 461 aa15.64■□□□□ 0.09
SNX1-203ENST00000558040 LCORQ96JN0 433 aaPredicted RBP15.64■□□□□ 0.09
SNX1-203ENST00000558040 ZNF607Q96SK3 696 aa15.64■□□□□ 0.09
SNX1-203ENST00000558040 MESP1Q9BRJ9 268 aa15.64■□□□□ 0.09
SNX1-203ENST00000558040 WWTR1Q9GZV5 400 aa15.64■□□□□ 0.09
SNX1-203ENST00000558040 CACYBPQ9HB71 228 aaKnown RBP15.64■□□□□ 0.09
SNX1-203ENST00000558040 BCL2L10Q9HD36 194 aa15.64■□□□□ 0.09
SNX1-203ENST00000558040 POLE3Q9NRF9 147 aa15.64■□□□□ 0.09
SNX1-203ENST00000558040 RPS6KA6Q9UK32 745 aa15.64■□□□□ 0.09
SNX1-203ENST00000558040 MRTO4Q9UKD2 239 aaKnown RBP15.64■□□□□ 0.09
SNX1-203ENST00000558040 SAMD4AQ9UPU9 718 aaKnown RBP15.64■□□□□ 0.09
SNX1-203ENST00000558040 DTX4Q9Y2E6 619 aa15.64■□□□□ 0.09
SNX1-203ENST00000558040 GPR55Q9Y2T6 319 aaPredicted RBP15.64■□□□□ 0.09
SNX1-203ENST00000558040 KCNE3Q9Y6H6 103 aa15.64■□□□□ 0.09
SNX1-203ENST00000558040 A0A0G2JPF8 293 aa15.63■□□□□ 0.09
SNX1-203ENST00000558040 TRBV11-1A0A0K0K1C0 115 aa15.63■□□□□ 0.09
SNX1-203ENST00000558040 HNRNPCL2B2RXH8 293 aa15.63■□□□□ 0.09
SNX1-203ENST00000558040 HNRNPCL3B7ZW38 293 aa15.63■□□□□ 0.09
SNX1-203ENST00000558040 STX11O75558 287 aa15.63■□□□□ 0.09
SNX1-203ENST00000558040 ZFAND5O76080 213 aa15.63■□□□□ 0.09
SNX1-203ENST00000558040 PGM3O95394 542 aa15.63■□□□□ 0.09
SNX1-203ENST00000558040 H6PDO95479 791 aa15.63■□□□□ 0.09
SNX1-203ENST00000558040 HPP00738 406 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms