RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 ZNF628Q5EBL2 1059 aa14.46□□□□□ -0.09
SCFD1-224ENST00000557713 EEF1A1P5Q5VTE0 462 aa14.46□□□□□ -0.09
SCFD1-224ENST00000557713 IFNEQ86WN2 208 aa14.46□□□□□ -0.09
SCFD1-224ENST00000557713 CCDC116Q8IYX3 515 aa14.46□□□□□ -0.09
SCFD1-224ENST00000557713 GCNT2Q8N0V5 402 aa14.46□□□□□ -0.09
SCFD1-224ENST00000557713 ZNF675Q8TD23 568 aa14.46□□□□□ -0.09
SCFD1-224ENST00000557713 RNF138Q8WVD3 245 aa14.46□□□□□ -0.09
SCFD1-224ENST00000557713 C18orf12Q96KH6 178 aa14.46□□□□□ -0.09
SCFD1-224ENST00000557713 BTBD9Q96Q07 612 aa14.46□□□□□ -0.09
SCFD1-224ENST00000557713 SMR3AQ99954 134 aa14.46□□□□□ -0.09
SCFD1-224ENST00000557713 FAIM2Q9BWQ8 316 aa14.46□□□□□ -0.09
SCFD1-224ENST00000557713 ACBD3Q9H3P7 528 aa14.46□□□□□ -0.09
SCFD1-224ENST00000557713 BEX4Q9NWD9 120 aaPredicted RBP14.46□□□□□ -0.09
SCFD1-224ENST00000557713 VPS29Q9UBQ0 182 aa14.46□□□□□ -0.09
SCFD1-224ENST00000557713 TRPS1Q9UHF7 1281 aa14.46□□□□□ -0.09
SCFD1-224ENST00000557713 FBXL2Q9UKC9 423 aa14.46□□□□□ -0.09
SCFD1-224ENST00000557713 UTS2RQ9UKP6 389 aa14.46□□□□□ -0.09
SCFD1-224ENST00000557713 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.45□□□□□ -0.1
SCFD1-224ENST00000557713 A8MT66 165 aa14.45□□□□□ -0.1
SCFD1-224ENST00000557713 B4DXG7 233 aa14.45□□□□□ -0.1
SCFD1-224ENST00000557713 HCRTR2O43614 444 aa14.45□□□□□ -0.1
SCFD1-224ENST00000557713 ABCB7O75027 752 aa14.45□□□□□ -0.1
SCFD1-224ENST00000557713 TNFSF13O75888 250 aa14.45□□□□□ -0.1
SCFD1-224ENST00000557713 OR4F21O95013 312 aa14.45□□□□□ -0.1
SCFD1-224ENST00000557713 TGM6O95932 706 aa14.45□□□□□ -0.1
SCFD1-224ENST00000557713 INHBAP08476 426 aa14.45□□□□□ -0.1
SCFD1-224ENST00000557713 DRD2P14416 443 aa14.45□□□□□ -0.1
SCFD1-224ENST00000557713 HSD17B3P37058 310 aa14.45□□□□□ -0.1
SCFD1-224ENST00000557713 CPA2P48052 419 aa14.45□□□□□ -0.1
SCFD1-224ENST00000557713 SERPINB9P50453 376 aa14.45□□□□□ -0.1
SCFD1-224ENST00000557713 GAS1P54826 345 aa14.45□□□□□ -0.1
SCFD1-224ENST00000557713 ETF1P62495 437 aaKnown RBP14.45□□□□□ -0.1
SCFD1-224ENST00000557713 LTBQ06643 244 aa14.45□□□□□ -0.1
SCFD1-224ENST00000557713 BCL2A1Q16548 175 aa14.45□□□□□ -0.1
SCFD1-224ENST00000557713 AAGABQ6PD74 315 aa14.45□□□□□ -0.1
SCFD1-224ENST00000557713 SCIMPQ6UWF3 145 aa14.45□□□□□ -0.1
SCFD1-224ENST00000557713 SYT10Q6XYQ8 523 aa14.45□□□□□ -0.1
SCFD1-224ENST00000557713 CXorf67Q86X51 503 aaPredicted RBP14.45□□□□□ -0.1
SCFD1-224ENST00000557713 MED12Q93074 2177 aa14.45□□□□□ -0.1
SCFD1-224ENST00000557713 ERP27Q96DN0 273 aa14.45□□□□□ -0.1
SCFD1-224ENST00000557713 VSTM2LQ96N03 204 aa14.45□□□□□ -0.1
SCFD1-224ENST00000557713 ADOQ96SZ5 270 aa14.45□□□□□ -0.1
SCFD1-224ENST00000557713 HBEGFQ99075 208 aa14.45□□□□□ -0.1
SCFD1-224ENST00000557713 MRPL46Q9H2W6 279 aaKnown RBP14.45□□□□□ -0.1
SCFD1-224ENST00000557713 ANKRA2Q9H9E1 313 aa14.45□□□□□ -0.1
SCFD1-224ENST00000557713 PACSIN3Q9UKS6 424 aa14.45□□□□□ -0.1
SCFD1-224ENST00000557713 DLGAP4Q9Y2H0 992 aa14.45□□□□□ -0.1
SCFD1-224ENST00000557713 WIF1Q9Y5W5 379 aa14.45□□□□□ -0.1
SCFD1-224ENST00000557713 NAV3Q8IVL0 2385 aa14.44□□□□□ -0.1
SCFD1-224ENST00000557713 MANBAO00462 879 aa14.44□□□□□ -0.1
SCFD1-224ENST00000557713 CASKO14936 926 aa14.44□□□□□ -0.1
SCFD1-224ENST00000557713 NME6O75414 186 aaPredicted RBP14.44□□□□□ -0.1
SCFD1-224ENST00000557713 INHBBP09529 407 aa14.44□□□□□ -0.1
SCFD1-224ENST00000557713 CTAGE8P0CG41 777 aa14.44□□□□□ -0.1
SCFD1-224ENST00000557713 PCYT1AP49585 367 aa14.44□□□□□ -0.1
SCFD1-224ENST00000557713 PNLIPRP2P54317 469 aa14.44□□□□□ -0.1
SCFD1-224ENST00000557713 DIO3P55073 304 aa14.44□□□□□ -0.1
SCFD1-224ENST00000557713 CORO7P57737 925 aa14.44□□□□□ -0.1
SCFD1-224ENST00000557713 B3GALT5-AS1P59052 145 aa14.44□□□□□ -0.1
SCFD1-224ENST00000557713 RAE1P78406 368 aaKnown RBP14.44□□□□□ -0.1
SCFD1-224ENST00000557713 NKX6-1P78426 367 aaPredicted RBP14.44□□□□□ -0.1
SCFD1-224ENST00000557713 EFR3AQ14156 821 aa14.44□□□□□ -0.1
SCFD1-224ENST00000557713 TCHHL1Q5QJ38 904 aaPredicted RBP14.44□□□□□ -0.1
SCFD1-224ENST00000557713 SHEQ5VZ18 495 aa14.44□□□□□ -0.1
SCFD1-224ENST00000557713 OR5M10Q6IEU7 315 aa14.44□□□□□ -0.1
SCFD1-224ENST00000557713 NPSR1Q6W5P4 371 aa14.44□□□□□ -0.1
SCFD1-224ENST00000557713 CTAGE4Q8IX94 777 aa14.44□□□□□ -0.1
SCFD1-224ENST00000557713 KAT2AQ92830 837 aa14.44□□□□□ -0.1
SCFD1-224ENST00000557713 PAFAH2Q99487 392 aa14.44□□□□□ -0.1
SCFD1-224ENST00000557713 CDC42EP4Q9H3Q1 356 aaKnown RBP14.44□□□□□ -0.1
SCFD1-224ENST00000557713 NDRG3Q9UGV2 375 aa14.44□□□□□ -0.1
SCFD1-224ENST00000557713 MCM8Q9UJA3 840 aa14.44□□□□□ -0.1
SCFD1-224ENST00000557713 TESMINQ9Y4I5 508 aa14.44□□□□□ -0.1
SCFD1-224ENST00000557713 A0A1W2PNV4 684 aa14.43□□□□□ -0.1
SCFD1-224ENST00000557713 MSTNO14793 375 aa14.43□□□□□ -0.1
SCFD1-224ENST00000557713 ESRRBO95718 433 aa14.43□□□□□ -0.1
SCFD1-224ENST00000557713 CRHP06850 196 aa14.43□□□□□ -0.1
SCFD1-224ENST00000557713 IL3P08700 152 aa14.43□□□□□ -0.1
SCFD1-224ENST00000557713 HSD3B1P14060 373 aa14.43□□□□□ -0.1
SCFD1-224ENST00000557713 CHN1P15882 459 aa14.43□□□□□ -0.1
SCFD1-224ENST00000557713 GRK2P25098 689 aa14.43□□□□□ -0.1
SCFD1-224ENST00000557713 HSD3B2P26439 372 aa14.43□□□□□ -0.1
SCFD1-224ENST00000557713 DPP4P27487 766 aa14.43□□□□□ -0.1
SCFD1-224ENST00000557713 PSPHP78330 225 aa14.43□□□□□ -0.1
SCFD1-224ENST00000557713 CLCQ05315 142 aa14.43□□□□□ -0.1
SCFD1-224ENST00000557713 FAM27E3Q08E93 113 aa14.43□□□□□ -0.1
SCFD1-224ENST00000557713 C8orf74Q6P047 294 aa14.43□□□□□ -0.1
SCFD1-224ENST00000557713 Q71RC1 249 aaPredicted RBP14.43□□□□□ -0.1
SCFD1-224ENST00000557713 LARP4Q71RC2 724 aaKnown RBP eCLIP14.43□□□□□ -0.1
SCFD1-224ENST00000557713 GRAMD2AQ8IUY3 354 aa14.43□□□□□ -0.1
SCFD1-224ENST00000557713 GBP7Q8N8V2 638 aaPredicted RBP14.43□□□□□ -0.1
SCFD1-224ENST00000557713 OR9A2Q8NGT5 310 aa14.43□□□□□ -0.1
SCFD1-224ENST00000557713 DCAKDQ8WVC6 231 aa14.43□□□□□ -0.1
SCFD1-224ENST00000557713 STARD4Q96DR4 205 aa14.43□□□□□ -0.1
SCFD1-224ENST00000557713 DTNBP1Q96EV8 351 aa14.43□□□□□ -0.1
SCFD1-224ENST00000557713 SFXN2Q96NB2 322 aa14.43□□□□□ -0.1
SCFD1-224ENST00000557713 ZNF180Q9UJW8 692 aa14.43□□□□□ -0.1
SCFD1-224ENST00000557713 TRIM49D1C9J1S8 452 aa14.42□□□□□ -0.1
SCFD1-224ENST00000557713 KRT6AP02538 564 aa14.42□□□□□ -0.1
SCFD1-224ENST00000557713 KRT6BP04259 564 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms