RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 NPAS2Q99743 824 aa13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 PAIP1Q9H074 479 aaKnown RBP13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 NXF5Q9H1B4 397 aaKnown RBP13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 EXD2Q9NVH0 621 aa13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 GID8Q9NWU2 228 aa13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 HPF1Q9NWY4 346 aa13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 LHX6Q9UPM6 363 aa13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 OR10H1Q9Y4A9 318 aa13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 NPFFR2Q9Y5X5 522 aa13.04□□□□□ -0.32
SUPT16H-208ENST00000557652 C15orf38-AP3S2A0A0A6YYH1 394 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 OR6C70A6NIJ9 312 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 C9JVG2 144 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 MASP2O00187 686 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 WWP2O00308 870 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 ATXN7O15265 892 aaPredicted RBP13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 PPM1BO75688 479 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 NADKO95544 446 aaPredicted RBP13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 HOXB9P17482 250 aaPredicted RBP13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 EFNA1P20827 205 aaPredicted RBP13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 MATN1P21941 496 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 ABCD3P28288 659 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 KHKP50053 298 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 PRKAG1P54619 331 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 LASP1Q14847 261 aaKnown RBP13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 INAQ16352 499 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 TRMT5Q32P41 509 aaKnown RBP13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 TBCELQ5QJ74 424 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 ATAD3BQ5T9A4 648 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 AP1ARQ63HQ0 302 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 HACD2Q6Y1H2 254 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 RTL4Q6ZR62 310 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 LINC00696Q6ZRV3 163 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 ASB18Q6ZVZ8 466 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 NUP54Q7Z3B4 507 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 ARPINQ7Z6K5 226 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 THAP3Q8WTV1 239 aaPredicted RBP13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 SLC35A4Q96G79 324 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 MAGED4Q96JG8 741 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 INPP5KQ9BT40 448 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 G6PC3Q9BUM1 346 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 BTBD2Q9BX70 525 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 EFCAB1Q9HAE3 211 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 TPT1P8Q9HAU6 139 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 TIMMDC1Q9NPL8 285 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 POLE3Q9NRF9 147 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 CNIH4Q9P003 139 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 CBLCQ9ULV8 474 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 ERVK-11Q9UQG0 969 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 LIPT1Q9Y234 373 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 DTX4Q9Y2E6 619 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 PCDHB14Q9Y5E9 798 aa13.03□□□□□ -0.32
SUPT16H-208ENST00000557652 ATRXP46100 2492 aa13.02□□□□□ -0.32
SUPT16H-208ENST00000557652 TRBV5-3A0A0A0MS03 114 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 ANKRD33BA6NCL7 494 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 ASPDHA6ND91 283 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 EVPLLA8MZ36 301 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 WDPCPO95876 746 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 FAM87AP0C7U9 286 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 BMP2P12643 396 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 COX4I1P13073 169 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 CD46P15529 392 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 PTGER1P34995 402 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 PIGAP37287 484 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 MAN2A2P49641 1150 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 TNFSF10P50591 281 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 PLCXD2Q0VAA5 305 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 SF3A3Q12874 501 aaKnown RBP eCLIP13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 SNTA1Q13424 505 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 GAB1Q13480 694 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 TUBA3CQ13748 450 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 GNA13Q14344 377 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 KRT72Q14CN4 511 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 ZNF791Q3KP31 576 aaPredicted RBP13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 RPUSD3Q6P087 351 aaKnown RBP13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 TUBA3EQ6PEY2 450 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 SLC2A7Q6PXP3 512 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 Q6ZS92 163 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 DHDDSQ86SQ9 333 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 SNX32Q86XE0 403 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 SLC44A2Q8IWA5 706 aaPredicted RBP13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 CYP4Z2PQ8N1L4 340 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 METTL25Q8N6Q8 603 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 COX18Q8N8Q8 333 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 TMEM178AQ8NBL3 297 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 OR52N2Q8NGI0 321 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 GPR151Q8TDV0 419 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 DIO2Q92813 273 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 DTNBP1Q96EV8 351 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 EQTNQ9NQ60 294 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 NDE1Q9NXR1 346 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 LRFN1Q9P244 771 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 ARMCX1Q9P291 453 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 TP53TG5Q9Y2B4 290 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 ITPR1Q14643 2758 aa13.02□□□□□ -0.33
SUPT16H-208ENST00000557652 TMEM247A6NEH6 219 aa13.01□□□□□ -0.33
SUPT16H-208ENST00000557652 CLIC1O00299 241 aa13.01□□□□□ -0.33
SUPT16H-208ENST00000557652 MRASO14807 208 aa13.01□□□□□ -0.33
SUPT16H-208ENST00000557652 HS6ST1O60243 411 aa13.01□□□□□ -0.33
SUPT16H-208ENST00000557652 IL33O95760 270 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms