RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 FAM106AQ4KMX7 169 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 IQCCQ4KMZ1 466 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 LBHQ53QV2 105 aaPredicted RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 C1orf189Q5VU69 101 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 NKAIN2Q5VXU1 208 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 OR52E8Q6IFG1 317 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 PODNL1Q6PEZ8 512 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 TMEM207Q6UWW9 146 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 TPGS1Q6ZTW0 290 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 USP43Q70EL4 1123 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 BIVMQ86UB2 503 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 CTAGE6Q86UF2 777 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 SERINC5Q86VE9 423 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 TPRA1Q86W33 373 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 HIPK1Q86Z02 1210 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 TBC1D10CQ8IV04 446 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 TDHQ8IZJ6 230 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 SFRP1Q8N474 314 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ANKFN1Q8N957 763 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 RNF149Q8NC42 400 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 SLC37A3Q8NCC5 494 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ZNF397Q8NF99 534 aaPredicted RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 SPATA3Q8NHX4 192 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 LHFPL5Q8TAF8 219 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 MAPK15Q8TD08 544 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 DDI1Q8WTU0 396 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 SLC13A3Q8WWT9 602 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 NR4A3Q92570 626 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 TMEM186Q96B77 213 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 CTRCQ99895 268 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 CCDC77Q9BR77 488 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 IDI2Q9BXS1 227 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 KCNMB3Q9NPA1 279 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 DMAP1Q9NPF5 467 aaPredicted RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 TMEM161AQ9NX61 479 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 COX16Q9P0S2 106 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ICAM5Q9UMF0 924 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 KCNK6Q9Y257 313 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 CBY1Q9Y3M2 126 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 TEX264Q9Y6I9 313 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 CSNK1G3Q9Y6M4 447 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 PBRM1Q86U86 1689 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 TCOF1Q13428 1488 aaKnown RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 RAPGEF2Q9Y4G8 1499 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 NAV1Q8NEY1 1877 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 PCDH11XQ9BZA7 1347 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 WRNQ14191 1432 aaPredicted RBP eCLIP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ADGRL3Q9HAR2 1447 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 C2orf92A0A1B0GVN3 265 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ARGFXA6NJG6 315 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 TMEM210A6NLX4 147 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 GPR89AB7ZAQ6 455 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 PRSS46E5RG02 174 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 LMO7DNF2Z398 122 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 SPECC1L-ADORA2AF8WAN1 911 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 LMX1BO60663 402 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 JAK2O60674 1132 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 AKAP3O75969 853 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 SORBS2O94875 1100 aaKnown RBP1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ZNF432O94892 652 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 PRAMEF12O95522 483 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 CRYZL1O95825 349 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 TGM6O95932 706 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 SERPING1P05155 500 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 CRHP06850 196 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 CTXN2P0C2S0 81 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 GPR89BP0CG08 455 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ODC1P11926 461 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 RPA1P27694 616 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 RORAP35398 523 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ALDH3B1P43353 468 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 MAGEA4P43358 317 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 PITPNBP48739 271 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ATP12AP54707 1039 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ACTBP60709 375 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ACTA2P62736 377 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ACTG1P63261 375 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ACTG2P63267 376 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ACTC1P68032 377 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ACTA1P68133 377 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ENPP2Q13822 863 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 COTL1Q14019 142 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 LY6DQ14210 128 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 LTB4RQ15722 352 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 CDKL4Q5MAI5 379 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 OR5M10Q6IEU7 315 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 RHBDD2Q6NTF9 364 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 METTL7BQ6UX53 244 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 SCARA5Q6ZMJ2 495 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 RTN4RL2Q86UN3 420 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 ITIH5Q86UX2 942 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 VASH2Q86V25 355 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 VPS36Q86VN1 386 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 KLHDC8BQ8IXV7 354 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 CCDC185Q8N715 623 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 SNX31Q8N9S9 440 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 DDHD1Q8NEL9 900 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 STEAP2Q8NFT2 490 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 OR2T34Q8NGX1 318 aa1.46□□□□□ -2.18
HIF1A-212ENST00000557538 EXOC6Q8TAG9 804 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms